RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 KRTAP13-4Q3LI77 160 aa5.22□□□□□ -1.57
PALB2-201ENST00000261584 KRTAP10-8P60410 259 aa5.22□□□□□ -1.57
PALB2-201ENST00000261584 J3QL48 77 aa5.2□□□□□ -1.58
PALB2-201ENST00000261584 PKHD1P08F94 4074 aa5.18□□□□□ -1.58
PALB2-201ENST00000261584 TPRXLQ17RH7 258 aa5.18□□□□□ -1.58
PALB2-201ENST00000261584 XP32Q5T750 250 aa5.17□□□□□ -1.58
PALB2-201ENST00000261584 KRTAP12-2P59991 146 aa5.15□□□□□ -1.58
PALB2-201ENST00000261584 RPS29P62273 56 aaKnown RBP5.13□□□□□ -1.59
PALB2-201ENST00000261584 VPS13BQ7Z7G8 4022 aa5.13□□□□□ -1.59
PALB2-201ENST00000261584 FAT3Q8TDW7 4589 aa5.12□□□□□ -1.59
PALB2-201ENST00000261584 LUZP6Q538Z0 58 aa5.09□□□□□ -1.59
PALB2-201ENST00000261584 KRTAP10-6P60371 365 aaPredicted RBP5.08□□□□□ -1.6
PALB2-201ENST00000261584 SACSQ9NZJ4 4579 aa5.06□□□□□ -1.6
PALB2-201ENST00000261584 LRP1Q07954 4544 aaKnown RBP5.06□□□□□ -1.6
PALB2-201ENST00000261584 DYNC1H1Q14204 4646 aaKnown RBP5.04□□□□□ -1.6
PALB2-201ENST00000261584 A0A1B0GVY2 172 aa5.02□□□□□ -1.61
PALB2-201ENST00000261584 KRTAP3-3Q9BYR6 98 aa5□□□□□ -1.61
PALB2-201ENST00000261584 KRTAP12-1P59990 96 aa4.99□□□□□ -1.61
PALB2-201ENST00000261584 M0R2T5 61 aa4.98□□□□□ -1.61
PALB2-201ENST00000261584 KRTAP3-2Q9BYR7 98 aa4.97□□□□□ -1.61
PALB2-201ENST00000261584 APOBP04114 4563 aaKnown RBP4.97□□□□□ -1.61
PALB2-201ENST00000261584 KMT2CQ8NEZ4 4911 aaKnown RBP4.96□□□□□ -1.62
PALB2-201ENST00000261584 PLAC4Q8WY50 150 aa4.92□□□□□ -1.62
PALB2-201ENST00000261584 SEC61BP60468 96 aaKnown RBP4.91□□□□□ -1.62
PALB2-201ENST00000261584 KIAA1109Q2LD37 5005 aa4.91□□□□□ -1.62
PALB2-201ENST00000261584 RYR1P21817 5038 aa4.9□□□□□ -1.62
PALB2-201ENST00000261584 KRTAP10-4P60372 401 aaPredicted RBP4.88□□□□□ -1.63
PALB2-201ENST00000261584 PKHD1L1Q86WI1 4243 aa4.88□□□□□ -1.63
PALB2-201ENST00000261584 RYR2Q92736 4967 aa4.86□□□□□ -1.63
PALB2-201ENST00000261584 LRP2P98164 4655 aa4.83□□□□□ -1.64
PALB2-201ENST00000261584 A0A0A0MQY5 61 aa4.83□□□□□ -1.64
PALB2-201ENST00000261584 RYR3Q15413 4870 aa4.82□□□□□ -1.64
PALB2-201ENST00000261584 KRTAP21-3Q3LHN1 58 aa4.81□□□□□ -1.64
PALB2-201ENST00000261584 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
PALB2-201ENST00000261584 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
PALB2-201ENST00000261584 KRTAP4-5Q9BYR2 181 aa4.77□□□□□ -1.65
PALB2-201ENST00000261584 HSPG2P98160 4391 aa4.76□□□□□ -1.65
PALB2-201ENST00000261584 TNXBP22105 4242 aa4.75□□□□□ -1.65
PALB2-201ENST00000261584 MT1HL1P0DM35 61 aa4.75□□□□□ -1.65
PALB2-201ENST00000261584 TNP1P09430 55 aa4.71□□□□□ -1.65
PALB2-201ENST00000261584 LPAP08519 4548 aa4.69□□□□□ -1.66
PALB2-201ENST00000261584 KRTAP17-1Q9BYP8 105 aa4.69□□□□□ -1.66
PALB2-201ENST00000261584 EPPK1P58107 5090 aaKnown RBP4.64□□□□□ -1.67
PALB2-201ENST00000261584 MUC2Q02817 5179 aa4.6□□□□□ -1.67
PALB2-201ENST00000261584 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
PALB2-201ENST00000261584 KRTAP10-10P60014 251 aa4.55□□□□□ -1.68
PALB2-201ENST00000261584 PP632Q6XCG6 107 aa4.54□□□□□ -1.68
PALB2-201ENST00000261584 ABCA13Q86UQ4 5058 aa4.53□□□□□ -1.68
PALB2-201ENST00000261584 HERC2O95714 4834 aa4.4□□□□□ -1.71
PALB2-201ENST00000261584 FAT4Q6V0I7 4981 aa4.4□□□□□ -1.71
PALB2-201ENST00000261584 RNF213Q63HN8 5207 aa4.36□□□□□ -1.71
PALB2-201ENST00000261584 LCE3AQ5TA76 89 aa4.31□□□□□ -1.72
PALB2-201ENST00000261584 PCLOQ9Y6V0 5065 aa4.29□□□□□ -1.72
PALB2-201ENST00000261584 MUC17Q685J3 4493 aa4.28□□□□□ -1.72
PALB2-201ENST00000261584 HERC1Q15751 4861 aa4.25□□□□□ -1.73
PALB2-201ENST00000261584 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
PALB2-201ENST00000261584 HMCN2Q8NDA2 5059 aa4.18□□□□□ -1.74
PALB2-201ENST00000261584 UBR4Q5T4S7 5183 aa4.15□□□□□ -1.75
PALB2-201ENST00000261584 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
PALB2-201ENST00000261584 BIRC6Q9NR09 4857 aa4.12□□□□□ -1.75
PALB2-201ENST00000261584 FLGP20930 4061 aaPredicted RBP4.11□□□□□ -1.75
PALB2-201ENST00000261584 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
PALB2-201ENST00000261584 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
PALB2-201ENST00000261584 MT1FP04733 61 aa4.06□□□□□ -1.76
PALB2-201ENST00000261584 KRTAP19-1Q8IUB9 90 aa4.04□□□□□ -1.76
PALB2-201ENST00000261584 PRO2289Q9P1D8 64 aa4.04□□□□□ -1.76
PALB2-201ENST00000261584 CRCT1Q9UGL9 99 aa4.03□□□□□ -1.76
PALB2-201ENST00000261584 MT2AP02795 61 aa4.02□□□□□ -1.77
PALB2-201ENST00000261584 MT1HP80294 61 aa4.02□□□□□ -1.77
PALB2-201ENST00000261584 USH2AO75445 5202 aa4□□□□□ -1.77
PALB2-201ENST00000261584 KRTAP19-2Q3LHN2 52 aa3.99□□□□□ -1.77
PALB2-201ENST00000261584 SPRR2GQ9BYE4 73 aa3.96□□□□□ -1.78
PALB2-201ENST00000261584 KMT2DO14686 5537 aa3.96□□□□□ -1.78
PALB2-201ENST00000261584 KRTAP10-7P60409 375 aaPredicted RBP3.94□□□□□ -1.78
PALB2-201ENST00000261584 LCE2CQ5TA81 110 aa3.9□□□□□ -1.79
PALB2-201ENST00000261584 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.79
PALB2-201ENST00000261584 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
PALB2-201ENST00000261584 KRTAP19-5Q3LI72 72 aa3.86□□□□□ -1.79
PALB2-201ENST00000261584 DSTQ03001 7570 aaKnown RBP3.85□□□□□ -1.79
PALB2-201ENST00000261584 INE1O15225 51 aa3.85□□□□□ -1.79
PALB2-201ENST00000261584 KRTAP4-8A0A0G2JLE6 195 aa3.84□□□□□ -1.79
PALB2-201ENST00000261584 KRTAP4-8Q9BYQ9 185 aa3.84□□□□□ -1.79
PALB2-201ENST00000261584 MT1XP80297 61 aa3.83□□□□□ -1.8
PALB2-201ENST00000261584 KRTAP8-1Q8IUC2 63 aa3.83□□□□□ -1.8
PALB2-201ENST00000261584 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
PALB2-201ENST00000261584 SPRR5A0A1B0GTR4 108 aa3.82□□□□□ -1.8
PALB2-201ENST00000261584 KRTAP9-8Q9BYQ0 159 aa3.8□□□□□ -1.8
PALB2-201ENST00000261584 MT1BP07438 61 aa3.8□□□□□ -1.8
PALB2-201ENST00000261584 KRTAP4-7Q9BYR0 210 aa3.79□□□□□ -1.8
PALB2-201ENST00000261584 FCGBPQ9Y6R7 5405 aaPredicted RBP3.78□□□□□ -1.8
PALB2-201ENST00000261584 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
PALB2-201ENST00000261584 KRTAP19-8Q3LI54 63 aa3.67□□□□□ -1.82
PALB2-201ENST00000261584 KRTAP9-3Q9BYQ3 159 aa3.61□□□□□ -1.83
PALB2-201ENST00000261584 LCE2BO14633 110 aa3.59□□□□□ -1.83
PALB2-201ENST00000261584 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
PALB2-201ENST00000261584 MT1GP13640 62 aa3.51□□□□□ -1.85
PALB2-201ENST00000261584 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
PALB2-201ENST00000261584 LOC100996750A0A140TA64 210 aa3.51□□□□□ -1.85
PALB2-201ENST00000261584 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
PALB2-201ENST00000261584 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 521.9 ms