RNA–Protein interactions for RNA: ENST00000261862.7

THSD4-201, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 5 BASIC

Gene THSD4, Length 3,133 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-201ENST00000261862 KRTAP10-4P60372 401 aaPredicted RBP7.44□□□□□ -1.22
THSD4-201ENST00000261862 A0A1B0GVY2 172 aa7.43□□□□□ -1.22
THSD4-201ENST00000261862 FAT1Q14517 4588 aa7.43□□□□□ -1.22
THSD4-201ENST00000261862 KRTAP21-3Q3LHN1 58 aa7.42□□□□□ -1.22
THSD4-201ENST00000261862 KRTAP3-1Q9BYR8 98 aa7.39□□□□□ -1.23
THSD4-201ENST00000261862 APOBP04114 4563 aaKnown RBP7.34□□□□□ -1.23
THSD4-201ENST00000261862 PKHD1L1Q86WI1 4243 aa7.34□□□□□ -1.23
THSD4-201ENST00000261862 COX6B2Q6YFQ2 88 aa7.33□□□□□ -1.24
THSD4-201ENST00000261862 RPL37P61927 97 aaKnown RBP7.31□□□□□ -1.24
THSD4-201ENST00000261862 CAMK2N1Q7Z7J9 78 aa7.31□□□□□ -1.24
THSD4-201ENST00000261862 A0A0D9SG42 100 aa7.3□□□□□ -1.24
THSD4-201ENST00000261862 KMT2CQ8NEZ4 4911 aaKnown RBP7.21□□□□□ -1.25
THSD4-201ENST00000261862 KRTAP10-8P60410 259 aa7.18□□□□□ -1.26
THSD4-201ENST00000261862 RYR2Q92736 4967 aa7.16□□□□□ -1.26
THSD4-201ENST00000261862 Q5VSD8 79 aa7.15□□□□□ -1.27
THSD4-201ENST00000261862 PLAC4Q8WY50 150 aa7.15□□□□□ -1.27
THSD4-201ENST00000261862 LRP1Q07954 4544 aaKnown RBP7.14□□□□□ -1.27
THSD4-201ENST00000261862 FAT3Q8TDW7 4589 aa7.13□□□□□ -1.27
THSD4-201ENST00000261862 KRTAP13-4Q3LI77 160 aa7.13□□□□□ -1.27
THSD4-201ENST00000261862 XP32Q5T750 250 aa7.09□□□□□ -1.27
THSD4-201ENST00000261862 TNXBP22105 4242 aa7.08□□□□□ -1.28
THSD4-201ENST00000261862 KRTAP3-3Q9BYR6 98 aa7.07□□□□□ -1.28
THSD4-201ENST00000261862 KRTAP3-2Q9BYR7 98 aa7.05□□□□□ -1.28
THSD4-201ENST00000261862 S4R3F8 94 aa7.04□□□□□ -1.28
THSD4-201ENST00000261862 KRTAP10-6P60371 365 aaPredicted RBP7.03□□□□□ -1.28
THSD4-201ENST00000261862 HSPG2P98160 4391 aa7.02□□□□□ -1.28
THSD4-201ENST00000261862 MYCBP2O75592 4640 aa7□□□□□ -1.29
THSD4-201ENST00000261862 PRO2289Q9P1D8 64 aa7□□□□□ -1.29
THSD4-201ENST00000261862 KRTAP12-2P59991 146 aa6.99□□□□□ -1.29
THSD4-201ENST00000261862 RYR3Q15413 4870 aa6.98□□□□□ -1.29
THSD4-201ENST00000261862 KRTAP17-1Q9BYP8 105 aa6.98□□□□□ -1.29
THSD4-201ENST00000261862 R4GN34 69 aa6.94□□□□□ -1.3
THSD4-201ENST00000261862 MT1HL1P0DM35 61 aa6.94□□□□□ -1.3
THSD4-201ENST00000261862 RYR1P21817 5038 aa6.91□□□□□ -1.3
THSD4-201ENST00000261862 KIAA1109Q2LD37 5005 aa6.84□□□□□ -1.31
THSD4-201ENST00000261862 EPPK1P58107 5090 aaKnown RBP6.81□□□□□ -1.32
THSD4-201ENST00000261862 KRTAP12-1P59990 96 aa6.78□□□□□ -1.32
THSD4-201ENST00000261862 LRP2P98164 4655 aa6.75□□□□□ -1.33
THSD4-201ENST00000261862 LPAP08519 4548 aa6.73□□□□□ -1.33
THSD4-201ENST00000261862 M0QZ58 72 aa6.67□□□□□ -1.34
THSD4-201ENST00000261862 KRTAP4-5Q9BYR2 181 aa6.63□□□□□ -1.35
THSD4-201ENST00000261862 ABCA13Q86UQ4 5058 aa6.54□□□□□ -1.36
THSD4-201ENST00000261862 INE1O15225 51 aa6.5□□□□□ -1.37
THSD4-201ENST00000261862 KRTAP4-1Q9BYQ7 146 aa6.47□□□□□ -1.37
THSD4-201ENST00000261862 LORP23490 312 aaPredicted RBP6.44□□□□□ -1.38
THSD4-201ENST00000261862 KRTAP23-1A1A580 65 aa6.43□□□□□ -1.38
THSD4-201ENST00000261862 MUC17Q685J3 4493 aa6.42□□□□□ -1.38
THSD4-201ENST00000261862 HERC2O95714 4834 aa6.34□□□□□ -1.39
THSD4-201ENST00000261862 KRTAP19-2Q3LHN2 52 aa6.33□□□□□ -1.4
THSD4-201ENST00000261862 SPRR5A0A1B0GTR4 108 aa6.32□□□□□ -1.4
THSD4-201ENST00000261862 PCLOQ9Y6V0 5065 aa6.3□□□□□ -1.4
THSD4-201ENST00000261862 HERC1Q15751 4861 aa6.29□□□□□ -1.4
THSD4-201ENST00000261862 PP632Q6XCG6 107 aa6.24□□□□□ -1.41
THSD4-201ENST00000261862 BIRC6Q9NR09 4857 aa6.23□□□□□ -1.41
THSD4-201ENST00000261862 MUC2Q02817 5179 aa6.15□□□□□ -1.43
THSD4-201ENST00000261862 FLGP20930 4061 aaPredicted RBP6.12□□□□□ -1.43
THSD4-201ENST00000261862 RNF213Q63HN8 5207 aa6.07□□□□□ -1.44
THSD4-201ENST00000261862 UBR4Q5T4S7 5183 aa6.03□□□□□ -1.44
THSD4-201ENST00000261862 TNP1P09430 55 aa5.98□□□□□ -1.45
THSD4-201ENST00000261862 LCE2DQ5TA82 110 aaPredicted RBP5.96□□□□□ -1.46
THSD4-201ENST00000261862 LCE2CQ5TA81 110 aa5.95□□□□□ -1.46
THSD4-201ENST00000261862 HMCN2Q8NDA2 5059 aa5.91□□□□□ -1.46
THSD4-201ENST00000261862 M0R2T5 61 aa5.89□□□□□ -1.47
THSD4-201ENST00000261862 SPRR2GQ9BYE4 73 aa5.86□□□□□ -1.47
THSD4-201ENST00000261862 FAT4Q6V0I7 4981 aa5.85□□□□□ -1.47
THSD4-201ENST00000261862 KRTAP19-1Q8IUB9 90 aa5.84□□□□□ -1.47
THSD4-201ENST00000261862 MT1HP80294 61 aa5.8□□□□□ -1.48
THSD4-201ENST00000261862 KRTAP10-10P60014 251 aa5.76□□□□□ -1.49
THSD4-201ENST00000261862 MT2AP02795 61 aa5.72□□□□□ -1.49
THSD4-201ENST00000261862 MT1FP04733 61 aa5.72□□□□□ -1.49
THSD4-201ENST00000261862 KRTAP9-8Q9BYQ0 159 aa5.67□□□□□ -1.5
THSD4-201ENST00000261862 LCE3AQ5TA76 89 aa5.65□□□□□ -1.51
THSD4-201ENST00000261862 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
THSD4-201ENST00000261862 FSIP2Q5CZC0 6907 aa5.54□□□□□ -1.52
THSD4-201ENST00000261862 MT1BP07438 61 aa5.54□□□□□ -1.52
THSD4-201ENST00000261862 KRTAP10-5P60370 271 aa5.51□□□□□ -1.53
THSD4-201ENST00000261862 MT1XP80297 61 aa5.5□□□□□ -1.53
THSD4-201ENST00000261862 KRTAP8-1Q8IUC2 63 aa5.49□□□□□ -1.53
THSD4-201ENST00000261862 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
THSD4-201ENST00000261862 KRTAP10-12P60413 245 aa5.42□□□□□ -1.54
THSD4-201ENST00000261862 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
THSD4-201ENST00000261862 KRTAP10-7P60409 375 aaPredicted RBP5.36□□□□□ -1.55
THSD4-201ENST00000261862 USH2AO75445 5202 aa5.26□□□□□ -1.57
THSD4-201ENST00000261862 LCE2BO14633 110 aa5.21□□□□□ -1.57
THSD4-201ENST00000261862 KRTAP19-5Q3LI72 72 aa5.14□□□□□ -1.59
THSD4-201ENST00000261862 LCE2AQ5TA79 106 aaPredicted RBP5.08□□□□□ -1.6
THSD4-201ENST00000261862 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
THSD4-201ENST00000261862 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
THSD4-201ENST00000261862 KRTAP4-8Q9BYQ9 185 aa5.04□□□□□ -1.6
THSD4-201ENST00000261862 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
THSD4-201ENST00000261862 KMT2DO14686 5537 aa4.99□□□□□ -1.61
THSD4-201ENST00000261862 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
THSD4-201ENST00000261862 KRTAP19-7Q3SYF9 63 aa4.9□□□□□ -1.63
THSD4-201ENST00000261862 KRTAP2-3P0C7H8 128 aa4.88□□□□□ -1.63
THSD4-201ENST00000261862 KRTAP2-4Q9BYR9 128 aa4.88□□□□□ -1.63
THSD4-201ENST00000261862 KRTAP2-1Q9BYU5 128 aa4.88□□□□□ -1.63
THSD4-201ENST00000261862 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
THSD4-201ENST00000261862 KRTAP6-3Q3LI67 103 aa4.83□□□□□ -1.64
THSD4-201ENST00000261862 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
THSD4-201ENST00000261862 LCE1EQ5T753 118 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms