RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 HYDINQ4G0P3 5121 aa8.32□□□□□ -1.08
PDZRN3-201ENST00000263666 KRTAP10-8P60410 259 aa8.32□□□□□ -1.08
PDZRN3-201ENST00000263666 M0QZ58 72 aa8.31□□□□□ -1.08
PDZRN3-201ENST00000263666 R4GN34 69 aa8.3□□□□□ -1.08
PDZRN3-201ENST00000263666 DYNC1H1Q14204 4646 aaKnown RBP8.29□□□□□ -1.08
PDZRN3-201ENST00000263666 PKHD1P08F94 4074 aa8.25□□□□□ -1.09
PDZRN3-201ENST00000263666 KRTAP13-4Q3LI77 160 aa8.22□□□□□ -1.09
PDZRN3-201ENST00000263666 ALMS1Q8TCU4 4167 aa8.22□□□□□ -1.09
PDZRN3-201ENST00000263666 CAMK2N1Q7Z7J9 78 aa8.17□□□□□ -1.1
PDZRN3-201ENST00000263666 LRP1Q07954 4544 aaKnown RBP8.15□□□□□ -1.11
PDZRN3-201ENST00000263666 KRTAP10-4P60372 401 aaPredicted RBP8.14□□□□□ -1.11
PDZRN3-201ENST00000263666 TPRXLQ17RH7 258 aa8.13□□□□□ -1.11
PDZRN3-201ENST00000263666 KRTAP10-6P60371 365 aaPredicted RBP8.11□□□□□ -1.11
PDZRN3-201ENST00000263666 NDUFAF8A1L188 74 aa8.1□□□□□ -1.11
PDZRN3-201ENST00000263666 KRTAP12-2P59991 146 aa8.09□□□□□ -1.11
PDZRN3-201ENST00000263666 FAT3Q8TDW7 4589 aa8.08□□□□□ -1.12
PDZRN3-201ENST00000263666 SACSQ9NZJ4 4579 aa8.07□□□□□ -1.12
PDZRN3-201ENST00000263666 KRTAP4-5Q9BYR2 181 aa8.06□□□□□ -1.12
PDZRN3-201ENST00000263666 FAT2Q9NYQ8 4349 aa8.05□□□□□ -1.12
PDZRN3-201ENST00000263666 KRTAP3-3Q9BYR6 98 aa8.04□□□□□ -1.12
PDZRN3-201ENST00000263666 APOBP04114 4563 aaKnown RBP8.01□□□□□ -1.13
PDZRN3-201ENST00000263666 MT1HL1P0DM35 61 aa7.99□□□□□ -1.13
PDZRN3-201ENST00000263666 KRTAP3-2Q9BYR7 98 aa7.97□□□□□ -1.13
PDZRN3-201ENST00000263666 LUZP6Q538Z0 58 aa7.96□□□□□ -1.14
PDZRN3-201ENST00000263666 KIAA1109Q2LD37 5005 aa7.95□□□□□ -1.14
PDZRN3-201ENST00000263666 KRTAP12-1P59990 96 aa7.91□□□□□ -1.14
PDZRN3-201ENST00000263666 PKD1P98161 4303 aa7.91□□□□□ -1.14
PDZRN3-201ENST00000263666 RYR1P21817 5038 aa7.91□□□□□ -1.14
PDZRN3-201ENST00000263666 KMT2CQ8NEZ4 4911 aaKnown RBP7.83□□□□□ -1.16
PDZRN3-201ENST00000263666 RYR3Q15413 4870 aa7.78□□□□□ -1.16
PDZRN3-201ENST00000263666 LRP2P98164 4655 aa7.75□□□□□ -1.17
PDZRN3-201ENST00000263666 HSPG2P98160 4391 aa7.72□□□□□ -1.17
PDZRN3-201ENST00000263666 KRTAP17-1Q9BYP8 105 aa7.7□□□□□ -1.18
PDZRN3-201ENST00000263666 RYR2Q92736 4967 aa7.65□□□□□ -1.19
PDZRN3-201ENST00000263666 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
PDZRN3-201ENST00000263666 A0A0A0MQY5 61 aa7.61□□□□□ -1.19
PDZRN3-201ENST00000263666 LORP23490 312 aaPredicted RBP7.61□□□□□ -1.19
PDZRN3-201ENST00000263666 LPAP08519 4548 aa7.54□□□□□ -1.2
PDZRN3-201ENST00000263666 PKHD1L1Q86WI1 4243 aa7.52□□□□□ -1.21
PDZRN3-201ENST00000263666 KRTAP10-10P60014 251 aa7.51□□□□□ -1.21
PDZRN3-201ENST00000263666 TNP1P09430 55 aa7.46□□□□□ -1.21
PDZRN3-201ENST00000263666 KRTAP15-1Q3LI76 137 aa7.46□□□□□ -1.22
PDZRN3-201ENST00000263666 KRTAP4-1Q9BYQ7 146 aa7.41□□□□□ -1.22
PDZRN3-201ENST00000263666 TNXBP22105 4242 aa7.34□□□□□ -1.23
PDZRN3-201ENST00000263666 HERC2O95714 4834 aa7.32□□□□□ -1.24
PDZRN3-201ENST00000263666 EPPK1P58107 5090 aaKnown RBP7.29□□□□□ -1.24
PDZRN3-201ENST00000263666 PP632Q6XCG6 107 aa7.28□□□□□ -1.24
PDZRN3-201ENST00000263666 ABCA13Q86UQ4 5058 aa7.25□□□□□ -1.25
PDZRN3-201ENST00000263666 MUC2Q02817 5179 aa7.19□□□□□ -1.26
PDZRN3-201ENST00000263666 BIRC6Q9NR09 4857 aa7.15□□□□□ -1.27
PDZRN3-201ENST00000263666 PRO2289Q9P1D8 64 aa6.95□□□□□ -1.3
PDZRN3-201ENST00000263666 FAT4Q6V0I7 4981 aa6.91□□□□□ -1.3
PDZRN3-201ENST00000263666 HERC1Q15751 4861 aa6.86□□□□□ -1.31
PDZRN3-201ENST00000263666 RNF213Q63HN8 5207 aa6.84□□□□□ -1.31
PDZRN3-201ENST00000263666 LCE3AQ5TA76 89 aa6.82□□□□□ -1.32
PDZRN3-201ENST00000263666 MT1HP80294 61 aa6.81□□□□□ -1.32
PDZRN3-201ENST00000263666 PCLOQ9Y6V0 5065 aa6.76□□□□□ -1.33
PDZRN3-201ENST00000263666 MUC17Q685J3 4493 aa6.7□□□□□ -1.34
PDZRN3-201ENST00000263666 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
PDZRN3-201ENST00000263666 MT2AP02795 61 aa6.65□□□□□ -1.35
PDZRN3-201ENST00000263666 MT1FP04733 61 aa6.62□□□□□ -1.35
PDZRN3-201ENST00000263666 FLGP20930 4061 aaPredicted RBP6.6□□□□□ -1.35
PDZRN3-201ENST00000263666 UBR4Q5T4S7 5183 aa6.59□□□□□ -1.35
PDZRN3-201ENST00000263666 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
PDZRN3-201ENST00000263666 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
PDZRN3-201ENST00000263666 SPRR2GQ9BYE4 73 aa6.55□□□□□ -1.36
PDZRN3-201ENST00000263666 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
PDZRN3-201ENST00000263666 LCE2CQ5TA81 110 aa6.49□□□□□ -1.37
PDZRN3-201ENST00000263666 HMCN2Q8NDA2 5059 aa6.46□□□□□ -1.38
PDZRN3-201ENST00000263666 KRTAP23-1A1A580 65 aa6.43□□□□□ -1.38
PDZRN3-201ENST00000263666 KRTAP9-8Q9BYQ0 159 aa6.31□□□□□ -1.4
PDZRN3-201ENST00000263666 KRTAP10-7P60409 375 aaPredicted RBP6.3□□□□□ -1.4
PDZRN3-201ENST00000263666 FSIP2Q5CZC0 6907 aa6.29□□□□□ -1.4
PDZRN3-201ENST00000263666 MT1XP80297 61 aa6.24□□□□□ -1.41
PDZRN3-201ENST00000263666 MT1BP07438 61 aa6.24□□□□□ -1.41
PDZRN3-201ENST00000263666 KRTAP8-1Q8IUC2 63 aa6.23□□□□□ -1.41
PDZRN3-201ENST00000263666 KRTAP10-5P60370 271 aa6.22□□□□□ -1.41
PDZRN3-201ENST00000263666 USH2AO75445 5202 aa6.17□□□□□ -1.42
PDZRN3-201ENST00000263666 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
PDZRN3-201ENST00000263666 KRTAP19-5Q3LI72 72 aa6.15□□□□□ -1.42
PDZRN3-201ENST00000263666 KRTAP19-8Q3LI54 63 aa6.14□□□□□ -1.43
PDZRN3-201ENST00000263666 CRCT1Q9UGL9 99 aa6.14□□□□□ -1.43
PDZRN3-201ENST00000263666 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
PDZRN3-201ENST00000263666 KMT2DO14686 5537 aa6.09□□□□□ -1.43
PDZRN3-201ENST00000263666 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
PDZRN3-201ENST00000263666 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
PDZRN3-201ENST00000263666 INE1O15225 51 aa6.03□□□□□ -1.44
PDZRN3-201ENST00000263666 LCE2BO14633 110 aa5.96□□□□□ -1.46
PDZRN3-201ENST00000263666 LCE3CQ5T5A8 94 aa5.93□□□□□ -1.46
PDZRN3-201ENST00000263666 LCE2AQ5TA79 106 aaPredicted RBP5.91□□□□□ -1.46
PDZRN3-201ENST00000263666 KRTAP4-7Q9BYR0 210 aa5.9□□□□□ -1.46
PDZRN3-201ENST00000263666 OBSCNQ5VST9 7968 aa5.8□□□□□ -1.48
PDZRN3-201ENST00000263666 SPRR2FQ96RM1 72 aa5.79□□□□□ -1.48
PDZRN3-201ENST00000263666 DSTQ03001 7570 aaKnown RBP5.75□□□□□ -1.49
PDZRN3-201ENST00000263666 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
PDZRN3-201ENST00000263666 FCGBPQ9Y6R7 5405 aaPredicted RBP5.66□□□□□ -1.5
PDZRN3-201ENST00000263666 KRTAP9-2Q9BYQ4 174 aa5.56□□□□□ -1.52
PDZRN3-201ENST00000263666 KRTAP9-6A8MVA2 160 aa5.54□□□□□ -1.52
PDZRN3-201ENST00000263666 MT1GP13640 62 aa5.53□□□□□ -1.52
PDZRN3-201ENST00000263666 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms