RNA–Protein interactions for RNA: ENST00000263932.6

TNFRSF8-201, Transcript of TNF receptor superfamily member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,686 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-201ENST00000263932 KRTAP4-5Q9BYR2 181 aa7.23□□□□□ -1.25
TNFRSF8-201ENST00000263932 KRTAP10-8P60410 259 aa7.22□□□□□ -1.25
TNFRSF8-201ENST00000263932 SEC61BP60468 96 aaKnown RBP7.21□□□□□ -1.25
TNFRSF8-201ENST00000263932 EPPK1P58107 5090 aaKnown RBP7.21□□□□□ -1.26
TNFRSF8-201ENST00000263932 A0A1B0GU33 70 aa7.2□□□□□ -1.26
TNFRSF8-201ENST00000263932 A8MUU9 505 aa7.18□□□□□ -1.26
TNFRSF8-201ENST00000263932 HSPG2P98160 4391 aa7.18□□□□□ -1.26
TNFRSF8-201ENST00000263932 C20orf166-AS1Q96NR2 134 aa7.17□□□□□ -1.26
TNFRSF8-201ENST00000263932 K7ERS5 55 aa7.15□□□□□ -1.27
TNFRSF8-201ENST00000263932 XP32Q5T750 250 aa7.12□□□□□ -1.27
TNFRSF8-201ENST00000263932 ROMO1P60602 79 aa7.1□□□□□ -1.27
TNFRSF8-201ENST00000263932 MT1HL1P0DM35 61 aa7.09□□□□□ -1.27
TNFRSF8-201ENST00000263932 SPINT4Q6UDR6 99 aa7.07□□□□□ -1.28
TNFRSF8-201ENST00000263932 PKHD1L1Q86WI1 4243 aa7.06□□□□□ -1.28
TNFRSF8-201ENST00000263932 RPL37P61927 97 aaKnown RBP7.05□□□□□ -1.28
TNFRSF8-201ENST00000263932 LUZP6Q538Z0 58 aa7.05□□□□□ -1.28
TNFRSF8-201ENST00000263932 H0YAA0 97 aa7.05□□□□□ -1.28
TNFRSF8-201ENST00000263932 COX6B2Q6YFQ2 88 aa7.02□□□□□ -1.29
TNFRSF8-201ENST00000263932 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.29
TNFRSF8-201ENST00000263932 H1FX-AS1Q4G0G2 97 aa7.01□□□□□ -1.29
TNFRSF8-201ENST00000263932 KRTAP25-1Q3LHN0 102 aa6.95□□□□□ -1.3
TNFRSF8-201ENST00000263932 LRP2P98164 4655 aa6.95□□□□□ -1.3
TNFRSF8-201ENST00000263932 LPAP08519 4548 aa6.92□□□□□ -1.3
TNFRSF8-201ENST00000263932 S4R3F8 94 aa6.91□□□□□ -1.3
TNFRSF8-201ENST00000263932 TNXBP22105 4242 aa6.9□□□□□ -1.3
TNFRSF8-201ENST00000263932 NDUFAF8A1L188 74 aa6.9□□□□□ -1.3
TNFRSF8-201ENST00000263932 C10orf95Q9H7T3 257 aa6.9□□□□□ -1.31
TNFRSF8-201ENST00000263932 ABCA13Q86UQ4 5058 aa6.89□□□□□ -1.31
TNFRSF8-201ENST00000263932 HERC2O95714 4834 aa6.88□□□□□ -1.31
TNFRSF8-201ENST00000263932 P0C880 135 aa6.86□□□□□ -1.31
TNFRSF8-201ENST00000263932 TPRXLQ17RH7 258 aa6.83□□□□□ -1.32
TNFRSF8-201ENST00000263932 KRTAP13-4Q3LI77 160 aa6.77□□□□□ -1.33
TNFRSF8-201ENST00000263932 M0QZ58 72 aa6.69□□□□□ -1.34
TNFRSF8-201ENST00000263932 MUC2Q02817 5179 aa6.67□□□□□ -1.34
TNFRSF8-201ENST00000263932 KRTAP3-3Q9BYR6 98 aa6.66□□□□□ -1.34
TNFRSF8-201ENST00000263932 R4GN34 69 aa6.65□□□□□ -1.34
TNFRSF8-201ENST00000263932 HERC1Q15751 4861 aa6.64□□□□□ -1.35
TNFRSF8-201ENST00000263932 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
TNFRSF8-201ENST00000263932 BIRC6Q9NR09 4857 aa6.61□□□□□ -1.35
TNFRSF8-201ENST00000263932 KRTAP12-2P59991 146 aa6.61□□□□□ -1.35
TNFRSF8-201ENST00000263932 KRTAP4-1Q9BYQ7 146 aa6.6□□□□□ -1.35
TNFRSF8-201ENST00000263932 M0R2T5 61 aa6.56□□□□□ -1.36
TNFRSF8-201ENST00000263932 PCLOQ9Y6V0 5065 aa6.56□□□□□ -1.36
TNFRSF8-201ENST00000263932 KRTAP3-2Q9BYR7 98 aa6.53□□□□□ -1.36
TNFRSF8-201ENST00000263932 CAMK2N1Q7Z7J9 78 aa6.51□□□□□ -1.37
TNFRSF8-201ENST00000263932 RNF213Q63HN8 5207 aa6.46□□□□□ -1.37
TNFRSF8-201ENST00000263932 KRTAP12-1P59990 96 aa6.41□□□□□ -1.38
TNFRSF8-201ENST00000263932 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
TNFRSF8-201ENST00000263932 FAT4Q6V0I7 4981 aa6.37□□□□□ -1.39
TNFRSF8-201ENST00000263932 LORP23490 312 aaPredicted RBP6.37□□□□□ -1.39
TNFRSF8-201ENST00000263932 UBR4Q5T4S7 5183 aa6.34□□□□□ -1.39
TNFRSF8-201ENST00000263932 HMCN2Q8NDA2 5059 aa6.23□□□□□ -1.41
TNFRSF8-201ENST00000263932 MUC17Q685J3 4493 aa6.21□□□□□ -1.42
TNFRSF8-201ENST00000263932 KRTAP10-10P60014 251 aa6.14□□□□□ -1.43
TNFRSF8-201ENST00000263932 KRTAP19-2Q3LHN2 52 aa6.09□□□□□ -1.43
TNFRSF8-201ENST00000263932 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
TNFRSF8-201ENST00000263932 PLAC4Q8WY50 150 aa6.07□□□□□ -1.44
TNFRSF8-201ENST00000263932 FLGP20930 4061 aaPredicted RBP6.01□□□□□ -1.45
TNFRSF8-201ENST00000263932 LCE2CQ5TA81 110 aa5.99□□□□□ -1.45
TNFRSF8-201ENST00000263932 MT1HP80294 61 aa5.99□□□□□ -1.45
TNFRSF8-201ENST00000263932 TNP1P09430 55 aa5.92□□□□□ -1.46
TNFRSF8-201ENST00000263932 MT1FP04733 61 aa5.86□□□□□ -1.47
TNFRSF8-201ENST00000263932 MT2AP02795 61 aa5.84□□□□□ -1.47
TNFRSF8-201ENST00000263932 FSIP2Q5CZC0 6907 aa5.77□□□□□ -1.49
TNFRSF8-201ENST00000263932 KRTAP19-1Q8IUB9 90 aa5.75□□□□□ -1.49
TNFRSF8-201ENST00000263932 KRTAP9-8Q9BYQ0 159 aa5.72□□□□□ -1.49
TNFRSF8-201ENST00000263932 USH2AO75445 5202 aa5.68□□□□□ -1.5
TNFRSF8-201ENST00000263932 SPRR2GQ9BYE4 73 aa5.67□□□□□ -1.5
TNFRSF8-201ENST00000263932 PP632Q6XCG6 107 aa5.67□□□□□ -1.5
TNFRSF8-201ENST00000263932 PRO2289Q9P1D8 64 aa5.64□□□□□ -1.51
TNFRSF8-201ENST00000263932 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
TNFRSF8-201ENST00000263932 MT1BP07438 61 aa5.49□□□□□ -1.53
TNFRSF8-201ENST00000263932 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
TNFRSF8-201ENST00000263932 KMT2DO14686 5537 aa5.44□□□□□ -1.54
TNFRSF8-201ENST00000263932 LCE2BO14633 110 aa5.41□□□□□ -1.54
TNFRSF8-201ENST00000263932 KRTAP19-8Q3LI54 63 aa5.41□□□□□ -1.54
TNFRSF8-201ENST00000263932 MT1XP80297 61 aa5.4□□□□□ -1.55
TNFRSF8-201ENST00000263932 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
TNFRSF8-201ENST00000263932 KRTAP10-12P60413 245 aa5.38□□□□□ -1.55
TNFRSF8-201ENST00000263932 LCE2AQ5TA79 106 aaPredicted RBP5.37□□□□□ -1.55
TNFRSF8-201ENST00000263932 KRTAP10-7P60409 375 aaPredicted RBP5.37□□□□□ -1.55
TNFRSF8-201ENST00000263932 LCE2DQ5TA82 110 aaPredicted RBP5.33□□□□□ -1.56
TNFRSF8-201ENST00000263932 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
TNFRSF8-201ENST00000263932 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
TNFRSF8-201ENST00000263932 KRTAP4-8A0A0G2JLE6 195 aa5.23□□□□□ -1.57
TNFRSF8-201ENST00000263932 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
TNFRSF8-201ENST00000263932 INE1O15225 51 aa5.21□□□□□ -1.58
TNFRSF8-201ENST00000263932 DSTQ03001 7570 aaKnown RBP5.15□□□□□ -1.59
TNFRSF8-201ENST00000263932 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
TNFRSF8-201ENST00000263932 KRTAP8-1Q8IUC2 63 aa5.09□□□□□ -1.59
TNFRSF8-201ENST00000263932 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.6
TNFRSF8-201ENST00000263932 SSPOA2VEC9 5147 aa5.08□□□□□ -1.6
TNFRSF8-201ENST00000263932 CRCT1Q9UGL9 99 aa5.07□□□□□ -1.6
TNFRSF8-201ENST00000263932 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
TNFRSF8-201ENST00000263932 FCGBPQ9Y6R7 5405 aaPredicted RBP4.99□□□□□ -1.61
TNFRSF8-201ENST00000263932 KRTAP4-7Q9BYR0 210 aa4.99□□□□□ -1.61
TNFRSF8-201ENST00000263932 MUC12Q9UKN1 5478 aa4.89□□□□□ -1.63
TNFRSF8-201ENST00000263932 LCE3CQ5T5A8 94 aa4.8□□□□□ -1.64
TNFRSF8-201ENST00000263932 KRTAP19-6Q3LI70 58 aa4.78□□□□□ -1.64
TNFRSF8-201ENST00000263932 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms