RNA–Protein interactions for RNA: ENST00000247182.6

SIX1-201, Transcript of SIX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX1, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-201ENST00000247182 VPS13BQ7Z7G8 4022 aa5.19□□□□□ -1.58
SIX1-201ENST00000247182 KRTAP15-1Q3LI76 137 aa5.18□□□□□ -1.58
SIX1-201ENST00000247182 KRTAP13-4Q3LI77 160 aa5.18□□□□□ -1.58
SIX1-201ENST00000247182 KRTAP12-2P59991 146 aa5.16□□□□□ -1.58
SIX1-201ENST00000247182 DYNC2H1Q8NCM8 4307 aaKnown RBP5.15□□□□□ -1.58
SIX1-201ENST00000247182 KRTAP10-8P60410 259 aa5.15□□□□□ -1.58
SIX1-201ENST00000247182 ALMS1Q8TCU4 4167 aa5.14□□□□□ -1.59
SIX1-201ENST00000247182 MYCBP2O75592 4640 aa5.13□□□□□ -1.59
SIX1-201ENST00000247182 PKHD1P08F94 4074 aa5.12□□□□□ -1.59
SIX1-201ENST00000247182 Q5VSD8 79 aa5.09□□□□□ -1.6
SIX1-201ENST00000247182 FAT2Q9NYQ8 4349 aa5.09□□□□□ -1.6
SIX1-201ENST00000247182 KRTAP10-6P60371 365 aaPredicted RBP5.07□□□□□ -1.6
SIX1-201ENST00000247182 DYNC1H1Q14204 4646 aaKnown RBP5.06□□□□□ -1.6
SIX1-201ENST00000247182 RPS29P62273 56 aaKnown RBP5.03□□□□□ -1.6
SIX1-201ENST00000247182 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
SIX1-201ENST00000247182 LRP1Q07954 4544 aaKnown RBP5.02□□□□□ -1.61
SIX1-201ENST00000247182 M0R2T5 61 aa4.98□□□□□ -1.61
SIX1-201ENST00000247182 SEC61BP60468 96 aaKnown RBP4.97□□□□□ -1.61
SIX1-201ENST00000247182 XP32Q5T750 250 aa4.96□□□□□ -1.62
SIX1-201ENST00000247182 FAT3Q8TDW7 4589 aa4.96□□□□□ -1.62
SIX1-201ENST00000247182 A0A1B0GVY2 172 aa4.96□□□□□ -1.62
SIX1-201ENST00000247182 PKD1P98161 4303 aa4.95□□□□□ -1.62
SIX1-201ENST00000247182 SACSQ9NZJ4 4579 aa4.93□□□□□ -1.62
SIX1-201ENST00000247182 KRTAP10-4P60372 401 aaPredicted RBP4.93□□□□□ -1.62
SIX1-201ENST00000247182 KRTAP3-2Q9BYR7 98 aa4.93□□□□□ -1.62
SIX1-201ENST00000247182 APOBP04114 4563 aaKnown RBP4.93□□□□□ -1.62
SIX1-201ENST00000247182 KRTAP3-3Q9BYR6 98 aa4.89□□□□□ -1.63
SIX1-201ENST00000247182 KMT2CQ8NEZ4 4911 aaKnown RBP4.86□□□□□ -1.63
SIX1-201ENST00000247182 KIAA1109Q2LD37 5005 aa4.86□□□□□ -1.63
SIX1-201ENST00000247182 PP632Q6XCG6 107 aa4.81□□□□□ -1.64
SIX1-201ENST00000247182 RYR1P21817 5038 aa4.8□□□□□ -1.64
SIX1-201ENST00000247182 HSPG2P98160 4391 aa4.8□□□□□ -1.64
SIX1-201ENST00000247182 TNP1P09430 55 aa4.78□□□□□ -1.64
SIX1-201ENST00000247182 LRP2P98164 4655 aa4.77□□□□□ -1.65
SIX1-201ENST00000247182 KRTAP17-1Q9BYP8 105 aa4.77□□□□□ -1.65
SIX1-201ENST00000247182 RYR3Q15413 4870 aa4.75□□□□□ -1.65
SIX1-201ENST00000247182 MT1HL1P0DM35 61 aa4.71□□□□□ -1.66
SIX1-201ENST00000247182 RYR2Q92736 4967 aa4.71□□□□□ -1.66
SIX1-201ENST00000247182 LPAP08519 4548 aa4.7□□□□□ -1.66
SIX1-201ENST00000247182 KRTAP4-5Q9BYR2 181 aa4.69□□□□□ -1.66
SIX1-201ENST00000247182 PKHD1L1Q86WI1 4243 aa4.69□□□□□ -1.66
SIX1-201ENST00000247182 LORP23490 312 aaPredicted RBP4.62□□□□□ -1.67
SIX1-201ENST00000247182 BIRC6Q9NR09 4857 aa4.57□□□□□ -1.68
SIX1-201ENST00000247182 TNXBP22105 4242 aa4.56□□□□□ -1.68
SIX1-201ENST00000247182 EPPK1P58107 5090 aaKnown RBP4.55□□□□□ -1.68
SIX1-201ENST00000247182 ABCA13Q86UQ4 5058 aa4.55□□□□□ -1.68
SIX1-201ENST00000247182 MUC2Q02817 5179 aa4.52□□□□□ -1.69
SIX1-201ENST00000247182 PRO2289Q9P1D8 64 aa4.52□□□□□ -1.69
SIX1-201ENST00000247182 KRTAP4-1Q9BYQ7 146 aa4.5□□□□□ -1.69
SIX1-201ENST00000247182 LCE2DQ5TA82 110 aaPredicted RBP4.41□□□□□ -1.7
SIX1-201ENST00000247182 HERC2O95714 4834 aa4.41□□□□□ -1.7
SIX1-201ENST00000247182 INE1O15225 51 aa4.37□□□□□ -1.71
SIX1-201ENST00000247182 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
SIX1-201ENST00000247182 FAT4Q6V0I7 4981 aa4.31□□□□□ -1.72
SIX1-201ENST00000247182 RNF213Q63HN8 5207 aa4.26□□□□□ -1.73
SIX1-201ENST00000247182 HERC1Q15751 4861 aa4.25□□□□□ -1.73
SIX1-201ENST00000247182 PCLOQ9Y6V0 5065 aa4.24□□□□□ -1.73
SIX1-201ENST00000247182 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
SIX1-201ENST00000247182 MUC17Q685J3 4493 aa4.15□□□□□ -1.74
SIX1-201ENST00000247182 LCE2CQ5TA81 110 aa4.15□□□□□ -1.74
SIX1-201ENST00000247182 KRTAP23-1A1A580 65 aa4.11□□□□□ -1.75
SIX1-201ENST00000247182 LCE2AQ5TA79 106 aaPredicted RBP4.11□□□□□ -1.75
SIX1-201ENST00000247182 KRTAP19-2Q3LHN2 52 aa4.1□□□□□ -1.75
SIX1-201ENST00000247182 UBR4Q5T4S7 5183 aa4.08□□□□□ -1.76
SIX1-201ENST00000247182 KRTAP12-3P60328 96 aa4.07□□□□□ -1.76
SIX1-201ENST00000247182 SPRR5A0A1B0GTR4 108 aa4.06□□□□□ -1.76
SIX1-201ENST00000247182 FSIP2Q5CZC0 6907 aa4.06□□□□□ -1.76
SIX1-201ENST00000247182 LCE2BO14633 110 aa4.06□□□□□ -1.76
SIX1-201ENST00000247182 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
SIX1-201ENST00000247182 FLGP20930 4061 aaPredicted RBP4.02□□□□□ -1.77
SIX1-201ENST00000247182 KRTAP10-12P60413 245 aa4□□□□□ -1.77
SIX1-201ENST00000247182 KRTAP19-1Q8IUB9 90 aa3.98□□□□□ -1.77
SIX1-201ENST00000247182 MT1FP04733 61 aa3.98□□□□□ -1.77
SIX1-201ENST00000247182 MT1HP80294 61 aa3.96□□□□□ -1.77
SIX1-201ENST00000247182 MT2AP02795 61 aa3.94□□□□□ -1.78
SIX1-201ENST00000247182 SPRR2GQ9BYE4 73 aa3.91□□□□□ -1.78
SIX1-201ENST00000247182 USH2AO75445 5202 aa3.87□□□□□ -1.79
SIX1-201ENST00000247182 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
SIX1-201ENST00000247182 KMT2DO14686 5537 aa3.81□□□□□ -1.8
SIX1-201ENST00000247182 KRTAP9-8Q9BYQ0 159 aa3.81□□□□□ -1.8
SIX1-201ENST00000247182 KRTAP10-7P60409 375 aaPredicted RBP3.8□□□□□ -1.8
SIX1-201ENST00000247182 CRCT1Q9UGL9 99 aa3.77□□□□□ -1.81
SIX1-201ENST00000247182 MT1BP07438 61 aa3.76□□□□□ -1.81
SIX1-201ENST00000247182 MT1XP80297 61 aa3.76□□□□□ -1.81
SIX1-201ENST00000247182 KRTAP10-5P60370 271 aa3.76□□□□□ -1.81
SIX1-201ENST00000247182 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
SIX1-201ENST00000247182 KRTAP4-8A0A0G2JLE6 195 aa3.68□□□□□ -1.82
SIX1-201ENST00000247182 KRTAP4-8Q9BYQ9 185 aa3.68□□□□□ -1.82
SIX1-201ENST00000247182 KRTAP19-5Q3LI72 72 aa3.68□□□□□ -1.82
SIX1-201ENST00000247182 KRTAP19-8Q3LI54 63 aa3.67□□□□□ -1.82
SIX1-201ENST00000247182 KRTAP9-3Q9BYQ3 159 aa3.62□□□□□ -1.83
SIX1-201ENST00000247182 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
SIX1-201ENST00000247182 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
SIX1-201ENST00000247182 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
SIX1-201ENST00000247182 DSTQ03001 7570 aaKnown RBP3.53□□□□□ -1.84
SIX1-201ENST00000247182 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
SIX1-201ENST00000247182 KRTAP9-2Q9BYQ4 174 aa3.5□□□□□ -1.85
SIX1-201ENST00000247182 FCGBPQ9Y6R7 5405 aaPredicted RBP3.46□□□□□ -1.85
SIX1-201ENST00000247182 KRTAP9-6A0A140TA67 174 aa3.42□□□□□ -1.86
SIX1-201ENST00000247182 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms