RNA–Protein interactions for RNA: ENST00000260604.8

PNPT1-201, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 5

Gene PNPT1, Length 3,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-201ENST00000260604 PKD1P98161 4303 aa4.65□□□□□ -1.67
PNPT1-201ENST00000260604 S4R3F8 94 aa4.65□□□□□ -1.67
PNPT1-201ENST00000260604 APOBP04114 4563 aaKnown RBP4.64□□□□□ -1.67
PNPT1-201ENST00000260604 KRTAP10-4P60372 401 aaPredicted RBP4.62□□□□□ -1.67
PNPT1-201ENST00000260604 XP32Q5T750 250 aa4.62□□□□□ -1.67
PNPT1-201ENST00000260604 KRTAP10-8P60410 259 aa4.61□□□□□ -1.67
PNPT1-201ENST00000260604 KIAA1109Q2LD37 5005 aa4.61□□□□□ -1.67
PNPT1-201ENST00000260604 J3QL48 77 aa4.6□□□□□ -1.67
PNPT1-201ENST00000260604 RPL37P61927 97 aaKnown RBP4.6□□□□□ -1.67
PNPT1-201ENST00000260604 KRTAP21-3Q3LHN1 58 aa4.6□□□□□ -1.67
PNPT1-201ENST00000260604 KRTAP3-3Q9BYR6 98 aa4.58□□□□□ -1.68
PNPT1-201ENST00000260604 KRTAP3-2Q9BYR7 98 aa4.58□□□□□ -1.68
PNPT1-201ENST00000260604 P0C880 135 aa4.56□□□□□ -1.68
PNPT1-201ENST00000260604 RYR1P21817 5038 aa4.53□□□□□ -1.68
PNPT1-201ENST00000260604 RYR3Q15413 4870 aa4.53□□□□□ -1.68
PNPT1-201ENST00000260604 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
PNPT1-201ENST00000260604 KRTAP13-4Q3LI77 160 aa4.49□□□□□ -1.69
PNPT1-201ENST00000260604 KRTAP17-1Q9BYP8 105 aa4.49□□□□□ -1.69
PNPT1-201ENST00000260604 ROMO1P60602 79 aa4.48□□□□□ -1.69
PNPT1-201ENST00000260604 KRTAP25-1Q3LHN0 102 aa4.48□□□□□ -1.69
PNPT1-201ENST00000260604 RYR2Q92736 4967 aa4.48□□□□□ -1.69
PNPT1-201ENST00000260604 M0QZ58 72 aa4.47□□□□□ -1.69
PNPT1-201ENST00000260604 KRTAP4-5Q9BYR2 181 aa4.46□□□□□ -1.7
PNPT1-201ENST00000260604 HSPG2P98160 4391 aa4.46□□□□□ -1.7
PNPT1-201ENST00000260604 LRP2P98164 4655 aa4.45□□□□□ -1.7
PNPT1-201ENST00000260604 R4GN34 69 aa4.45□□□□□ -1.7
PNPT1-201ENST00000260604 KRTAP10-6P60371 365 aaPredicted RBP4.44□□□□□ -1.7
PNPT1-201ENST00000260604 MT1HL1P0DM35 61 aa4.44□□□□□ -1.7
PNPT1-201ENST00000260604 KRTAP12-2P59991 146 aa4.39□□□□□ -1.71
PNPT1-201ENST00000260604 PKHD1L1Q86WI1 4243 aa4.39□□□□□ -1.71
PNPT1-201ENST00000260604 LPAP08519 4548 aa4.38□□□□□ -1.71
PNPT1-201ENST00000260604 SEC61BP60468 96 aaKnown RBP4.37□□□□□ -1.71
PNPT1-201ENST00000260604 CAMK2N1Q7Z7J9 78 aa4.34□□□□□ -1.71
PNPT1-201ENST00000260604 TPRXLQ17RH7 258 aa4.34□□□□□ -1.71
PNPT1-201ENST00000260604 EPPK1P58107 5090 aaKnown RBP4.33□□□□□ -1.72
PNPT1-201ENST00000260604 KRTAP12-1P59990 96 aa4.29□□□□□ -1.72
PNPT1-201ENST00000260604 ABCA13Q86UQ4 5058 aa4.27□□□□□ -1.73
PNPT1-201ENST00000260604 M0R2T5 61 aa4.27□□□□□ -1.73
PNPT1-201ENST00000260604 TNXBP22105 4242 aa4.26□□□□□ -1.73
PNPT1-201ENST00000260604 MUC2Q02817 5179 aa4.25□□□□□ -1.73
PNPT1-201ENST00000260604 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
PNPT1-201ENST00000260604 LORP23490 312 aaPredicted RBP4.23□□□□□ -1.73
PNPT1-201ENST00000260604 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
PNPT1-201ENST00000260604 HERC2O95714 4834 aa4.2□□□□□ -1.74
PNPT1-201ENST00000260604 KRTAP4-1Q9BYQ7 146 aa4.19□□□□□ -1.74
PNPT1-201ENST00000260604 HERC1Q15751 4861 aa4.07□□□□□ -1.76
PNPT1-201ENST00000260604 FAT4Q6V0I7 4981 aa4.05□□□□□ -1.76
PNPT1-201ENST00000260604 RNF213Q63HN8 5207 aa4.03□□□□□ -1.76
PNPT1-201ENST00000260604 PLAC4Q8WY50 150 aa4.03□□□□□ -1.76
PNPT1-201ENST00000260604 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
PNPT1-201ENST00000260604 LCE2BO14633 110 aa4□□□□□ -1.77
PNPT1-201ENST00000260604 KRTAP10-10P60014 251 aa3.98□□□□□ -1.77
PNPT1-201ENST00000260604 TNP1P09430 55 aa3.98□□□□□ -1.77
PNPT1-201ENST00000260604 KRTAP15-1Q3LI76 137 aa3.96□□□□□ -1.78
PNPT1-201ENST00000260604 PCLOQ9Y6V0 5065 aa3.91□□□□□ -1.78
PNPT1-201ENST00000260604 UBR4Q5T4S7 5183 aa3.9□□□□□ -1.79
PNPT1-201ENST00000260604 MUC17Q685J3 4493 aa3.88□□□□□ -1.79
PNPT1-201ENST00000260604 BIRC6Q9NR09 4857 aa3.84□□□□□ -1.79
PNPT1-201ENST00000260604 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
PNPT1-201ENST00000260604 KRTAP19-2Q3LHN2 52 aa3.82□□□□□ -1.8
PNPT1-201ENST00000260604 HMCN2Q8NDA2 5059 aa3.79□□□□□ -1.8
PNPT1-201ENST00000260604 FLGP20930 4061 aaPredicted RBP3.75□□□□□ -1.81
PNPT1-201ENST00000260604 MT1HP80294 61 aa3.74□□□□□ -1.81
PNPT1-201ENST00000260604 MT1FP04733 61 aa3.72□□□□□ -1.81
PNPT1-201ENST00000260604 LCE2AQ5TA79 106 aaPredicted RBP3.72□□□□□ -1.81
PNPT1-201ENST00000260604 LCE2CQ5TA81 110 aa3.72□□□□□ -1.81
PNPT1-201ENST00000260604 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
PNPT1-201ENST00000260604 MT2AP02795 61 aa3.7□□□□□ -1.82
PNPT1-201ENST00000260604 KRTAP19-1Q8IUB9 90 aa3.7□□□□□ -1.82
PNPT1-201ENST00000260604 FSIP2Q5CZC0 6907 aa3.69□□□□□ -1.82
PNPT1-201ENST00000260604 SPRR2GQ9BYE4 73 aa3.64□□□□□ -1.83
PNPT1-201ENST00000260604 USH2AO75445 5202 aa3.62□□□□□ -1.83
PNPT1-201ENST00000260604 KRTAP9-8Q9BYQ0 159 aa3.58□□□□□ -1.84
PNPT1-201ENST00000260604 KRTAP10-12P60413 245 aa3.57□□□□□ -1.84
PNPT1-201ENST00000260604 PRO2289Q9P1D8 64 aa3.54□□□□□ -1.84
PNPT1-201ENST00000260604 KRTAP12-3P60328 96 aa3.54□□□□□ -1.84
PNPT1-201ENST00000260604 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
PNPT1-201ENST00000260604 KMT2DO14686 5537 aa3.51□□□□□ -1.85
PNPT1-201ENST00000260604 MT1BP07438 61 aa3.5□□□□□ -1.85
PNPT1-201ENST00000260604 MT1XP80297 61 aa3.49□□□□□ -1.85
PNPT1-201ENST00000260604 KRTAP10-5P60370 271 aa3.48□□□□□ -1.85
PNPT1-201ENST00000260604 KRTAP23-1A1A580 65 aa3.46□□□□□ -1.86
PNPT1-201ENST00000260604 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
PNPT1-201ENST00000260604 KRTAP9-3Q9BYQ3 159 aa3.42□□□□□ -1.86
PNPT1-201ENST00000260604 KRTAP4-8A0A0G2JLE6 195 aa3.41□□□□□ -1.86
PNPT1-201ENST00000260604 KRTAP4-8Q9BYQ9 185 aa3.41□□□□□ -1.86
PNPT1-201ENST00000260604 KRTAP8-1Q8IUC2 63 aa3.4□□□□□ -1.86
PNPT1-201ENST00000260604 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
PNPT1-201ENST00000260604 LOC100996750A0A140TA64 210 aa3.33□□□□□ -1.88
PNPT1-201ENST00000260604 SPRR5A0A1B0GTR4 108 aa3.33□□□□□ -1.88
PNPT1-201ENST00000260604 KRTAP4-6Q9BYQ5 205 aa3.33□□□□□ -1.88
PNPT1-201ENST00000260604 CRCT1Q9UGL9 99 aa3.31□□□□□ -1.88
PNPT1-201ENST00000260604 DSTQ03001 7570 aaKnown RBP3.31□□□□□ -1.88
PNPT1-201ENST00000260604 KRTAP4-7Q9BYR0 210 aa3.28□□□□□ -1.88
PNPT1-201ENST00000260604 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
PNPT1-201ENST00000260604 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
PNPT1-201ENST00000260604 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
PNPT1-201ENST00000260604 FCGBPQ9Y6R7 5405 aaPredicted RBP3.2□□□□□ -1.9
PNPT1-201ENST00000260604 MUC12Q9UKN1 5478 aa3.14□□□□□ -1.91
PNPT1-201ENST00000260604 SSPOA2VEC9 5147 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms