RNA–Protein interactions for RNA: ENST00000262039.8

PIK3C3-201, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PIK3C3, Length 9,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-201ENST00000262039 DMDP11532 3685 aa2.04□□□□□ -2.08
PIK3C3-201ENST00000262039 KRTAP3-3Q9BYR6 98 aa2.04□□□□□ -2.08
PIK3C3-201ENST00000262039 KRTAP3-2Q9BYR7 98 aa2.04□□□□□ -2.08
PIK3C3-201ENST00000262039 CMYA5Q8N3K9 4069 aa2.04□□□□□ -2.08
PIK3C3-201ENST00000262039 LCE3CQ5T5A8 94 aa2.03□□□□□ -2.08
PIK3C3-201ENST00000262039 LAMA5O15230 3695 aa2.02□□□□□ -2.09
PIK3C3-201ENST00000262039 LCE2BO14633 110 aa2.02□□□□□ -2.09
PIK3C3-201ENST00000262039 SPRR2GQ9BYE4 73 aa2.02□□□□□ -2.09
PIK3C3-201ENST00000262039 SMG1Q96Q15 3661 aaKnown RBP2□□□□□ -2.09
PIK3C3-201ENST00000262039 BSNQ9UPA5 3926 aa1.99□□□□□ -2.09
PIK3C3-201ENST00000262039 LCE2CQ5TA81 110 aa1.99□□□□□ -2.09
PIK3C3-201ENST00000262039 LCE3EQ5T5B0 92 aa1.97□□□□□ -2.09
PIK3C3-201ENST00000262039 CSMD1Q96PZ7 3565 aa1.97□□□□□ -2.09
PIK3C3-201ENST00000262039 FBN2P35556 2912 aa1.95□□□□□ -2.1
PIK3C3-201ENST00000262039 KRTAP19-5Q3LI72 72 aa1.95□□□□□ -2.1
PIK3C3-201ENST00000262039 CUBNO60494 3623 aa1.91□□□□□ -2.1
PIK3C3-201ENST00000262039 ALMS1Q8TCU4 4167 aa1.91□□□□□ -2.1
PIK3C3-201ENST00000262039 CSMD2Q7Z408 3487 aa1.91□□□□□ -2.1
PIK3C3-201ENST00000262039 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.1
PIK3C3-201ENST00000262039 KRTAP4-5Q9BYR2 181 aa1.9□□□□□ -2.1
PIK3C3-201ENST00000262039 SVEP1Q4LDE5 3571 aa1.9□□□□□ -2.11
PIK3C3-201ENST00000262039 MT4P47944 62 aa1.89□□□□□ -2.11
PIK3C3-201ENST00000262039 ANK2Q01484 3957 aa1.89□□□□□ -2.11
PIK3C3-201ENST00000262039 MT1HL1P0DM35 61 aa1.87□□□□□ -2.11
PIK3C3-201ENST00000262039 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
PIK3C3-201ENST00000262039 KRTAP17-1Q9BYP8 105 aa1.87□□□□□ -2.11
PIK3C3-201ENST00000262039 ZNF469Q96JG9 3925 aaPredicted RBP1.86□□□□□ -2.11
PIK3C3-201ENST00000262039 LCE2AQ5TA79 106 aaPredicted RBP1.86□□□□□ -2.11
PIK3C3-201ENST00000262039 CSMD3Q7Z407 3707 aa1.86□□□□□ -2.11
PIK3C3-201ENST00000262039 UBR4Q5T4S7 5183 aa1.86□□□□□ -2.11
PIK3C3-201ENST00000262039 PCLOQ9Y6V0 5065 aa1.85□□□□□ -2.11
PIK3C3-201ENST00000262039 MT1GP13640 62 aa1.85□□□□□ -2.11
PIK3C3-201ENST00000262039 DNAH7Q8WXX0 4024 aa1.85□□□□□ -2.11
PIK3C3-201ENST00000262039 MT1HP80294 61 aa1.83□□□□□ -2.12
PIK3C3-201ENST00000262039 LCE1DQ5T752 114 aa1.82□□□□□ -2.12
PIK3C3-201ENST00000262039 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
PIK3C3-201ENST00000262039 LCE1EQ5T753 118 aa1.82□□□□□ -2.12
PIK3C3-201ENST00000262039 LCE1FQ5T754 118 aa1.82□□□□□ -2.12
PIK3C3-201ENST00000262039 LCE1AQ5T7P2 110 aa1.82□□□□□ -2.12
PIK3C3-201ENST00000262039 LCE5AQ5TCM9 118 aa1.82□□□□□ -2.12
PIK3C3-201ENST00000262039 TRRAPQ9Y4A5 3859 aa1.8□□□□□ -2.12
PIK3C3-201ENST00000262039 DNAH6Q9C0G6 4158 aa1.79□□□□□ -2.12
PIK3C3-201ENST00000262039 KMT2AQ03164 3969 aa1.79□□□□□ -2.12
PIK3C3-201ENST00000262039 FRAS1Q86XX4 4008 aa1.79□□□□□ -2.12
PIK3C3-201ENST00000262039 ANK3Q12955 4377 aaKnown RBP1.78□□□□□ -2.12
PIK3C3-201ENST00000262039 DNAH1Q9P2D7 4330 aa1.78□□□□□ -2.12
PIK3C3-201ENST00000262039 DNAH3Q8TD57 4116 aa1.77□□□□□ -2.13
PIK3C3-201ENST00000262039 LYSTQ99698 3801 aa1.77□□□□□ -2.13
PIK3C3-201ENST00000262039 FLGP20930 4061 aaPredicted RBP1.76□□□□□ -2.13
PIK3C3-201ENST00000262039 DNHD1Q96M86 4753 aa1.75□□□□□ -2.13
PIK3C3-201ENST00000262039 HUWE1Q7Z6Z7 4374 aaKnown RBP1.75□□□□□ -2.13
PIK3C3-201ENST00000262039 LCE4AQ5TA78 99 aa1.73□□□□□ -2.13
PIK3C3-201ENST00000262039 MT2AP02795 61 aa1.72□□□□□ -2.13
PIK3C3-201ENST00000262039 PRM1P04553 51 aa1.72□□□□□ -2.13
PIK3C3-201ENST00000262039 DNAH2Q9P225 4427 aa1.72□□□□□ -2.13
PIK3C3-201ENST00000262039 HECTD4Q9Y4D8 3996 aa1.72□□□□□ -2.13
PIK3C3-201ENST00000262039 KRTAP19-8Q3LI54 63 aa1.7□□□□□ -2.14
PIK3C3-201ENST00000262039 BIRC6Q9NR09 4857 aa1.67□□□□□ -2.14
PIK3C3-201ENST00000262039 RYR3Q15413 4870 aa1.67□□□□□ -2.14
PIK3C3-201ENST00000262039 MT1FP04733 61 aa1.67□□□□□ -2.14
PIK3C3-201ENST00000262039 KRTAP20-1Q3LI63 56 aa1.67□□□□□ -2.14
PIK3C3-201ENST00000262039 HYDINQ4G0P3 5121 aa1.65□□□□□ -2.14
PIK3C3-201ENST00000262039 KRTAP19-1Q8IUB9 90 aa1.65□□□□□ -2.15
PIK3C3-201ENST00000262039 VPS13BQ7Z7G8 4022 aa1.63□□□□□ -2.15
PIK3C3-201ENST00000262039 PRKDCP78527 4128 aaKnown RBP1.63□□□□□ -2.15
PIK3C3-201ENST00000262039 RYR2Q92736 4967 aa1.63□□□□□ -2.15
PIK3C3-201ENST00000262039 DYNC2H1Q8NCM8 4307 aaKnown RBP1.61□□□□□ -2.15
PIK3C3-201ENST00000262039 KRTAP4-1Q9BYQ7 146 aa1.6□□□□□ -2.15
PIK3C3-201ENST00000262039 HERC1Q15751 4861 aa1.6□□□□□ -2.15
PIK3C3-201ENST00000262039 EPPK1P58107 5090 aaKnown RBP1.59□□□□□ -2.16
PIK3C3-201ENST00000262039 KMT2CQ8NEZ4 4911 aaKnown RBP1.58□□□□□ -2.16
PIK3C3-201ENST00000262039 KRTAP19-3Q7Z4W3 81 aa1.58□□□□□ -2.16
PIK3C3-201ENST00000262039 DNAH9Q9NYC9 4486 aa1.57□□□□□ -2.16
PIK3C3-201ENST00000262039 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.56□□□□□ -2.16
PIK3C3-201ENST00000262039 KRTAP19-6Q3LI70 58 aa1.56□□□□□ -2.16
PIK3C3-201ENST00000262039 ABCA13Q86UQ4 5058 aa1.56□□□□□ -2.16
PIK3C3-201ENST00000262039 KRTAP4-8A0A0G2JLE6 195 aa1.55□□□□□ -2.16
PIK3C3-201ENST00000262039 KRTAP4-8Q9BYQ9 185 aa1.55□□□□□ -2.16
PIK3C3-201ENST00000262039 PKHD1L1Q86WI1 4243 aa1.54□□□□□ -2.16
PIK3C3-201ENST00000262039 FAT2Q9NYQ8 4349 aa1.54□□□□□ -2.16
PIK3C3-201ENST00000262039 DNAH10Q8IVF4 4471 aa1.54□□□□□ -2.16
PIK3C3-201ENST00000262039 KRTAP4-7Q9BYR0 210 aa1.53□□□□□ -2.16
PIK3C3-201ENST00000262039 DNAH8Q96JB1 4490 aa1.52□□□□□ -2.17
PIK3C3-201ENST00000262039 PKHD1P08F94 4074 aa1.52□□□□□ -2.17
PIK3C3-201ENST00000262039 LOC100996750A0A140TA64 210 aa1.52□□□□□ -2.17
PIK3C3-201ENST00000262039 KRTAP4-6Q9BYQ5 205 aa1.52□□□□□ -2.17
PIK3C3-201ENST00000262039 HERC2O95714 4834 aa1.52□□□□□ -2.17
PIK3C3-201ENST00000262039 KRTAP9-9Q9BYP9 154 aa1.52□□□□□ -2.17
PIK3C3-201ENST00000262039 KRTAP9-6A0A140TA67 174 aa1.52□□□□□ -2.17
PIK3C3-201ENST00000262039 KRTAP9-7A8MTY7 169 aa1.52□□□□□ -2.17
PIK3C3-201ENST00000262039 PLECQ15149 4684 aaKnown RBP1.51□□□□□ -2.17
PIK3C3-201ENST00000262039 KRTAP9-2Q9BYQ4 174 aa1.51□□□□□ -2.17
PIK3C3-201ENST00000262039 MT1LQ93083 61 aa1.5□□□□□ -2.17
PIK3C3-201ENST00000262039 KRTAP19-7Q3SYF9 63 aa1.5□□□□□ -2.17
PIK3C3-201ENST00000262039 VPS13DQ5THJ4 4388 aa1.49□□□□□ -2.17
PIK3C3-201ENST00000262039 MT1XP80297 61 aa1.49□□□□□ -2.17
PIK3C3-201ENST00000262039 STARD9Q9P2P6 4700 aa1.49□□□□□ -2.17
PIK3C3-201ENST00000262039 RNF213Q63HN8 5207 aa1.48□□□□□ -2.17
PIK3C3-201ENST00000262039 PKD1P98161 4303 aa1.47□□□□□ -2.17
PIK3C3-201ENST00000262039 KRTAP4-9Q9BYQ8 210 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms