RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 DNAH11Q96DT5 4516 aa3.09□□□□□ -1.92
BRIP1-201ENST00000259008 A6NN06 94 aa3.08□□□□□ -1.92
BRIP1-201ENST00000259008 FRAS1Q86XX4 4008 aa3.07□□□□□ -1.92
BRIP1-201ENST00000259008 PKD1P98161 4303 aa3.06□□□□□ -1.92
BRIP1-201ENST00000259008 KMT2CQ8NEZ4 4911 aaKnown RBP3.06□□□□□ -1.92
BRIP1-201ENST00000259008 DNAH17Q9UFH2 4485 aa3.06□□□□□ -1.92
BRIP1-201ENST00000259008 DNAH8Q96JB1 4490 aa3.05□□□□□ -1.92
BRIP1-201ENST00000259008 A0A0A0MQY5 61 aa3.05□□□□□ -1.92
BRIP1-201ENST00000259008 FAT2Q9NYQ8 4349 aa3.05□□□□□ -1.92
BRIP1-201ENST00000259008 DNAH6Q9C0G6 4158 aa3.05□□□□□ -1.92
BRIP1-201ENST00000259008 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
BRIP1-201ENST00000259008 KRTAP10-4P60372 401 aaPredicted RBP3.05□□□□□ -1.92
BRIP1-201ENST00000259008 H0YAA0 97 aa3.04□□□□□ -1.92
BRIP1-201ENST00000259008 DNAH5Q8TE73 4624 aa3.04□□□□□ -1.92
BRIP1-201ENST00000259008 PKHD1P08F94 4074 aa3.02□□□□□ -1.93
BRIP1-201ENST00000259008 SACSQ9NZJ4 4579 aa3.01□□□□□ -1.93
BRIP1-201ENST00000259008 LRP1BQ9NZR2 4599 aa3□□□□□ -1.93
BRIP1-201ENST00000259008 PP632Q6XCG6 107 aa3□□□□□ -1.93
BRIP1-201ENST00000259008 KRTAP12-2P59991 146 aa2.98□□□□□ -1.93
BRIP1-201ENST00000259008 RYR2Q92736 4967 aa2.97□□□□□ -1.93
BRIP1-201ENST00000259008 KRTAP3-1Q9BYR8 98 aa2.96□□□□□ -1.94
BRIP1-201ENST00000259008 RYR3Q15413 4870 aa2.95□□□□□ -1.94
BRIP1-201ENST00000259008 CRCT1Q9UGL9 99 aa2.91□□□□□ -1.94
BRIP1-201ENST00000259008 VPS13BQ7Z7G8 4022 aa2.9□□□□□ -1.94
BRIP1-201ENST00000259008 LORP23490 312 aaPredicted RBP2.89□□□□□ -1.95
BRIP1-201ENST00000259008 DYNC1H1Q14204 4646 aaKnown RBP2.88□□□□□ -1.95
BRIP1-201ENST00000259008 KRTAP12-1P59990 96 aa2.87□□□□□ -1.95
BRIP1-201ENST00000259008 KRTAP13-4Q3LI77 160 aa2.87□□□□□ -1.95
BRIP1-201ENST00000259008 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
BRIP1-201ENST00000259008 APOBP04114 4563 aaKnown RBP2.86□□□□□ -1.95
BRIP1-201ENST00000259008 KRTAP15-1Q3LI76 137 aa2.85□□□□□ -1.95
BRIP1-201ENST00000259008 FAT1Q14517 4588 aa2.85□□□□□ -1.95
BRIP1-201ENST00000259008 KIAA1109Q2LD37 5005 aa2.83□□□□□ -1.96
BRIP1-201ENST00000259008 KRTAP10-12P60413 245 aa2.82□□□□□ -1.96
BRIP1-201ENST00000259008 MT1HP80294 61 aa2.82□□□□□ -1.96
BRIP1-201ENST00000259008 PKHD1L1Q86WI1 4243 aa2.82□□□□□ -1.96
BRIP1-201ENST00000259008 KRTAP4-1Q9BYQ7 146 aa2.81□□□□□ -1.96
BRIP1-201ENST00000259008 EPPK1P58107 5090 aaKnown RBP2.81□□□□□ -1.96
BRIP1-201ENST00000259008 RYR1P21817 5038 aa2.81□□□□□ -1.96
BRIP1-201ENST00000259008 KRTAP10-6P60371 365 aaPredicted RBP2.8□□□□□ -1.96
BRIP1-201ENST00000259008 KRTAP17-1Q9BYP8 105 aa2.78□□□□□ -1.96
BRIP1-201ENST00000259008 KRTAP3-3Q9BYR6 98 aa2.78□□□□□ -1.96
BRIP1-201ENST00000259008 KRTAP8-1Q8IUC2 63 aa2.78□□□□□ -1.96
BRIP1-201ENST00000259008 LRP1Q07954 4544 aaKnown RBP2.77□□□□□ -1.97
BRIP1-201ENST00000259008 MYCBP2O75592 4640 aa2.77□□□□□ -1.97
BRIP1-201ENST00000259008 HSPG2P98160 4391 aa2.74□□□□□ -1.97
BRIP1-201ENST00000259008 ABCA13Q86UQ4 5058 aa2.73□□□□□ -1.97
BRIP1-201ENST00000259008 TNXBP22105 4242 aa2.72□□□□□ -1.97
BRIP1-201ENST00000259008 FAT3Q8TDW7 4589 aa2.72□□□□□ -1.97
BRIP1-201ENST00000259008 KRTAP3-2Q9BYR7 98 aa2.71□□□□□ -1.98
BRIP1-201ENST00000259008 MT2AP02795 61 aa2.69□□□□□ -1.98
BRIP1-201ENST00000259008 LCE3AQ5TA76 89 aa2.68□□□□□ -1.98
BRIP1-201ENST00000259008 PCLOQ9Y6V0 5065 aa2.68□□□□□ -1.98
BRIP1-201ENST00000259008 KRTAP12-3P60328 96 aa2.66□□□□□ -1.98
BRIP1-201ENST00000259008 SPRR2FQ96RM1 72 aa2.66□□□□□ -1.98
BRIP1-201ENST00000259008 MT1FP04733 61 aa2.65□□□□□ -1.98
BRIP1-201ENST00000259008 HERC2O95714 4834 aa2.63□□□□□ -1.99
BRIP1-201ENST00000259008 LRP2P98164 4655 aa2.62□□□□□ -1.99
BRIP1-201ENST00000259008 BIRC6Q9NR09 4857 aa2.6□□□□□ -1.99
BRIP1-201ENST00000259008 LPAP08519 4548 aa2.58□□□□□ -2
BRIP1-201ENST00000259008 HERC1Q15751 4861 aa2.57□□□□□ -2
BRIP1-201ENST00000259008 SPRR2EP22531 72 aa2.57□□□□□ -2
BRIP1-201ENST00000259008 SPRR2BP35325 72 aa2.57□□□□□ -2
BRIP1-201ENST00000259008 SPRR2AP35326 72 aa2.57□□□□□ -2
BRIP1-201ENST00000259008 MUC2Q02817 5179 aa2.53□□□□□ -2
BRIP1-201ENST00000259008 SPRR2GQ9BYE4 73 aa2.53□□□□□ -2
BRIP1-201ENST00000259008 HMCN2Q8NDA2 5059 aa2.53□□□□□ -2
BRIP1-201ENST00000259008 KRTAP23-1A1A580 65 aa2.52□□□□□ -2.01
BRIP1-201ENST00000259008 KRTAP10-7P60409 375 aaPredicted RBP2.51□□□□□ -2.01
BRIP1-201ENST00000259008 KRTAP10-5P60370 271 aa2.5□□□□□ -2.01
BRIP1-201ENST00000259008 KRTAP19-5Q3LI72 72 aa2.48□□□□□ -2.01
BRIP1-201ENST00000259008 SPRR2DP22532 72 aa2.48□□□□□ -2.01
BRIP1-201ENST00000259008 KRTAP19-1Q8IUB9 90 aa2.47□□□□□ -2.01
BRIP1-201ENST00000259008 MUC17Q685J3 4493 aa2.47□□□□□ -2.01
BRIP1-201ENST00000259008 KRTAP9-2Q9BYQ4 174 aa2.46□□□□□ -2.02
BRIP1-201ENST00000259008 RNF213Q63HN8 5207 aa2.46□□□□□ -2.02
BRIP1-201ENST00000259008 UBR4Q5T4S7 5183 aa2.45□□□□□ -2.02
BRIP1-201ENST00000259008 FAT4Q6V0I7 4981 aa2.43□□□□□ -2.02
BRIP1-201ENST00000259008 KRTAP9-8Q9BYQ0 159 aa2.42□□□□□ -2.02
BRIP1-201ENST00000259008 LCE2BO14633 110 aa2.4□□□□□ -2.02
BRIP1-201ENST00000259008 LCE2CQ5TA81 110 aa2.39□□□□□ -2.03
BRIP1-201ENST00000259008 KRTAP19-2Q3LHN2 52 aa2.38□□□□□ -2.03
BRIP1-201ENST00000259008 FLGP20930 4061 aaPredicted RBP2.38□□□□□ -2.03
BRIP1-201ENST00000259008 KRTAP9-6A0A140TA67 174 aa2.37□□□□□ -2.03
BRIP1-201ENST00000259008 KRTAP9-3Q9BYQ3 159 aa2.37□□□□□ -2.03
BRIP1-201ENST00000259008 KRTAP19-8Q3LI54 63 aa2.36□□□□□ -2.03
BRIP1-201ENST00000259008 KRTAP4-8A0A0G2JLE6 195 aa2.34□□□□□ -2.03
BRIP1-201ENST00000259008 MT1BP07438 61 aa2.34□□□□□ -2.03
BRIP1-201ENST00000259008 KRTAP4-8Q9BYQ9 185 aa2.34□□□□□ -2.03
BRIP1-201ENST00000259008 MT1XP80297 61 aa2.34□□□□□ -2.03
BRIP1-201ENST00000259008 LCE3CQ5T5A8 94 aa2.33□□□□□ -2.04
BRIP1-201ENST00000259008 MT1GP13640 62 aa2.3□□□□□ -2.04
BRIP1-201ENST00000259008 LCE3BQ5TA77 95 aa2.26□□□□□ -2.05
BRIP1-201ENST00000259008 LCE2DQ5TA82 110 aaPredicted RBP2.26□□□□□ -2.05
BRIP1-201ENST00000259008 INE1O15225 51 aa2.25□□□□□ -2.05
BRIP1-201ENST00000259008 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
BRIP1-201ENST00000259008 MT4P47944 62 aa2.23□□□□□ -2.05
BRIP1-201ENST00000259008 LCE2AQ5TA79 106 aaPredicted RBP2.21□□□□□ -2.06
BRIP1-201ENST00000259008 KRTAP9-7A8MTY7 169 aa2.2□□□□□ -2.06
BRIP1-201ENST00000259008 KRTAP19-6Q3LI70 58 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms