RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 PKD1P98161 4303 aa8.19□□□□□ -1.1
SLC6A8-201ENST00000253122 KRTAP10-4P60372 401 aaPredicted RBP8.17□□□□□ -1.1
SLC6A8-201ENST00000253122 KRTAP13-4Q3LI77 160 aa8.16□□□□□ -1.1
SLC6A8-201ENST00000253122 RYR2Q92736 4967 aa8.16□□□□□ -1.1
SLC6A8-201ENST00000253122 M0QZ58 72 aa8.12□□□□□ -1.11
SLC6A8-201ENST00000253122 R4GN34 69 aa8.12□□□□□ -1.11
SLC6A8-201ENST00000253122 PKHD1P08F94 4074 aa8.1□□□□□ -1.11
SLC6A8-201ENST00000253122 KRTAP10-6P60371 365 aaPredicted RBP8.1□□□□□ -1.11
SLC6A8-201ENST00000253122 KMT2CQ8NEZ4 4911 aaKnown RBP8.09□□□□□ -1.11
SLC6A8-201ENST00000253122 KRTAP12-2P59991 146 aa8.06□□□□□ -1.12
SLC6A8-201ENST00000253122 CAMK2N1Q7Z7J9 78 aa8.06□□□□□ -1.12
SLC6A8-201ENST00000253122 VPS13BQ7Z7G8 4022 aa8.06□□□□□ -1.12
SLC6A8-201ENST00000253122 LUZP6Q538Z0 58 aa8.04□□□□□ -1.12
SLC6A8-201ENST00000253122 FAT1Q14517 4588 aa8.02□□□□□ -1.13
SLC6A8-201ENST00000253122 XP32Q5T750 250 aa8.02□□□□□ -1.13
SLC6A8-201ENST00000253122 KRTAP10-8P60410 259 aa8.01□□□□□ -1.13
SLC6A8-201ENST00000253122 APOBP04114 4563 aaKnown RBP7.98□□□□□ -1.13
SLC6A8-201ENST00000253122 KRTAP3-3Q9BYR6 98 aa7.95□□□□□ -1.14
SLC6A8-201ENST00000253122 KRTAP3-2Q9BYR7 98 aa7.94□□□□□ -1.14
SLC6A8-201ENST00000253122 KRTAP12-1P59990 96 aa7.92□□□□□ -1.14
SLC6A8-201ENST00000253122 J3QL48 77 aa7.88□□□□□ -1.15
SLC6A8-201ENST00000253122 RYR3Q15413 4870 aa7.84□□□□□ -1.15
SLC6A8-201ENST00000253122 KRTAP15-1Q3LI76 137 aa7.83□□□□□ -1.16
SLC6A8-201ENST00000253122 PLAC4Q8WY50 150 aa7.82□□□□□ -1.16
SLC6A8-201ENST00000253122 MYCBP2O75592 4640 aa7.81□□□□□ -1.16
SLC6A8-201ENST00000253122 KIAA1109Q2LD37 5005 aa7.81□□□□□ -1.16
SLC6A8-201ENST00000253122 RYR1P21817 5038 aa7.8□□□□□ -1.16
SLC6A8-201ENST00000253122 MT1HL1P0DM35 61 aa7.8□□□□□ -1.16
SLC6A8-201ENST00000253122 KRTAP17-1Q9BYP8 105 aa7.8□□□□□ -1.16
SLC6A8-201ENST00000253122 A0A0A0MQY5 61 aa7.78□□□□□ -1.16
SLC6A8-201ENST00000253122 HSPG2P98160 4391 aa7.75□□□□□ -1.17
SLC6A8-201ENST00000253122 KRTAP4-5Q9BYR2 181 aa7.73□□□□□ -1.17
SLC6A8-201ENST00000253122 LRP1Q07954 4544 aaKnown RBP7.68□□□□□ -1.18
SLC6A8-201ENST00000253122 SEC61BP60468 96 aaKnown RBP7.64□□□□□ -1.19
SLC6A8-201ENST00000253122 EPPK1P58107 5090 aaKnown RBP7.62□□□□□ -1.19
SLC6A8-201ENST00000253122 PKHD1L1Q86WI1 4243 aa7.58□□□□□ -1.2
SLC6A8-201ENST00000253122 FAT3Q8TDW7 4589 aa7.52□□□□□ -1.21
SLC6A8-201ENST00000253122 M0R2T5 61 aa7.51□□□□□ -1.21
SLC6A8-201ENST00000253122 TNXBP22105 4242 aa7.48□□□□□ -1.21
SLC6A8-201ENST00000253122 PP632Q6XCG6 107 aa7.46□□□□□ -1.22
SLC6A8-201ENST00000253122 TNP1P09430 55 aa7.41□□□□□ -1.22
SLC6A8-201ENST00000253122 BIRC6Q9NR09 4857 aa7.39□□□□□ -1.23
SLC6A8-201ENST00000253122 LORP23490 312 aaPredicted RBP7.34□□□□□ -1.23
SLC6A8-201ENST00000253122 HERC2O95714 4834 aa7.33□□□□□ -1.24
SLC6A8-201ENST00000253122 ABCA13Q86UQ4 5058 aa7.28□□□□□ -1.24
SLC6A8-201ENST00000253122 LRP2P98164 4655 aa7.18□□□□□ -1.26
SLC6A8-201ENST00000253122 LPAP08519 4548 aa7.08□□□□□ -1.28
SLC6A8-201ENST00000253122 KRTAP4-1Q9BYQ7 146 aa7.06□□□□□ -1.28
SLC6A8-201ENST00000253122 PCLOQ9Y6V0 5065 aa6.93□□□□□ -1.3
SLC6A8-201ENST00000253122 HERC1Q15751 4861 aa6.85□□□□□ -1.31
SLC6A8-201ENST00000253122 KRTAP10-10P60014 251 aa6.84□□□□□ -1.31
SLC6A8-201ENST00000253122 HMCN2Q8NDA2 5059 aa6.76□□□□□ -1.33
SLC6A8-201ENST00000253122 KRTAP19-2Q3LHN2 52 aa6.74□□□□□ -1.33
SLC6A8-201ENST00000253122 MUC2Q02817 5179 aa6.72□□□□□ -1.33
SLC6A8-201ENST00000253122 MUC17Q685J3 4493 aa6.71□□□□□ -1.34
SLC6A8-201ENST00000253122 LCE3AQ5TA76 89 aa6.68□□□□□ -1.34
SLC6A8-201ENST00000253122 KRTAP23-1A1A580 65 aa6.66□□□□□ -1.34
SLC6A8-201ENST00000253122 RNF213Q63HN8 5207 aa6.63□□□□□ -1.35
SLC6A8-201ENST00000253122 LCE2CQ5TA81 110 aa6.59□□□□□ -1.35
SLC6A8-201ENST00000253122 PRO2289Q9P1D8 64 aa6.58□□□□□ -1.36
SLC6A8-201ENST00000253122 MT1HP80294 61 aa6.57□□□□□ -1.36
SLC6A8-201ENST00000253122 FLGP20930 4061 aaPredicted RBP6.53□□□□□ -1.36
SLC6A8-201ENST00000253122 UBR4Q5T4S7 5183 aa6.49□□□□□ -1.37
SLC6A8-201ENST00000253122 INE1O15225 51 aa6.47□□□□□ -1.37
SLC6A8-201ENST00000253122 SPRR5A0A1B0GTR4 108 aa6.45□□□□□ -1.38
SLC6A8-201ENST00000253122 FAT4Q6V0I7 4981 aa6.45□□□□□ -1.38
SLC6A8-201ENST00000253122 KRTAP12-3P60328 96 aa6.43□□□□□ -1.38
SLC6A8-201ENST00000253122 KRTAP10-12P60413 245 aa6.4□□□□□ -1.39
SLC6A8-201ENST00000253122 FSIP2Q5CZC0 6907 aa6.39□□□□□ -1.39
SLC6A8-201ENST00000253122 MT2AP02795 61 aa6.37□□□□□ -1.39
SLC6A8-201ENST00000253122 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
SLC6A8-201ENST00000253122 MT1FP04733 61 aa6.33□□□□□ -1.4
SLC6A8-201ENST00000253122 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
SLC6A8-201ENST00000253122 KRTAP9-8Q9BYQ0 159 aa6.28□□□□□ -1.4
SLC6A8-201ENST00000253122 KRTAP8-1Q8IUC2 63 aa6.23□□□□□ -1.41
SLC6A8-201ENST00000253122 OBSCNQ5VST9 7968 aa6.21□□□□□ -1.42
SLC6A8-201ENST00000253122 CRCT1Q9UGL9 99 aa6.13□□□□□ -1.43
SLC6A8-201ENST00000253122 LCE2DQ5TA82 110 aaPredicted RBP6.11□□□□□ -1.43
SLC6A8-201ENST00000253122 KRTAP19-8Q3LI54 63 aa6.07□□□□□ -1.44
SLC6A8-201ENST00000253122 LCE2AQ5TA79 106 aaPredicted RBP6.07□□□□□ -1.44
SLC6A8-201ENST00000253122 KRTAP9-3Q9BYQ3 159 aa6.05□□□□□ -1.44
SLC6A8-201ENST00000253122 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
SLC6A8-201ENST00000253122 MT1XP80297 61 aa6.01□□□□□ -1.45
SLC6A8-201ENST00000253122 KRTAP10-5P60370 271 aa6□□□□□ -1.45
SLC6A8-201ENST00000253122 MT1BP07438 61 aa5.99□□□□□ -1.45
SLC6A8-201ENST00000253122 SYNE1Q8NF91 8797 aaKnown RBP5.97□□□□□ -1.45
SLC6A8-201ENST00000253122 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
SLC6A8-201ENST00000253122 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
SLC6A8-201ENST00000253122 LCE2BO14633 110 aa5.87□□□□□ -1.47
SLC6A8-201ENST00000253122 USH2AO75445 5202 aa5.86□□□□□ -1.47
SLC6A8-201ENST00000253122 KMT2DO14686 5537 aa5.79□□□□□ -1.48
SLC6A8-201ENST00000253122 KRTAP4-8A0A0G2JLE6 195 aa5.73□□□□□ -1.49
SLC6A8-201ENST00000253122 KRTAP4-8Q9BYQ9 185 aa5.73□□□□□ -1.49
SLC6A8-201ENST00000253122 DSTQ03001 7570 aaKnown RBP5.7□□□□□ -1.5
SLC6A8-201ENST00000253122 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
SLC6A8-201ENST00000253122 FCGBPQ9Y6R7 5405 aaPredicted RBP5.63□□□□□ -1.51
SLC6A8-201ENST00000253122 KRTAP19-6Q3LI70 58 aa5.46□□□□□ -1.53
SLC6A8-201ENST00000253122 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
SLC6A8-201ENST00000253122 KRTAP9-2Q9BYQ4 174 aa5.33□□□□□ -1.56
SLC6A8-201ENST00000253122 KRTAP12-4P60329 112 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms