RNA–Protein interactions for RNA: ENST00000252136.11

TRMT2A-201, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRMT2A, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-201ENST00000252136 KRTAP3-3Q9BYR6 98 aa10.05□□□□□ -0.8
TRMT2A-201ENST00000252136 DYNC1H1Q14204 4646 aaKnown RBP10.01□□□□□ -0.81
TRMT2A-201ENST00000252136 KRTAP3-2Q9BYR7 98 aa9.99□□□□□ -0.81
TRMT2A-201ENST00000252136 PKHD1L1Q86WI1 4243 aa9.99□□□□□ -0.81
TRMT2A-201ENST00000252136 S4R3F8 94 aa9.95□□□□□ -0.82
TRMT2A-201ENST00000252136 KRTAP10-8P60410 259 aa9.92□□□□□ -0.82
TRMT2A-201ENST00000252136 APOBP04114 4563 aaKnown RBP9.9□□□□□ -0.82
TRMT2A-201ENST00000252136 KRTAP10-4P60372 401 aaPredicted RBP9.9□□□□□ -0.82
TRMT2A-201ENST00000252136 NDUFAF8A1L188 74 aa9.89□□□□□ -0.83
TRMT2A-201ENST00000252136 KRTAP12-2P59991 146 aa9.88□□□□□ -0.83
TRMT2A-201ENST00000252136 HSPG2P98160 4391 aa9.86□□□□□ -0.83
TRMT2A-201ENST00000252136 MYCBP2O75592 4640 aa9.84□□□□□ -0.83
TRMT2A-201ENST00000252136 LRP1Q07954 4544 aaKnown RBP9.8□□□□□ -0.84
TRMT2A-201ENST00000252136 KRTAP15-1Q3LI76 137 aa9.78□□□□□ -0.84
TRMT2A-201ENST00000252136 FAT3Q8TDW7 4589 aa9.77□□□□□ -0.85
TRMT2A-201ENST00000252136 XP32Q5T750 250 aa9.72□□□□□ -0.85
TRMT2A-201ENST00000252136 KRTAP12-1P59990 96 aa9.72□□□□□ -0.85
TRMT2A-201ENST00000252136 A0A1B0GVY2 172 aa9.68□□□□□ -0.86
TRMT2A-201ENST00000252136 TNXBP22105 4242 aa9.6□□□□□ -0.87
TRMT2A-201ENST00000252136 LPAP08519 4548 aa9.52□□□□□ -0.89
TRMT2A-201ENST00000252136 M0QZ58 72 aa9.49□□□□□ -0.89
TRMT2A-201ENST00000252136 Q5VSD8 79 aa9.45□□□□□ -0.9
TRMT2A-201ENST00000252136 KMT2CQ8NEZ4 4911 aaKnown RBP9.43□□□□□ -0.9
TRMT2A-201ENST00000252136 LRP2P98164 4655 aa9.38□□□□□ -0.91
TRMT2A-201ENST00000252136 R4GN34 69 aa9.33□□□□□ -0.92
TRMT2A-201ENST00000252136 RYR2Q92736 4967 aa9.32□□□□□ -0.92
TRMT2A-201ENST00000252136 PLAC4Q8WY50 150 aa9.24□□□□□ -0.93
TRMT2A-201ENST00000252136 KRTAP17-1Q9BYP8 105 aa9.18□□□□□ -0.94
TRMT2A-201ENST00000252136 MT1HL1P0DM35 61 aa9.18□□□□□ -0.94
TRMT2A-201ENST00000252136 LORP23490 312 aaPredicted RBP9.14□□□□□ -0.95
TRMT2A-201ENST00000252136 A0A0A0MQY5 61 aa9.09□□□□□ -0.95
TRMT2A-201ENST00000252136 RYR1P21817 5038 aa9.08□□□□□ -0.96
TRMT2A-201ENST00000252136 KIAA1109Q2LD37 5005 aa9.08□□□□□ -0.96
TRMT2A-201ENST00000252136 RYR3Q15413 4870 aa9□□□□□ -0.97
TRMT2A-201ENST00000252136 LUZP6Q538Z0 58 aa8.98□□□□□ -0.97
TRMT2A-201ENST00000252136 CAMK2N1Q7Z7J9 78 aa8.96□□□□□ -0.97
TRMT2A-201ENST00000252136 ABCA13Q86UQ4 5058 aa8.94□□□□□ -0.98
TRMT2A-201ENST00000252136 PP632Q6XCG6 107 aa8.82□□□□□ -1
TRMT2A-201ENST00000252136 KRTAP21-3Q3LHN1 58 aa8.81□□□□□ -1
TRMT2A-201ENST00000252136 SEC61BP60468 96 aaKnown RBP8.78□□□□□ -1
TRMT2A-201ENST00000252136 MUC17Q685J3 4493 aa8.76□□□□□ -1.01
TRMT2A-201ENST00000252136 KRTAP4-1Q9BYQ7 146 aa8.76□□□□□ -1.01
TRMT2A-201ENST00000252136 KRTAP4-5Q9BYR2 181 aa8.62□□□□□ -1.03
TRMT2A-201ENST00000252136 MUC2Q02817 5179 aa8.58□□□□□ -1.04
TRMT2A-201ENST00000252136 EPPK1P58107 5090 aaKnown RBP8.58□□□□□ -1.04
TRMT2A-201ENST00000252136 TNP1P09430 55 aa8.57□□□□□ -1.04
TRMT2A-201ENST00000252136 KRTAP19-2Q3LHN2 52 aa8.5□□□□□ -1.05
TRMT2A-201ENST00000252136 J3QL48 77 aa8.42□□□□□ -1.06
TRMT2A-201ENST00000252136 SPRR5A0A1B0GTR4 108 aa8.34□□□□□ -1.08
TRMT2A-201ENST00000252136 FLGP20930 4061 aaPredicted RBP8.33□□□□□ -1.08
TRMT2A-201ENST00000252136 KRTAP23-1A1A580 65 aa8.29□□□□□ -1.08
TRMT2A-201ENST00000252136 PCLOQ9Y6V0 5065 aa8.24□□□□□ -1.09
TRMT2A-201ENST00000252136 HERC2O95714 4834 aa8.19□□□□□ -1.1
TRMT2A-201ENST00000252136 FAT4Q6V0I7 4981 aa8.11□□□□□ -1.11
TRMT2A-201ENST00000252136 LCE3AQ5TA76 89 aa8.1□□□□□ -1.11
TRMT2A-201ENST00000252136 HERC1Q15751 4861 aa8.08□□□□□ -1.12
TRMT2A-201ENST00000252136 BIRC6Q9NR09 4857 aa8□□□□□ -1.13
TRMT2A-201ENST00000252136 KRTAP19-1Q8IUB9 90 aa7.99□□□□□ -1.13
TRMT2A-201ENST00000252136 SPRR2GQ9BYE4 73 aa7.98□□□□□ -1.13
TRMT2A-201ENST00000252136 M0R2T5 61 aa7.97□□□□□ -1.13
TRMT2A-201ENST00000252136 PRO2289Q9P1D8 64 aa7.88□□□□□ -1.15
TRMT2A-201ENST00000252136 LCE2CQ5TA81 110 aa7.86□□□□□ -1.15
TRMT2A-201ENST00000252136 KRTAP10-10P60014 251 aa7.8□□□□□ -1.16
TRMT2A-201ENST00000252136 KRTAP8-1Q8IUC2 63 aa7.75□□□□□ -1.17
TRMT2A-201ENST00000252136 HMCN2Q8NDA2 5059 aa7.75□□□□□ -1.17
TRMT2A-201ENST00000252136 RNF213Q63HN8 5207 aa7.72□□□□□ -1.17
TRMT2A-201ENST00000252136 MT1FP04733 61 aa7.71□□□□□ -1.17
TRMT2A-201ENST00000252136 INE1O15225 51 aa7.71□□□□□ -1.18
TRMT2A-201ENST00000252136 UBR4Q5T4S7 5183 aa7.68□□□□□ -1.18
TRMT2A-201ENST00000252136 KRTAP12-3P60328 96 aa7.66□□□□□ -1.18
TRMT2A-201ENST00000252136 MT2AP02795 61 aa7.66□□□□□ -1.18
TRMT2A-201ENST00000252136 MT1HP80294 61 aa7.65□□□□□ -1.18
TRMT2A-201ENST00000252136 KRTAP10-12P60413 245 aa7.59□□□□□ -1.19
TRMT2A-201ENST00000252136 KRTAP10-5P60370 271 aa7.59□□□□□ -1.2
TRMT2A-201ENST00000252136 MT1XP80297 61 aa7.56□□□□□ -1.2
TRMT2A-201ENST00000252136 KRTAP9-8Q9BYQ0 159 aa7.53□□□□□ -1.2
TRMT2A-201ENST00000252136 KRTAP19-8Q3LI54 63 aa7.51□□□□□ -1.21
TRMT2A-201ENST00000252136 MT1BP07438 61 aa7.5□□□□□ -1.21
TRMT2A-201ENST00000252136 KRTAP10-7P60409 375 aaPredicted RBP7.47□□□□□ -1.21
TRMT2A-201ENST00000252136 KRTAP19-5Q3LI72 72 aa7.23□□□□□ -1.25
TRMT2A-201ENST00000252136 KMT2DO14686 5537 aa7.21□□□□□ -1.26
TRMT2A-201ENST00000252136 LCE3CQ5T5A8 94 aa7.2□□□□□ -1.26
TRMT2A-201ENST00000252136 KRTAP9-3Q9BYQ3 159 aa7.17□□□□□ -1.26
TRMT2A-201ENST00000252136 USH2AO75445 5202 aa7.09□□□□□ -1.27
TRMT2A-201ENST00000252136 KRTAP9-6A8MVA2 160 aa7.04□□□□□ -1.28
TRMT2A-201ENST00000252136 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
TRMT2A-201ENST00000252136 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
TRMT2A-201ENST00000252136 KRTAP4-7Q9BYR0 210 aa6.92□□□□□ -1.3
TRMT2A-201ENST00000252136 LCE2BO14633 110 aa6.89□□□□□ -1.31
TRMT2A-201ENST00000252136 KRTAP2-3P0C7H8 128 aa6.81□□□□□ -1.32
TRMT2A-201ENST00000252136 KRTAP2-4Q9BYR9 128 aa6.81□□□□□ -1.32
TRMT2A-201ENST00000252136 KRTAP2-1Q9BYU5 128 aa6.81□□□□□ -1.32
TRMT2A-201ENST00000252136 KRTAP19-7Q3SYF9 63 aa6.73□□□□□ -1.33
TRMT2A-201ENST00000252136 MT1LQ93083 61 aa6.57□□□□□ -1.36
TRMT2A-201ENST00000252136 MT1EP04732 61 aa6.49□□□□□ -1.37
TRMT2A-201ENST00000252136 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
TRMT2A-201ENST00000252136 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
TRMT2A-201ENST00000252136 KRTAP4-3Q9BYR4 195 aa6.36□□□□□ -1.39
TRMT2A-201ENST00000252136 CRCT1Q9UGL9 99 aa6.34□□□□□ -1.39
TRMT2A-201ENST00000252136 MT1GP13640 62 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms