RNA–Protein interactions for RNA: ENST00000257818.2

LMO2-201, Transcript of LIM domain only 2, humanhuman

TSL 1 (best) BASIC

Gene LMO2, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-201ENST00000257818 KIAA1109Q2LD37 5005 aa13.11□□□□□ -0.31
LMO2-201ENST00000257818 KRTAP10-8P60410 259 aa13.08□□□□□ -0.32
LMO2-201ENST00000257818 EPPK1P58107 5090 aaKnown RBP13.06□□□□□ -0.32
LMO2-201ENST00000257818 FAT3Q8TDW7 4589 aa13.01□□□□□ -0.33
LMO2-201ENST00000257818 COX6B2Q6YFQ2 88 aa12.96□□□□□ -0.33
LMO2-201ENST00000257818 KRTAP25-1Q3LHN0 102 aa12.92□□□□□ -0.34
LMO2-201ENST00000257818 MYCBP2O75592 4640 aa12.92□□□□□ -0.34
LMO2-201ENST00000257818 DMBT1Q9UGM3 2413 aaPredicted RBP12.91□□□□□ -0.34
LMO2-201ENST00000257818 MT1HL1P0DM35 61 aa12.82□□□□□ -0.36
LMO2-201ENST00000257818 K7ERS5 55 aa12.73□□□□□ -0.37
LMO2-201ENST00000257818 KRTAP3-3Q9BYR6 98 aa12.72□□□□□ -0.37
LMO2-201ENST00000257818 KRTAP10-6P60371 365 aaPredicted RBP12.71□□□□□ -0.38
LMO2-201ENST00000257818 CRIPTQ9P021 101 aa12.7□□□□□ -0.38
LMO2-201ENST00000257818 KRTAP4-5Q9BYR2 181 aa12.69□□□□□ -0.38
LMO2-201ENST00000257818 KRTAP13-4Q3LI77 160 aa12.64□□□□□ -0.39
LMO2-201ENST00000257818 KRTAP3-2Q9BYR7 98 aa12.6□□□□□ -0.39
LMO2-201ENST00000257818 XP32Q5T750 250 aa12.59□□□□□ -0.39
LMO2-201ENST00000257818 ROMO1P60602 79 aa12.58□□□□□ -0.4
LMO2-201ENST00000257818 RPL37P61927 97 aaKnown RBP12.57□□□□□ -0.4
LMO2-201ENST00000257818 H3BS24 57 aa12.53□□□□□ -0.4
LMO2-201ENST00000257818 A0A0D9SG42 100 aa12.51□□□□□ -0.41
LMO2-201ENST00000257818 S4R3F8 94 aa12.49□□□□□ -0.41
LMO2-201ENST00000257818 ABCA13Q86UQ4 5058 aa12.44□□□□□ -0.42
LMO2-201ENST00000257818 P0C880 135 aa12.41□□□□□ -0.42
LMO2-201ENST00000257818 TPRXLQ17RH7 258 aa12.34□□□□□ -0.43
LMO2-201ENST00000257818 LPAP08519 4548 aa12.34□□□□□ -0.43
LMO2-201ENST00000257818 LRP2P98164 4655 aa12.32□□□□□ -0.44
LMO2-201ENST00000257818 HERC2O95714 4834 aa12.26□□□□□ -0.45
LMO2-201ENST00000257818 KRTAP12-2P59991 146 aa12.23□□□□□ -0.45
LMO2-201ENST00000257818 BIRC6Q9NR09 4857 aa12.23□□□□□ -0.45
LMO2-201ENST00000257818 J3QL48 77 aa12.22□□□□□ -0.45
LMO2-201ENST00000257818 C10orf95Q9H7T3 257 aa12.21□□□□□ -0.45
LMO2-201ENST00000257818 KRTAP12-1P59990 96 aa12.11□□□□□ -0.47
LMO2-201ENST00000257818 SPINT4Q6UDR6 99 aa12.07□□□□□ -0.48
LMO2-201ENST00000257818 M0QZ58 72 aa11.93□□□□□ -0.5
LMO2-201ENST00000257818 SEC61BP60468 96 aaKnown RBP11.89□□□□□ -0.51
LMO2-201ENST00000257818 KRTAP15-1Q3LI76 137 aa11.88□□□□□ -0.51
LMO2-201ENST00000257818 MUC17Q685J3 4493 aa11.81□□□□□ -0.52
LMO2-201ENST00000257818 PCLOQ9Y6V0 5065 aa11.8□□□□□ -0.52
LMO2-201ENST00000257818 KRTAP4-1Q9BYQ7 146 aa11.78□□□□□ -0.52
LMO2-201ENST00000257818 HERC1Q15751 4861 aa11.7□□□□□ -0.54
LMO2-201ENST00000257818 NDUFAF8A1L188 74 aa11.65□□□□□ -0.54
LMO2-201ENST00000257818 R4GN34 69 aa11.59□□□□□ -0.55
LMO2-201ENST00000257818 MUC2Q02817 5179 aa11.54□□□□□ -0.56
LMO2-201ENST00000257818 HMCN2Q8NDA2 5059 aa11.54□□□□□ -0.56
LMO2-201ENST00000257818 LORP23490 312 aaPredicted RBP11.51□□□□□ -0.57
LMO2-201ENST00000257818 KRTAP19-2Q3LHN2 52 aa11.47□□□□□ -0.57
LMO2-201ENST00000257818 FLGP20930 4061 aaPredicted RBP11.21□□□□□ -0.61
LMO2-201ENST00000257818 PLAC4Q8WY50 150 aa11.2□□□□□ -0.62
LMO2-201ENST00000257818 UBR4Q5T4S7 5183 aa11.07□□□□□ -0.64
LMO2-201ENST00000257818 LCE2CQ5TA81 110 aa11.03□□□□□ -0.64
LMO2-201ENST00000257818 CAMK2N1Q7Z7J9 78 aa11.02□□□□□ -0.64
LMO2-201ENST00000257818 RNF213Q63HN8 5207 aa11.01□□□□□ -0.65
LMO2-201ENST00000257818 FAT4Q6V0I7 4981 aa11□□□□□ -0.65
LMO2-201ENST00000257818 PP632Q6XCG6 107 aa10.98□□□□□ -0.65
LMO2-201ENST00000257818 MT1HP80294 61 aa10.77□□□□□ -0.69
LMO2-201ENST00000257818 M0R2T5 61 aa10.75□□□□□ -0.69
LMO2-201ENST00000257818 LUZP6Q538Z0 58 aa10.68□□□□□ -0.7
LMO2-201ENST00000257818 TNP1P09430 55 aa10.65□□□□□ -0.7
LMO2-201ENST00000257818 KRTAP23-1A1A580 65 aa10.56□□□□□ -0.72
LMO2-201ENST00000257818 MT2AP02795 61 aa10.45□□□□□ -0.74
LMO2-201ENST00000257818 KRTAP9-8Q9BYQ0 159 aa10.44□□□□□ -0.74
LMO2-201ENST00000257818 MT1FP04733 61 aa10.44□□□□□ -0.74
LMO2-201ENST00000257818 SPRR5A0A1B0GTR4 108 aa10.43□□□□□ -0.74
LMO2-201ENST00000257818 KRTAP10-10P60014 251 aa10.41□□□□□ -0.74
LMO2-201ENST00000257818 KRTAP19-1Q8IUB9 90 aa10.4□□□□□ -0.74
LMO2-201ENST00000257818 SPRR2GQ9BYE4 73 aa10.4□□□□□ -0.74
LMO2-201ENST00000257818 A0A0A0MQY5 61 aa10.3□□□□□ -0.76
LMO2-201ENST00000257818 LCE3AQ5TA76 89 aa10.13□□□□□ -0.79
LMO2-201ENST00000257818 KRTAP19-8Q3LI54 63 aa10.03□□□□□ -0.8
LMO2-201ENST00000257818 KRTAP9-3Q9BYQ3 159 aa10.03□□□□□ -0.8
LMO2-201ENST00000257818 LCE2AQ5TA79 106 aaPredicted RBP9.97□□□□□ -0.81
LMO2-201ENST00000257818 MT1BP07438 61 aa9.95□□□□□ -0.82
LMO2-201ENST00000257818 KRTAP8-1Q8IUC2 63 aa9.85□□□□□ -0.83
LMO2-201ENST00000257818 KRTAP10-5P60370 271 aa9.77□□□□□ -0.84
LMO2-201ENST00000257818 MT1XP80297 61 aa9.75□□□□□ -0.85
LMO2-201ENST00000257818 LCE2BO14633 110 aa9.73□□□□□ -0.85
LMO2-201ENST00000257818 KRTAP12-3P60328 96 aa9.6□□□□□ -0.87
LMO2-201ENST00000257818 KRTAP10-12P60413 245 aa9.6□□□□□ -0.87
LMO2-201ENST00000257818 USH2AO75445 5202 aa9.56□□□□□ -0.88
LMO2-201ENST00000257818 KRTAP10-7P60409 375 aaPredicted RBP9.51□□□□□ -0.89
LMO2-201ENST00000257818 PRO2289Q9P1D8 64 aa9.46□□□□□ -0.9
LMO2-201ENST00000257818 INE1O15225 51 aa9.31□□□□□ -0.92
LMO2-201ENST00000257818 KRTAP19-5Q3LI72 72 aa9.15□□□□□ -0.95
LMO2-201ENST00000257818 KMT2DO14686 5537 aa9.1□□□□□ -0.95
LMO2-201ENST00000257818 LCE3CQ5T5A8 94 aa9.07□□□□□ -0.96
LMO2-201ENST00000257818 SSPOA2VEC9 5147 aa9.06□□□□□ -0.96
LMO2-201ENST00000257818 KRTAP4-8A0A0G2JLE6 195 aa9□□□□□ -0.97
LMO2-201ENST00000257818 KRTAP4-8Q9BYQ9 185 aa9□□□□□ -0.97
LMO2-201ENST00000257818 FSIP2Q5CZC0 6907 aa8.96□□□□□ -0.97
LMO2-201ENST00000257818 KRTAP19-6Q3LI70 58 aa8.91□□□□□ -0.98
LMO2-201ENST00000257818 KRTAP9-6A8MVA2 160 aa8.84□□□□□ -0.99
LMO2-201ENST00000257818 LCE2DQ5TA82 110 aaPredicted RBP8.8□□□□□ -1
LMO2-201ENST00000257818 KRTAP19-7Q3SYF9 63 aa8.69□□□□□ -1.02
LMO2-201ENST00000257818 KRTAP4-7Q9BYR0 210 aa8.63□□□□□ -1.03
LMO2-201ENST00000257818 FCGBPQ9Y6R7 5405 aaPredicted RBP8.58□□□□□ -1.04
LMO2-201ENST00000257818 KRTAP2-3P0C7H8 128 aa8.57□□□□□ -1.04
LMO2-201ENST00000257818 KRTAP2-4Q9BYR9 128 aa8.57□□□□□ -1.04
LMO2-201ENST00000257818 KRTAP2-1Q9BYU5 128 aa8.57□□□□□ -1.04
LMO2-201ENST00000257818 MT1EP04732 61 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms