RNA–Protein interactions for RNA: ENST00000257868.9

GDF11-201, Transcript of growth differentiation factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GDF11, Length 8,657 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF11-201ENST00000257868 CSMD3Q7Z407 3707 aa5.51□□□□□ -1.53
GDF11-201ENST00000257868 SPRR2EP22531 72 aa5.49□□□□□ -1.53
GDF11-201ENST00000257868 SPRR2BP35325 72 aa5.49□□□□□ -1.53
GDF11-201ENST00000257868 SPRR2AP35326 72 aa5.49□□□□□ -1.53
GDF11-201ENST00000257868 KRTAP12-4P60329 112 aa5.48□□□□□ -1.53
GDF11-201ENST00000257868 TRRAPQ9Y4A5 3859 aa5.42□□□□□ -1.54
GDF11-201ENST00000257868 MT1HP80294 61 aa5.39□□□□□ -1.55
GDF11-201ENST00000257868 MT2AP02795 61 aa5.32□□□□□ -1.56
GDF11-201ENST00000257868 SPRR2DP22532 72 aa5.31□□□□□ -1.56
GDF11-201ENST00000257868 CSMD2Q7Z408 3487 aa5.31□□□□□ -1.56
GDF11-201ENST00000257868 MT1GP13640 62 aa5.28□□□□□ -1.56
GDF11-201ENST00000257868 SPRR2GQ9BYE4 73 aa5.28□□□□□ -1.56
GDF11-201ENST00000257868 SVEP1Q4LDE5 3571 aa5.25□□□□□ -1.57
GDF11-201ENST00000257868 LCE2BO14633 110 aa5.24□□□□□ -1.57
GDF11-201ENST00000257868 LCE3DQ9BYE3 92 aa5.24□□□□□ -1.57
GDF11-201ENST00000257868 KRTAP4-1Q9BYQ7 146 aa5.21□□□□□ -1.58
GDF11-201ENST00000257868 MT1FP04733 61 aa5.19□□□□□ -1.58
GDF11-201ENST00000257868 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
GDF11-201ENST00000257868 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
GDF11-201ENST00000257868 BSNQ9UPA5 3926 aa5.06□□□□□ -1.6
GDF11-201ENST00000257868 VPS13CQ709C8 3753 aa5.03□□□□□ -1.6
GDF11-201ENST00000257868 ALMS1Q8TCU4 4167 aa5.03□□□□□ -1.6
GDF11-201ENST00000257868 LCE2CQ5TA81 110 aa5.02□□□□□ -1.61
GDF11-201ENST00000257868 HUWE1Q7Z6Z7 4374 aaKnown RBP4.97□□□□□ -1.61
GDF11-201ENST00000257868 LCE2DQ5TA82 110 aaPredicted RBP4.94□□□□□ -1.62
GDF11-201ENST00000257868 DNAH2Q9P225 4427 aa4.92□□□□□ -1.62
GDF11-201ENST00000257868 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
GDF11-201ENST00000257868 LCE1BQ5T7P3 118 aa4.91□□□□□ -1.62
GDF11-201ENST00000257868 ANK3Q12955 4377 aaKnown RBP4.88□□□□□ -1.63
GDF11-201ENST00000257868 PRM1P04553 51 aa4.88□□□□□ -1.63
GDF11-201ENST00000257868 MT4P47944 62 aa4.84□□□□□ -1.63
GDF11-201ENST00000257868 AKAP9Q99996 3911 aa4.83□□□□□ -1.64
GDF11-201ENST00000257868 FAT1Q14517 4588 aa4.81□□□□□ -1.64
GDF11-201ENST00000257868 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
GDF11-201ENST00000257868 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
GDF11-201ENST00000257868 KRTAP4-8Q9BYQ9 185 aa4.81□□□□□ -1.64
GDF11-201ENST00000257868 DNAH1Q9P2D7 4330 aa4.77□□□□□ -1.65
GDF11-201ENST00000257868 MT1XP80297 61 aa4.74□□□□□ -1.65
GDF11-201ENST00000257868 MT3P25713 68 aa4.74□□□□□ -1.65
GDF11-201ENST00000257868 DNAH17Q9UFH2 4485 aa4.72□□□□□ -1.65
GDF11-201ENST00000257868 VPS13BQ7Z7G8 4022 aa4.67□□□□□ -1.66
GDF11-201ENST00000257868 KRTAP19-8Q3LI54 63 aa4.66□□□□□ -1.66
GDF11-201ENST00000257868 DNAH8Q96JB1 4490 aa4.66□□□□□ -1.66
GDF11-201ENST00000257868 DNAH10Q8IVF4 4471 aa4.65□□□□□ -1.66
GDF11-201ENST00000257868 KRTAP19-1Q8IUB9 90 aa4.64□□□□□ -1.67
GDF11-201ENST00000257868 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
GDF11-201ENST00000257868 LCE5AQ5TCM9 118 aa4.59□□□□□ -1.67
GDF11-201ENST00000257868 KRTAP19-3Q7Z4W3 81 aa4.59□□□□□ -1.67
GDF11-201ENST00000257868 DNAH5Q8TE73 4624 aa4.56□□□□□ -1.68
GDF11-201ENST00000257868 FAT3Q8TDW7 4589 aa4.53□□□□□ -1.68
GDF11-201ENST00000257868 DNAH11Q96DT5 4516 aa4.53□□□□□ -1.68
GDF11-201ENST00000257868 PLECQ15149 4684 aaKnown RBP4.52□□□□□ -1.69
GDF11-201ENST00000257868 MT1LQ93083 61 aa4.51□□□□□ -1.69
GDF11-201ENST00000257868 LRP1Q07954 4544 aaKnown RBP4.51□□□□□ -1.69
GDF11-201ENST00000257868 MT1BP07438 61 aa4.5□□□□□ -1.69
GDF11-201ENST00000257868 ANK2Q01484 3957 aa4.48□□□□□ -1.69
GDF11-201ENST00000257868 ZNF469Q96JG9 3925 aaPredicted RBP4.47□□□□□ -1.69
GDF11-201ENST00000257868 LYSTQ99698 3801 aa4.47□□□□□ -1.69
GDF11-201ENST00000257868 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
GDF11-201ENST00000257868 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
GDF11-201ENST00000257868 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
GDF11-201ENST00000257868 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
GDF11-201ENST00000257868 LOC100996750A0A140TA64 210 aa4.43□□□□□ -1.7
GDF11-201ENST00000257868 FAT2Q9NYQ8 4349 aa4.38□□□□□ -1.71
GDF11-201ENST00000257868 APOBP04114 4563 aaKnown RBP4.35□□□□□ -1.71
GDF11-201ENST00000257868 DNAH9Q9NYC9 4486 aa4.34□□□□□ -1.71
GDF11-201ENST00000257868 MT1EP04732 61 aa4.34□□□□□ -1.72
GDF11-201ENST00000257868 KMT2AQ03164 3969 aa4.33□□□□□ -1.72
GDF11-201ENST00000257868 KRTAP9-8Q9BYQ0 159 aa4.33□□□□□ -1.72
GDF11-201ENST00000257868 DNAH7Q8WXX0 4024 aa4.33□□□□□ -1.72
GDF11-201ENST00000257868 FRAS1Q86XX4 4008 aa4.31□□□□□ -1.72
GDF11-201ENST00000257868 DNAH6Q9C0G6 4158 aa4.3□□□□□ -1.72
GDF11-201ENST00000257868 MT1MQ8N339 61 aa4.3□□□□□ -1.72
GDF11-201ENST00000257868 SACSQ9NZJ4 4579 aa4.3□□□□□ -1.72
GDF11-201ENST00000257868 DNAH3Q8TD57 4116 aa4.29□□□□□ -1.72
GDF11-201ENST00000257868 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
GDF11-201ENST00000257868 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
GDF11-201ENST00000257868 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
GDF11-201ENST00000257868 KRTAP9-3Q9BYQ3 159 aa4.26□□□□□ -1.73
GDF11-201ENST00000257868 CMYA5Q8N3K9 4069 aa4.24□□□□□ -1.73
GDF11-201ENST00000257868 MYCBP2O75592 4640 aa4.24□□□□□ -1.73
GDF11-201ENST00000257868 LRP1BQ9NZR2 4599 aa4.16□□□□□ -1.74
GDF11-201ENST00000257868 VPS13DQ5THJ4 4388 aa4.15□□□□□ -1.74
GDF11-201ENST00000257868 KRTAP19-6Q3LI70 58 aa4.13□□□□□ -1.75
GDF11-201ENST00000257868 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
GDF11-201ENST00000257868 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
GDF11-201ENST00000257868 DYNC2H1Q8NCM8 4307 aaKnown RBP4.11□□□□□ -1.75
GDF11-201ENST00000257868 DYNC1H1Q14204 4646 aaKnown RBP4.08□□□□□ -1.76
GDF11-201ENST00000257868 KRTAP2-3P0C7H8 128 aa4.08□□□□□ -1.76
GDF11-201ENST00000257868 KRTAP2-4Q9BYR9 128 aa4.08□□□□□ -1.76
GDF11-201ENST00000257868 KRTAP2-1Q9BYU5 128 aa4.08□□□□□ -1.76
GDF11-201ENST00000257868 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
GDF11-201ENST00000257868 HECTD4Q9Y4D8 3996 aa4.06□□□□□ -1.76
GDF11-201ENST00000257868 RYR1P21817 5038 aa4.06□□□□□ -1.76
GDF11-201ENST00000257868 FLGP20930 4061 aaPredicted RBP4.05□□□□□ -1.76
GDF11-201ENST00000257868 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
GDF11-201ENST00000257868 PRKDCP78527 4128 aaKnown RBP4.03□□□□□ -1.76
GDF11-201ENST00000257868 MT1AP04731 61 aa4.02□□□□□ -1.77
GDF11-201ENST00000257868 PKD1P98161 4303 aa4□□□□□ -1.77
GDF11-201ENST00000257868 KRTAP9-2Q9BYQ4 174 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms