RNA–Protein interactions for RNA: ENST00000264637.8

THRA-201, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene THRA, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-201ENST00000264637 CRIPTQ9P021 101 aa11.8□□□□□ -0.52
THRA-201ENST00000264637 TNXBP22105 4242 aa11.8□□□□□ -0.52
THRA-201ENST00000264637 RYR2Q92736 4967 aa11.76□□□□□ -0.53
THRA-201ENST00000264637 MYCBP2O75592 4640 aa11.76□□□□□ -0.53
THRA-201ENST00000264637 KRTAP3-3Q9BYR6 98 aa11.75□□□□□ -0.53
THRA-201ENST00000264637 KRTAP10-6P60371 365 aaPredicted RBP11.72□□□□□ -0.53
THRA-201ENST00000264637 KMT2CQ8NEZ4 4911 aaKnown RBP11.71□□□□□ -0.54
THRA-201ENST00000264637 KRTAP13-4Q3LI77 160 aa11.68□□□□□ -0.54
THRA-201ENST00000264637 KRTAP10-8P60410 259 aa11.68□□□□□ -0.54
THRA-201ENST00000264637 A0A0D9SG42 100 aa11.63□□□□□ -0.55
THRA-201ENST00000264637 RPL37P61927 97 aaKnown RBP11.61□□□□□ -0.55
THRA-201ENST00000264637 KRTAP3-2Q9BYR7 98 aa11.61□□□□□ -0.55
THRA-201ENST00000264637 XP32Q5T750 250 aa11.57□□□□□ -0.56
THRA-201ENST00000264637 P0C880 135 aa11.56□□□□□ -0.56
THRA-201ENST00000264637 S4R3F8 94 aa11.54□□□□□ -0.56
THRA-201ENST00000264637 Q5VSD8 79 aa11.48□□□□□ -0.57
THRA-201ENST00000264637 LPAP08519 4548 aa11.46□□□□□ -0.58
THRA-201ENST00000264637 TPRXLQ17RH7 258 aa11.41□□□□□ -0.58
THRA-201ENST00000264637 KRTAP17-1Q9BYP8 105 aa11.39□□□□□ -0.59
THRA-201ENST00000264637 SPINT4Q6UDR6 99 aa11.34□□□□□ -0.59
THRA-201ENST00000264637 RYR1P21817 5038 aa11.33□□□□□ -0.6
THRA-201ENST00000264637 C10orf95Q9H7T3 257 aa11.31□□□□□ -0.6
THRA-201ENST00000264637 KRTAP12-2P59991 146 aa11.31□□□□□ -0.6
THRA-201ENST00000264637 LRP2P98164 4655 aa11.28□□□□□ -0.6
THRA-201ENST00000264637 RYR3Q15413 4870 aa11.26□□□□□ -0.61
THRA-201ENST00000264637 KIAA1109Q2LD37 5005 aa11.23□□□□□ -0.61
THRA-201ENST00000264637 MT1HL1P0DM35 61 aa11.22□□□□□ -0.61
THRA-201ENST00000264637 KRTAP12-1P59990 96 aa11.17□□□□□ -0.62
THRA-201ENST00000264637 KRTAP15-1Q3LI76 137 aa11.16□□□□□ -0.62
THRA-201ENST00000264637 NDUFAF8A1L188 74 aa11.03□□□□□ -0.64
THRA-201ENST00000264637 ABCA13Q86UQ4 5058 aa10.99□□□□□ -0.65
THRA-201ENST00000264637 M0QZ58 72 aa10.97□□□□□ -0.65
THRA-201ENST00000264637 EPPK1P58107 5090 aaKnown RBP10.86□□□□□ -0.67
THRA-201ENST00000264637 R4GN34 69 aa10.75□□□□□ -0.69
THRA-201ENST00000264637 MUC17Q685J3 4493 aa10.71□□□□□ -0.69
THRA-201ENST00000264637 LORP23490 312 aaPredicted RBP10.71□□□□□ -0.69
THRA-201ENST00000264637 KRTAP4-5Q9BYR2 181 aa10.69□□□□□ -0.7
THRA-201ENST00000264637 KRTAP4-1Q9BYQ7 146 aa10.59□□□□□ -0.71
THRA-201ENST00000264637 SEC61BP60468 96 aaKnown RBP10.52□□□□□ -0.72
THRA-201ENST00000264637 PLAC4Q8WY50 150 aa10.43□□□□□ -0.74
THRA-201ENST00000264637 MUC2Q02817 5179 aa10.38□□□□□ -0.75
THRA-201ENST00000264637 KRTAP19-2Q3LHN2 52 aa10.37□□□□□ -0.75
THRA-201ENST00000264637 BIRC6Q9NR09 4857 aa10.37□□□□□ -0.75
THRA-201ENST00000264637 HERC2O95714 4834 aa10.26□□□□□ -0.77
THRA-201ENST00000264637 J3QL48 77 aa10.25□□□□□ -0.77
THRA-201ENST00000264637 CAMK2N1Q7Z7J9 78 aa10.24□□□□□ -0.77
THRA-201ENST00000264637 PP632Q6XCG6 107 aa10.16□□□□□ -0.78
THRA-201ENST00000264637 FLGP20930 4061 aaPredicted RBP10.11□□□□□ -0.79
THRA-201ENST00000264637 LUZP6Q538Z0 58 aa10.08□□□□□ -0.8
THRA-201ENST00000264637 PCLOQ9Y6V0 5065 aa10.03□□□□□ -0.8
THRA-201ENST00000264637 A0A0A0MQY5 61 aa9.96□□□□□ -0.81
THRA-201ENST00000264637 HERC1Q15751 4861 aa9.87□□□□□ -0.83
THRA-201ENST00000264637 FAT4Q6V0I7 4981 aa9.86□□□□□ -0.83
THRA-201ENST00000264637 TNP1P09430 55 aa9.83□□□□□ -0.84
THRA-201ENST00000264637 KRTAP23-1A1A580 65 aa9.73□□□□□ -0.85
THRA-201ENST00000264637 HMCN2Q8NDA2 5059 aa9.71□□□□□ -0.86
THRA-201ENST00000264637 SPRR5A0A1B0GTR4 108 aa9.67□□□□□ -0.86
THRA-201ENST00000264637 LCE2CQ5TA81 110 aa9.66□□□□□ -0.86
THRA-201ENST00000264637 KRTAP19-1Q8IUB9 90 aa9.58□□□□□ -0.88
THRA-201ENST00000264637 SPRR2GQ9BYE4 73 aa9.56□□□□□ -0.88
THRA-201ENST00000264637 RNF213Q63HN8 5207 aa9.47□□□□□ -0.89
THRA-201ENST00000264637 M0R2T5 61 aa9.46□□□□□ -0.89
THRA-201ENST00000264637 LCE3AQ5TA76 89 aa9.38□□□□□ -0.91
THRA-201ENST00000264637 MT1HP80294 61 aa9.37□□□□□ -0.91
THRA-201ENST00000264637 UBR4Q5T4S7 5183 aa9.37□□□□□ -0.91
THRA-201ENST00000264637 MT1FP04733 61 aa9.33□□□□□ -0.92
THRA-201ENST00000264637 KRTAP10-10P60014 251 aa9.3□□□□□ -0.92
THRA-201ENST00000264637 MT2AP02795 61 aa9.29□□□□□ -0.92
THRA-201ENST00000264637 KRTAP9-8Q9BYQ0 159 aa9.2□□□□□ -0.94
THRA-201ENST00000264637 KRTAP19-8Q3LI54 63 aa9.08□□□□□ -0.96
THRA-201ENST00000264637 KRTAP10-5P60370 271 aa9.06□□□□□ -0.96
THRA-201ENST00000264637 KRTAP8-1Q8IUC2 63 aa9.05□□□□□ -0.96
THRA-201ENST00000264637 MT1BP07438 61 aa9.04□□□□□ -0.96
THRA-201ENST00000264637 PRO2289Q9P1D8 64 aa9.04□□□□□ -0.96
THRA-201ENST00000264637 MT1XP80297 61 aa9.03□□□□□ -0.96
THRA-201ENST00000264637 INE1O15225 51 aa8.91□□□□□ -0.98
THRA-201ENST00000264637 KRTAP10-12P60413 245 aa8.89□□□□□ -0.99
THRA-201ENST00000264637 KRTAP12-3P60328 96 aa8.88□□□□□ -0.99
THRA-201ENST00000264637 KRTAP10-7P60409 375 aaPredicted RBP8.85□□□□□ -0.99
THRA-201ENST00000264637 KRTAP9-3Q9BYQ3 159 aa8.79□□□□□ -1
THRA-201ENST00000264637 USH2AO75445 5202 aa8.58□□□□□ -1.04
THRA-201ENST00000264637 KMT2DO14686 5537 aa8.56□□□□□ -1.04
THRA-201ENST00000264637 KRTAP19-5Q3LI72 72 aa8.49□□□□□ -1.05
THRA-201ENST00000264637 LCE2BO14633 110 aa8.45□□□□□ -1.06
THRA-201ENST00000264637 LCE3CQ5T5A8 94 aa8.37□□□□□ -1.07
THRA-201ENST00000264637 KRTAP4-8A0A0G2JLE6 195 aa8.31□□□□□ -1.08
THRA-201ENST00000264637 KRTAP4-8Q9BYQ9 185 aa8.31□□□□□ -1.08
THRA-201ENST00000264637 KRTAP9-6A8MVA2 160 aa8.19□□□□□ -1.1
THRA-201ENST00000264637 LCE2AQ5TA79 106 aaPredicted RBP8.09□□□□□ -1.11
THRA-201ENST00000264637 KRTAP4-7Q9BYR0 210 aa8.07□□□□□ -1.12
THRA-201ENST00000264637 KRTAP19-7Q3SYF9 63 aa8.05□□□□□ -1.12
THRA-201ENST00000264637 KRTAP2-3P0C7H8 128 aa7.86□□□□□ -1.15
THRA-201ENST00000264637 KRTAP2-4Q9BYR9 128 aa7.86□□□□□ -1.15
THRA-201ENST00000264637 KRTAP2-1Q9BYU5 128 aa7.86□□□□□ -1.15
THRA-201ENST00000264637 MT1LQ93083 61 aa7.81□□□□□ -1.16
THRA-201ENST00000264637 MT1EP04732 61 aa7.78□□□□□ -1.16
THRA-201ENST00000264637 SSPOA2VEC9 5147 aa7.74□□□□□ -1.17
THRA-201ENST00000264637 KRTAP9-2Q9BYQ4 174 aa7.71□□□□□ -1.18
THRA-201ENST00000264637 KRTAP19-4Q3LI73 84 aa7.64□□□□□ -1.19
THRA-201ENST00000264637 FSIP2Q5CZC0 6907 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms