RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 UBL5Q9BZL1 73 aa4.47□□□□□ -1.69
VPS41-201ENST00000265745 PRO0461Q9UI25 63 aa4.47□□□□□ -1.69
VPS41-201ENST00000265745 C5orf47Q569G3 176 aa4.45□□□□□ -1.7
VPS41-201ENST00000265745 KRTAP6-3Q3LI67 103 aa4.44□□□□□ -1.7
VPS41-201ENST00000265745 COL5A1-AS1Q5SY13 56 aa4.43□□□□□ -1.7
VPS41-201ENST00000265745 K7EP34 96 aa4.42□□□□□ -1.7
VPS41-201ENST00000265745 C1orf64Q8NEQ6 169 aa4.42□□□□□ -1.7
VPS41-201ENST00000265745 CSAG1Q6PB30 78 aa4.41□□□□□ -1.7
VPS41-201ENST00000265745 S4R3F8 94 aa4.41□□□□□ -1.7
VPS41-201ENST00000265745 FAM236AA0A1B0GUQ0 79 aa4.4□□□□□ -1.71
VPS41-201ENST00000265745 FAM236BA0A1B0GV22 79 aa4.4□□□□□ -1.71
VPS41-201ENST00000265745 LCA10Q71F78 164 aa4.4□□□□□ -1.71
VPS41-201ENST00000265745 TP53AIP1Q9HCN2 124 aa4.4□□□□□ -1.71
VPS41-201ENST00000265745 MT1BP07438 61 aa4.39□□□□□ -1.71
VPS41-201ENST00000265745 SPRR2GQ9BYE4 73 aa4.38□□□□□ -1.71
VPS41-201ENST00000265745 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
VPS41-201ENST00000265745 A6NN06 94 aa4.36□□□□□ -1.71
VPS41-201ENST00000265745 Q5VV11 94 aa4.36□□□□□ -1.71
VPS41-201ENST00000265745 F8W1H4 67 aa4.35□□□□□ -1.71
VPS41-201ENST00000265745 MT3P25713 68 aa4.34□□□□□ -1.71
VPS41-201ENST00000265745 GTF2H5Q6ZYL4 71 aa4.34□□□□□ -1.71
VPS41-201ENST00000265745 CYP4F30PQ9H0H9 118 aa4.34□□□□□ -1.71
VPS41-201ENST00000265745 NEBP20929 6669 aa4.34□□□□□ -1.72
VPS41-201ENST00000265745 KLKP1Q107X0 134 aa4.33□□□□□ -1.72
VPS41-201ENST00000265745 ETDBQ3ZM63 59 aa4.33□□□□□ -1.72
VPS41-201ENST00000265745 A0A087WVE0 104 aa4.3□□□□□ -1.72
VPS41-201ENST00000265745 KRTAP10-5P60370 271 aa4.3□□□□□ -1.72
VPS41-201ENST00000265745 TRAV22A0A0B4J277 110 aa4.28□□□□□ -1.72
VPS41-201ENST00000265745 LOC101927531A0A1B0GV80 90 aa4.28□□□□□ -1.72
VPS41-201ENST00000265745 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
VPS41-201ENST00000265745 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
VPS41-201ENST00000265745 ACYP1P07311 99 aa4.25□□□□□ -1.73
VPS41-201ENST00000265745 IMUPQ9GZP8 106 aa4.24□□□□□ -1.73
VPS41-201ENST00000265745 UQCRQO14949 82 aa4.23□□□□□ -1.73
VPS41-201ENST00000265745 FAM240AA0A1B0GVK7 77 aa4.22□□□□□ -1.73
VPS41-201ENST00000265745 ATP5EP2Q5VTU8 51 aa4.22□□□□□ -1.73
VPS41-201ENST00000265745 H0YAA0 97 aa4.21□□□□□ -1.74
VPS41-201ENST00000265745 ATOX1O00244 68 aa4.21□□□□□ -1.74
VPS41-201ENST00000265745 NDUFC1O43677 76 aa4.21□□□□□ -1.74
VPS41-201ENST00000265745 HIST1H4AP62805 103 aaKnown RBP4.21□□□□□ -1.74
VPS41-201ENST00000265745 H0Y9P7 68 aa4.2□□□□□ -1.74
VPS41-201ENST00000265745 KRTAP5-9P26371 169 aa4.2□□□□□ -1.74
VPS41-201ENST00000265745 KMT2DO14686 5537 aa4.19□□□□□ -1.74
VPS41-201ENST00000265745 A8MUN3 132 aa4.17□□□□□ -1.74
VPS41-201ENST00000265745 ADM2Q7Z4H4 148 aa4.16□□□□□ -1.74
VPS41-201ENST00000265745 KRTAP2-2Q9BYT5 123 aa4.15□□□□□ -1.75
VPS41-201ENST00000265745 LINC00643Q86TS7 51 aa4.14□□□□□ -1.75
VPS41-201ENST00000265745 LINC00208Q96KT6 92 aa4.14□□□□□ -1.75
VPS41-201ENST00000265745 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
VPS41-201ENST00000265745 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
VPS41-201ENST00000265745 MP68P56378 58 aa4.1□□□□□ -1.75
VPS41-201ENST00000265745 MT1XP80297 61 aa4.09□□□□□ -1.75
VPS41-201ENST00000265745 PRO2289Q9P1D8 64 aa4.09□□□□□ -1.75
VPS41-201ENST00000265745 PLAC4Q8WY50 150 aa4.07□□□□□ -1.76
VPS41-201ENST00000265745 P0C880 135 aa4.05□□□□□ -1.76
VPS41-201ENST00000265745 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
VPS41-201ENST00000265745 SPRR2FQ96RM1 72 aa4.04□□□□□ -1.76
VPS41-201ENST00000265745 R4GN34 69 aa4.04□□□□□ -1.76
VPS41-201ENST00000265745 H3BPC8 53 aa4.03□□□□□ -1.76
VPS41-201ENST00000265745 C20orf197Q8N268 126 aa4.03□□□□□ -1.76
VPS41-201ENST00000265745 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
VPS41-201ENST00000265745 DMAC1Q96GE9 116 aa4.02□□□□□ -1.77
VPS41-201ENST00000265745 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
VPS41-201ENST00000265745 M0QZ58 72 aa4.01□□□□□ -1.77
VPS41-201ENST00000265745 A0A1B0GV90 55 aa4□□□□□ -1.77
VPS41-201ENST00000265745 KRTAP12-2P59991 146 aa4□□□□□ -1.77
VPS41-201ENST00000265745 KRTAP8-1Q8IUC2 63 aa4□□□□□ -1.77
VPS41-201ENST00000265745 SPRR2EP22531 72 aa3.99□□□□□ -1.77
VPS41-201ENST00000265745 SPRR2BP35325 72 aa3.99□□□□□ -1.77
VPS41-201ENST00000265745 SPRR2AP35326 72 aa3.99□□□□□ -1.77
VPS41-201ENST00000265745 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
VPS41-201ENST00000265745 SCGB1A1P11684 91 aa3.97□□□□□ -1.77
VPS41-201ENST00000265745 J3QR89 54 aa3.96□□□□□ -1.78
VPS41-201ENST00000265745 LINC01554Q52M75 96 aa3.96□□□□□ -1.78
VPS41-201ENST00000265745 TRAV7A0A075B6U4 112 aa3.94□□□□□ -1.78
VPS41-201ENST00000265745 ACYP2P14621 99 aa3.91□□□□□ -1.78
VPS41-201ENST00000265745 KRTAP10-7P60409 375 aaPredicted RBP3.9□□□□□ -1.79
VPS41-201ENST00000265745 KRTAP10-12P60413 245 aa3.88□□□□□ -1.79
VPS41-201ENST00000265745 KRTAP2-1Q9BYU5 128 aa3.88□□□□□ -1.79
VPS41-201ENST00000265745 V9GYY9 64 aa3.88□□□□□ -1.79
VPS41-201ENST00000265745 SPTSSBQ8NFR3 76 aa3.87□□□□□ -1.79
VPS41-201ENST00000265745 SPRR2DP22532 72 aa3.86□□□□□ -1.79
VPS41-201ENST00000265745 SMIM26A0A096LP01 95 aa3.85□□□□□ -1.79
VPS41-201ENST00000265745 MT-ATP8P03928 68 aa3.85□□□□□ -1.79
VPS41-201ENST00000265745 SMIM20Q8N5G0 67 aa3.84□□□□□ -1.79
VPS41-201ENST00000265745 CHKB-CPT1BH3BT56 60 aa3.82□□□□□ -1.8
VPS41-201ENST00000265745 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
VPS41-201ENST00000265745 SNURFQ9Y675 71 aa3.78□□□□□ -1.8
VPS41-201ENST00000265745 K7ERU9 68 aa3.76□□□□□ -1.81
VPS41-201ENST00000265745 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
VPS41-201ENST00000265745 KRTAP13-4Q3LI77 160 aa3.75□□□□□ -1.81
VPS41-201ENST00000265745 SPANXA2-OT1Q8N9U9 137 aa3.75□□□□□ -1.81
VPS41-201ENST00000265745 A8MU10 97 aa3.72□□□□□ -1.81
VPS41-201ENST00000265745 PSPHP1O15172 72 aa3.71□□□□□ -1.82
VPS41-201ENST00000265745 SERP2Q8N6R1 65 aa3.69□□□□□ -1.82
VPS41-201ENST00000265745 DSTQ03001 7570 aaKnown RBP3.66□□□□□ -1.82
VPS41-201ENST00000265745 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
VPS41-201ENST00000265745 COA5Q86WW8 74 aa3.65□□□□□ -1.83
VPS41-201ENST00000265745 MT1EP04732 61 aa3.63□□□□□ -1.83
VPS41-201ENST00000265745 A0A0D9SG42 100 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms