RNA–Protein interactions for RNA: ENST00000257566.7

TBX3-201, Transcript of T-box 3, humanhuman

TSL 1 (best) BASIC

Gene TBX3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBX3-201ENST00000257566 DNAH2Q9P225 4427 aa6.38□□□□□ -1.39
TBX3-201ENST00000257566 LRP1BQ9NZR2 4599 aa6.37□□□□□ -1.39
TBX3-201ENST00000257566 KRTAP13-4Q3LI77 160 aa6.37□□□□□ -1.39
TBX3-201ENST00000257566 DNAH6Q9C0G6 4158 aa6.35□□□□□ -1.39
TBX3-201ENST00000257566 TNP1P09430 55 aa6.35□□□□□ -1.39
TBX3-201ENST00000257566 DNAH5Q8TE73 4624 aa6.34□□□□□ -1.39
TBX3-201ENST00000257566 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
TBX3-201ENST00000257566 KRTAP3-1Q9BYR8 98 aa6.32□□□□□ -1.4
TBX3-201ENST00000257566 HECTD4Q9Y4D8 3996 aa6.31□□□□□ -1.4
TBX3-201ENST00000257566 FAT1Q14517 4588 aa6.3□□□□□ -1.4
TBX3-201ENST00000257566 A0A1B0GVY2 172 aa6.3□□□□□ -1.4
TBX3-201ENST00000257566 DYNC2H1Q8NCM8 4307 aaKnown RBP6.29□□□□□ -1.4
TBX3-201ENST00000257566 XP32Q5T750 250 aa6.25□□□□□ -1.41
TBX3-201ENST00000257566 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
TBX3-201ENST00000257566 PRO2289Q9P1D8 64 aa6.23□□□□□ -1.41
TBX3-201ENST00000257566 HYDINQ4G0P3 5121 aa6.22□□□□□ -1.41
TBX3-201ENST00000257566 VPS13BQ7Z7G8 4022 aa6.21□□□□□ -1.42
TBX3-201ENST00000257566 MYCBP2O75592 4640 aa6.19□□□□□ -1.42
TBX3-201ENST00000257566 DYNC1H1Q14204 4646 aaKnown RBP6.19□□□□□ -1.42
TBX3-201ENST00000257566 PKHD1P08F94 4074 aa6.15□□□□□ -1.42
TBX3-201ENST00000257566 ALMS1Q8TCU4 4167 aa6.14□□□□□ -1.43
TBX3-201ENST00000257566 KRTAP10-4P60372 401 aaPredicted RBP6.11□□□□□ -1.43
TBX3-201ENST00000257566 FAT3Q8TDW7 4589 aa6.06□□□□□ -1.44
TBX3-201ENST00000257566 SACSQ9NZJ4 4579 aa6.06□□□□□ -1.44
TBX3-201ENST00000257566 INE1O15225 51 aa6.05□□□□□ -1.44
TBX3-201ENST00000257566 FAT2Q9NYQ8 4349 aa6.02□□□□□ -1.45
TBX3-201ENST00000257566 KRTAP3-2Q9BYR7 98 aa6.01□□□□□ -1.45
TBX3-201ENST00000257566 LRP1Q07954 4544 aaKnown RBP5.99□□□□□ -1.45
TBX3-201ENST00000257566 APOBP04114 4563 aaKnown RBP5.99□□□□□ -1.45
TBX3-201ENST00000257566 KIAA1109Q2LD37 5005 aa5.98□□□□□ -1.45
TBX3-201ENST00000257566 KMT2CQ8NEZ4 4911 aaKnown RBP5.96□□□□□ -1.46
TBX3-201ENST00000257566 PKD1P98161 4303 aa5.95□□□□□ -1.46
TBX3-201ENST00000257566 RYR1P21817 5038 aa5.92□□□□□ -1.46
TBX3-201ENST00000257566 MT1HL1P0DM35 61 aa5.89□□□□□ -1.47
TBX3-201ENST00000257566 KRTAP3-3Q9BYR6 98 aa5.88□□□□□ -1.47
TBX3-201ENST00000257566 RYR3Q15413 4870 aa5.88□□□□□ -1.47
TBX3-201ENST00000257566 RYR2Q92736 4967 aa5.86□□□□□ -1.47
TBX3-201ENST00000257566 KRTAP4-5Q9BYR2 181 aa5.85□□□□□ -1.47
TBX3-201ENST00000257566 KRTAP17-1Q9BYP8 105 aa5.78□□□□□ -1.48
TBX3-201ENST00000257566 KRTAP10-10P60014 251 aa5.7□□□□□ -1.5
TBX3-201ENST00000257566 HSPG2P98160 4391 aa5.69□□□□□ -1.5
TBX3-201ENST00000257566 LRP2P98164 4655 aa5.68□□□□□ -1.5
TBX3-201ENST00000257566 PKHD1L1Q86WI1 4243 aa5.6□□□□□ -1.51
TBX3-201ENST00000257566 EPPK1P58107 5090 aaKnown RBP5.59□□□□□ -1.52
TBX3-201ENST00000257566 LPAP08519 4548 aa5.53□□□□□ -1.52
TBX3-201ENST00000257566 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
TBX3-201ENST00000257566 TNXBP22105 4242 aa5.52□□□□□ -1.53
TBX3-201ENST00000257566 HERC2O95714 4834 aa5.49□□□□□ -1.53
TBX3-201ENST00000257566 LORP23490 312 aaPredicted RBP5.47□□□□□ -1.53
TBX3-201ENST00000257566 KRTAP4-1Q9BYQ7 146 aa5.47□□□□□ -1.53
TBX3-201ENST00000257566 MUC2Q02817 5179 aa5.46□□□□□ -1.54
TBX3-201ENST00000257566 ABCA13Q86UQ4 5058 aa5.39□□□□□ -1.55
TBX3-201ENST00000257566 PCLOQ9Y6V0 5065 aa5.36□□□□□ -1.55
TBX3-201ENST00000257566 RNF213Q63HN8 5207 aa5.32□□□□□ -1.56
TBX3-201ENST00000257566 LCE3AQ5TA76 89 aa5.28□□□□□ -1.56
TBX3-201ENST00000257566 FAT4Q6V0I7 4981 aa5.23□□□□□ -1.57
TBX3-201ENST00000257566 HERC1Q15751 4861 aa5.2□□□□□ -1.58
TBX3-201ENST00000257566 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
TBX3-201ENST00000257566 FSIP2Q5CZC0 6907 aa5.2□□□□□ -1.58
TBX3-201ENST00000257566 BIRC6Q9NR09 4857 aa5.17□□□□□ -1.58
TBX3-201ENST00000257566 KRTAP10-12P60413 245 aa5.09□□□□□ -1.59
TBX3-201ENST00000257566 UBR4Q5T4S7 5183 aa5.08□□□□□ -1.6
TBX3-201ENST00000257566 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
TBX3-201ENST00000257566 KRTAP19-2Q3LHN2 52 aa4.99□□□□□ -1.61
TBX3-201ENST00000257566 MT1HP80294 61 aa4.98□□□□□ -1.61
TBX3-201ENST00000257566 MUC17Q685J3 4493 aa4.97□□□□□ -1.61
TBX3-201ENST00000257566 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.61
TBX3-201ENST00000257566 FLGP20930 4061 aaPredicted RBP4.94□□□□□ -1.62
TBX3-201ENST00000257566 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
TBX3-201ENST00000257566 MT2AP02795 61 aa4.9□□□□□ -1.62
TBX3-201ENST00000257566 MT1FP04733 61 aa4.9□□□□□ -1.62
TBX3-201ENST00000257566 KRTAP10-5P60370 271 aa4.9□□□□□ -1.62
TBX3-201ENST00000257566 HMCN2Q8NDA2 5059 aa4.9□□□□□ -1.62
TBX3-201ENST00000257566 LCE2CQ5TA81 110 aa4.89□□□□□ -1.63
TBX3-201ENST00000257566 SPRR2GQ9BYE4 73 aa4.85□□□□□ -1.63
TBX3-201ENST00000257566 KRTAP19-1Q8IUB9 90 aa4.85□□□□□ -1.63
TBX3-201ENST00000257566 KRTAP8-1Q8IUC2 63 aa4.79□□□□□ -1.64
TBX3-201ENST00000257566 USH2AO75445 5202 aa4.78□□□□□ -1.64
TBX3-201ENST00000257566 KRTAP9-8Q9BYQ0 159 aa4.73□□□□□ -1.65
TBX3-201ENST00000257566 LCE3CQ5T5A8 94 aa4.64□□□□□ -1.67
TBX3-201ENST00000257566 SYNE1Q8NF91 8797 aaKnown RBP4.62□□□□□ -1.67
TBX3-201ENST00000257566 MT1BP07438 61 aa4.61□□□□□ -1.67
TBX3-201ENST00000257566 KRTAP12-4P60329 112 aa4.61□□□□□ -1.67
TBX3-201ENST00000257566 KMT2DO14686 5537 aa4.61□□□□□ -1.67
TBX3-201ENST00000257566 KRTAP19-8Q3LI54 63 aa4.59□□□□□ -1.67
TBX3-201ENST00000257566 DSTQ03001 7570 aaKnown RBP4.59□□□□□ -1.67
TBX3-201ENST00000257566 MT1XP80297 61 aa4.57□□□□□ -1.68
TBX3-201ENST00000257566 KRTAP10-7P60409 375 aaPredicted RBP4.56□□□□□ -1.68
TBX3-201ENST00000257566 KRTAP9-3Q9BYQ3 159 aa4.53□□□□□ -1.68
TBX3-201ENST00000257566 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
TBX3-201ENST00000257566 KRTAP4-8A0A0G2JLE6 195 aa4.49□□□□□ -1.69
TBX3-201ENST00000257566 KRTAP4-8Q9BYQ9 185 aa4.49□□□□□ -1.69
TBX3-201ENST00000257566 FCGBPQ9Y6R7 5405 aaPredicted RBP4.45□□□□□ -1.7
TBX3-201ENST00000257566 LCE2BO14633 110 aa4.43□□□□□ -1.7
TBX3-201ENST00000257566 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
TBX3-201ENST00000257566 LCE2AQ5TA79 106 aaPredicted RBP4.25□□□□□ -1.73
TBX3-201ENST00000257566 SYNE2Q8WXH0 6885 aaKnown RBP4.19□□□□□ -1.74
TBX3-201ENST00000257566 LCE3BQ5TA77 95 aa4.18□□□□□ -1.74
TBX3-201ENST00000257566 MUC12Q9UKN1 5478 aa4.17□□□□□ -1.74
TBX3-201ENST00000257566 SPRR2FQ96RM1 72 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms