RNA–Protein interactions for RNA: ENST00000264263.9

GFM1-201, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5 BASIC

Gene GFM1, Length 3,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-201ENST00000264263 KRTAP13-4Q3LI77 160 aa6.01□□□□□ -1.45
GFM1-201ENST00000264263 LRP1Q07954 4544 aaKnown RBP5.98□□□□□ -1.45
GFM1-201ENST00000264263 KRTAP10-8P60410 259 aa5.95□□□□□ -1.46
GFM1-201ENST00000264263 S4R3F8 94 aa5.94□□□□□ -1.46
GFM1-201ENST00000264263 SACSQ9NZJ4 4579 aa5.93□□□□□ -1.46
GFM1-201ENST00000264263 KRTAP10-6P60371 365 aaPredicted RBP5.91□□□□□ -1.46
GFM1-201ENST00000264263 RPS29P62273 56 aaKnown RBP5.91□□□□□ -1.46
GFM1-201ENST00000264263 FAT3Q8TDW7 4589 aa5.88□□□□□ -1.47
GFM1-201ENST00000264263 KRTAP12-2P59991 146 aa5.87□□□□□ -1.47
GFM1-201ENST00000264263 APOBP04114 4563 aaKnown RBP5.87□□□□□ -1.47
GFM1-201ENST00000264263 KRTAP3-3Q9BYR6 98 aa5.86□□□□□ -1.47
GFM1-201ENST00000264263 HSPG2P98160 4391 aa5.85□□□□□ -1.47
GFM1-201ENST00000264263 KRTAP3-2Q9BYR7 98 aa5.82□□□□□ -1.48
GFM1-201ENST00000264263 XP32Q5T750 250 aa5.8□□□□□ -1.48
GFM1-201ENST00000264263 Q5VSD8 79 aa5.8□□□□□ -1.48
GFM1-201ENST00000264263 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
GFM1-201ENST00000264263 KRTAP10-4P60372 401 aaPredicted RBP5.78□□□□□ -1.48
GFM1-201ENST00000264263 A0A0A0MQY5 61 aa5.75□□□□□ -1.49
GFM1-201ENST00000264263 LPAP08519 4548 aa5.74□□□□□ -1.49
GFM1-201ENST00000264263 KMT2CQ8NEZ4 4911 aaKnown RBP5.72□□□□□ -1.49
GFM1-201ENST00000264263 M0QZ58 72 aa5.72□□□□□ -1.49
GFM1-201ENST00000264263 A0A1B0GVY2 172 aa5.72□□□□□ -1.49
GFM1-201ENST00000264263 PKHD1L1Q86WI1 4243 aa5.71□□□□□ -1.49
GFM1-201ENST00000264263 KRTAP12-1P59990 96 aa5.71□□□□□ -1.49
GFM1-201ENST00000264263 LRP2P98164 4655 aa5.7□□□□□ -1.5
GFM1-201ENST00000264263 LUZP6Q538Z0 58 aa5.69□□□□□ -1.5
GFM1-201ENST00000264263 R4GN34 69 aa5.67□□□□□ -1.5
GFM1-201ENST00000264263 KIAA1109Q2LD37 5005 aa5.65□□□□□ -1.5
GFM1-201ENST00000264263 PLAC4Q8WY50 150 aa5.61□□□□□ -1.51
GFM1-201ENST00000264263 RYR1P21817 5038 aa5.61□□□□□ -1.51
GFM1-201ENST00000264263 KRTAP17-1Q9BYP8 105 aa5.55□□□□□ -1.52
GFM1-201ENST00000264263 TNXBP22105 4242 aa5.55□□□□□ -1.52
GFM1-201ENST00000264263 RYR2Q92736 4967 aa5.55□□□□□ -1.52
GFM1-201ENST00000264263 RYR3Q15413 4870 aa5.55□□□□□ -1.52
GFM1-201ENST00000264263 CAMK2N1Q7Z7J9 78 aa5.55□□□□□ -1.52
GFM1-201ENST00000264263 LORP23490 312 aaPredicted RBP5.5□□□□□ -1.53
GFM1-201ENST00000264263 MT1HL1P0DM35 61 aa5.46□□□□□ -1.54
GFM1-201ENST00000264263 ABCA13Q86UQ4 5058 aa5.44□□□□□ -1.54
GFM1-201ENST00000264263 MUC2Q02817 5179 aa5.4□□□□□ -1.54
GFM1-201ENST00000264263 EPPK1P58107 5090 aaKnown RBP5.38□□□□□ -1.55
GFM1-201ENST00000264263 KRTAP4-5Q9BYR2 181 aa5.36□□□□□ -1.55
GFM1-201ENST00000264263 J3QL48 77 aa5.35□□□□□ -1.55
GFM1-201ENST00000264263 BIRC6Q9NR09 4857 aa5.33□□□□□ -1.56
GFM1-201ENST00000264263 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
GFM1-201ENST00000264263 KRTAP4-1Q9BYQ7 146 aa5.27□□□□□ -1.57
GFM1-201ENST00000264263 PP632Q6XCG6 107 aa5.16□□□□□ -1.58
GFM1-201ENST00000264263 TNP1P09430 55 aa5.15□□□□□ -1.59
GFM1-201ENST00000264263 FAT4Q6V0I7 4981 aa5.11□□□□□ -1.59
GFM1-201ENST00000264263 M0R2T5 61 aa5.1□□□□□ -1.59
GFM1-201ENST00000264263 HERC2O95714 4834 aa5.09□□□□□ -1.6
GFM1-201ENST00000264263 MUC17Q685J3 4493 aa5.06□□□□□ -1.6
GFM1-201ENST00000264263 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
GFM1-201ENST00000264263 PCLOQ9Y6V0 5065 aa4.97□□□□□ -1.61
GFM1-201ENST00000264263 HERC1Q15751 4861 aa4.97□□□□□ -1.61
GFM1-201ENST00000264263 KRTAP19-2Q3LHN2 52 aa4.88□□□□□ -1.63
GFM1-201ENST00000264263 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
GFM1-201ENST00000264263 KRTAP10-10P60014 251 aa4.85□□□□□ -1.63
GFM1-201ENST00000264263 HMCN2Q8NDA2 5059 aa4.84□□□□□ -1.63
GFM1-201ENST00000264263 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
GFM1-201ENST00000264263 UBR4Q5T4S7 5183 aa4.76□□□□□ -1.65
GFM1-201ENST00000264263 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
GFM1-201ENST00000264263 KRTAP19-1Q8IUB9 90 aa4.7□□□□□ -1.66
GFM1-201ENST00000264263 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
GFM1-201ENST00000264263 MT1FP04733 61 aa4.63□□□□□ -1.67
GFM1-201ENST00000264263 LCE2CQ5TA81 110 aa4.62□□□□□ -1.67
GFM1-201ENST00000264263 SPRR2GQ9BYE4 73 aa4.62□□□□□ -1.67
GFM1-201ENST00000264263 KRTAP23-1A1A580 65 aa4.59□□□□□ -1.67
GFM1-201ENST00000264263 KMT2DO14686 5537 aa4.59□□□□□ -1.68
GFM1-201ENST00000264263 MT1HP80294 61 aa4.58□□□□□ -1.68
GFM1-201ENST00000264263 MT2AP02795 61 aa4.58□□□□□ -1.68
GFM1-201ENST00000264263 USH2AO75445 5202 aa4.58□□□□□ -1.68
GFM1-201ENST00000264263 INE1O15225 51 aa4.57□□□□□ -1.68
GFM1-201ENST00000264263 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
GFM1-201ENST00000264263 KRTAP10-12P60413 245 aa4.54□□□□□ -1.68
GFM1-201ENST00000264263 KRTAP10-7P60409 375 aaPredicted RBP4.49□□□□□ -1.69
GFM1-201ENST00000264263 KRTAP8-1Q8IUC2 63 aa4.46□□□□□ -1.7
GFM1-201ENST00000264263 KRTAP10-5P60370 271 aa4.45□□□□□ -1.7
GFM1-201ENST00000264263 MT1XP80297 61 aa4.45□□□□□ -1.7
GFM1-201ENST00000264263 KRTAP9-8Q9BYQ0 159 aa4.44□□□□□ -1.7
GFM1-201ENST00000264263 MT1BP07438 61 aa4.42□□□□□ -1.7
GFM1-201ENST00000264263 FSIP2Q5CZC0 6907 aa4.41□□□□□ -1.7
GFM1-201ENST00000264263 KRTAP19-5Q3LI72 72 aa4.34□□□□□ -1.72
GFM1-201ENST00000264263 KRTAP19-8Q3LI54 63 aa4.32□□□□□ -1.72
GFM1-201ENST00000264263 KRTAP4-8A0A0G2JLE6 195 aa4.31□□□□□ -1.72
GFM1-201ENST00000264263 KRTAP4-8Q9BYQ9 185 aa4.31□□□□□ -1.72
GFM1-201ENST00000264263 KRTAP4-7Q9BYR0 210 aa4.26□□□□□ -1.73
GFM1-201ENST00000264263 KRTAP9-6A0A140TA67 174 aa4.24□□□□□ -1.73
GFM1-201ENST00000264263 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
GFM1-201ENST00000264263 KRTAP9-3Q9BYQ3 159 aa4.22□□□□□ -1.73
GFM1-201ENST00000264263 DSTQ03001 7570 aaKnown RBP4.18□□□□□ -1.74
GFM1-201ENST00000264263 KRTAP9-2Q9BYQ4 174 aa4.17□□□□□ -1.74
GFM1-201ENST00000264263 LCE2BO14633 110 aa4.15□□□□□ -1.75
GFM1-201ENST00000264263 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
GFM1-201ENST00000264263 CRCT1Q9UGL9 99 aa4.14□□□□□ -1.75
GFM1-201ENST00000264263 LCE2DQ5TA82 110 aaPredicted RBP4.12□□□□□ -1.75
GFM1-201ENST00000264263 OBSCNQ5VST9 7968 aa4.11□□□□□ -1.75
GFM1-201ENST00000264263 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
GFM1-201ENST00000264263 FCGBPQ9Y6R7 5405 aaPredicted RBP4.08□□□□□ -1.76
GFM1-201ENST00000264263 LCE2AQ5TA79 106 aaPredicted RBP4.03□□□□□ -1.76
GFM1-201ENST00000264263 MUC12Q9UKN1 5478 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms