RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 NDUFAF8A1L188 74 aa6.91□□□□□ -1.3
NCLN-201ENST00000246117 KRTAP13-4Q3LI77 160 aa6.88□□□□□ -1.31
NCLN-201ENST00000246117 LUZP6Q538Z0 58 aa6.85□□□□□ -1.31
NCLN-201ENST00000246117 DYNC1H1Q14204 4646 aaKnown RBP6.84□□□□□ -1.31
NCLN-201ENST00000246117 VPS13BQ7Z7G8 4022 aa6.82□□□□□ -1.32
NCLN-201ENST00000246117 KRTAP12-2P59991 146 aa6.82□□□□□ -1.32
NCLN-201ENST00000246117 DNAH3Q8TD57 4116 aa6.82□□□□□ -1.32
NCLN-201ENST00000246117 FAT3Q8TDW7 4589 aa6.8□□□□□ -1.32
NCLN-201ENST00000246117 KRTAP10-4P60372 401 aaPredicted RBP6.79□□□□□ -1.32
NCLN-201ENST00000246117 KRTAP10-6P60371 365 aaPredicted RBP6.78□□□□□ -1.32
NCLN-201ENST00000246117 HECTD4Q9Y4D8 3996 aa6.75□□□□□ -1.33
NCLN-201ENST00000246117 LRP1Q07954 4544 aaKnown RBP6.75□□□□□ -1.33
NCLN-201ENST00000246117 TPRXLQ17RH7 258 aa6.74□□□□□ -1.33
NCLN-201ENST00000246117 HYDINQ4G0P3 5121 aa6.74□□□□□ -1.33
NCLN-201ENST00000246117 KIAA1109Q2LD37 5005 aa6.73□□□□□ -1.33
NCLN-201ENST00000246117 RYR1P21817 5038 aa6.71□□□□□ -1.33
NCLN-201ENST00000246117 PKHD1P08F94 4074 aa6.71□□□□□ -1.34
NCLN-201ENST00000246117 KRTAP4-5Q9BYR2 181 aa6.69□□□□□ -1.34
NCLN-201ENST00000246117 KRTAP3-3Q9BYR6 98 aa6.69□□□□□ -1.34
NCLN-201ENST00000246117 DYNC2H1Q8NCM8 4307 aaKnown RBP6.67□□□□□ -1.34
NCLN-201ENST00000246117 SACSQ9NZJ4 4579 aa6.67□□□□□ -1.34
NCLN-201ENST00000246117 MT1HL1P0DM35 61 aa6.66□□□□□ -1.34
NCLN-201ENST00000246117 KRTAP12-1P59990 96 aa6.66□□□□□ -1.34
NCLN-201ENST00000246117 KRTAP3-2Q9BYR7 98 aa6.62□□□□□ -1.35
NCLN-201ENST00000246117 PLAC4Q8WY50 150 aa6.6□□□□□ -1.35
NCLN-201ENST00000246117 APOBP04114 4563 aaKnown RBP6.6□□□□□ -1.35
NCLN-201ENST00000246117 RYR3Q15413 4870 aa6.54□□□□□ -1.36
NCLN-201ENST00000246117 TNP1P09430 55 aa6.49□□□□□ -1.37
NCLN-201ENST00000246117 ALMS1Q8TCU4 4167 aa6.47□□□□□ -1.37
NCLN-201ENST00000246117 FAT2Q9NYQ8 4349 aa6.47□□□□□ -1.37
NCLN-201ENST00000246117 KMT2CQ8NEZ4 4911 aaKnown RBP6.47□□□□□ -1.37
NCLN-201ENST00000246117 LRP2P98164 4655 aa6.43□□□□□ -1.38
NCLN-201ENST00000246117 LORP23490 312 aaPredicted RBP6.41□□□□□ -1.38
NCLN-201ENST00000246117 A0A0A0MQY5 61 aa6.41□□□□□ -1.38
NCLN-201ENST00000246117 KRTAP10-10P60014 251 aa6.41□□□□□ -1.38
NCLN-201ENST00000246117 KRTAP17-1Q9BYP8 105 aa6.4□□□□□ -1.38
NCLN-201ENST00000246117 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
NCLN-201ENST00000246117 RYR2Q92736 4967 aa6.26□□□□□ -1.41
NCLN-201ENST00000246117 PKD1P98161 4303 aa6.25□□□□□ -1.41
NCLN-201ENST00000246117 KRTAP4-1Q9BYQ7 146 aa6.24□□□□□ -1.41
NCLN-201ENST00000246117 HSPG2P98160 4391 aa6.2□□□□□ -1.42
NCLN-201ENST00000246117 LPAP08519 4548 aa6.19□□□□□ -1.42
NCLN-201ENST00000246117 KRTAP15-1Q3LI76 137 aa6.14□□□□□ -1.43
NCLN-201ENST00000246117 EPPK1P58107 5090 aaKnown RBP6.12□□□□□ -1.43
NCLN-201ENST00000246117 HERC2O95714 4834 aa6.12□□□□□ -1.43
NCLN-201ENST00000246117 MUC2Q02817 5179 aa5.99□□□□□ -1.45
NCLN-201ENST00000246117 PKHD1L1Q86WI1 4243 aa5.96□□□□□ -1.46
NCLN-201ENST00000246117 ABCA13Q86UQ4 5058 aa5.92□□□□□ -1.46
NCLN-201ENST00000246117 PCLOQ9Y6V0 5065 aa5.86□□□□□ -1.47
NCLN-201ENST00000246117 TNXBP22105 4242 aa5.84□□□□□ -1.47
NCLN-201ENST00000246117 RNF213Q63HN8 5207 aa5.82□□□□□ -1.48
NCLN-201ENST00000246117 LCE3AQ5TA76 89 aa5.8□□□□□ -1.48
NCLN-201ENST00000246117 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
NCLN-201ENST00000246117 FAT4Q6V0I7 4981 aa5.77□□□□□ -1.49
NCLN-201ENST00000246117 HERC1Q15751 4861 aa5.76□□□□□ -1.49
NCLN-201ENST00000246117 KRTAP10-12P60413 245 aa5.67□□□□□ -1.5
NCLN-201ENST00000246117 MT1HP80294 61 aa5.65□□□□□ -1.5
NCLN-201ENST00000246117 MT1FP04733 61 aa5.63□□□□□ -1.51
NCLN-201ENST00000246117 FSIP2Q5CZC0 6907 aa5.62□□□□□ -1.51
NCLN-201ENST00000246117 MT2AP02795 61 aa5.62□□□□□ -1.51
NCLN-201ENST00000246117 KRTAP12-3P60328 96 aa5.61□□□□□ -1.51
NCLN-201ENST00000246117 UBR4Q5T4S7 5183 aa5.58□□□□□ -1.52
NCLN-201ENST00000246117 KRTAP23-1A1A580 65 aa5.55□□□□□ -1.52
NCLN-201ENST00000246117 BIRC6Q9NR09 4857 aa5.54□□□□□ -1.52
NCLN-201ENST00000246117 KRTAP19-1Q8IUB9 90 aa5.53□□□□□ -1.52
NCLN-201ENST00000246117 SPRR2GQ9BYE4 73 aa5.5□□□□□ -1.53
NCLN-201ENST00000246117 MUC17Q685J3 4493 aa5.49□□□□□ -1.53
NCLN-201ENST00000246117 CRCT1Q9UGL9 99 aa5.48□□□□□ -1.53
NCLN-201ENST00000246117 KRTAP19-2Q3LHN2 52 aa5.43□□□□□ -1.54
NCLN-201ENST00000246117 LCE2CQ5TA81 110 aa5.42□□□□□ -1.54
NCLN-201ENST00000246117 HMCN2Q8NDA2 5059 aa5.4□□□□□ -1.55
NCLN-201ENST00000246117 FLGP20930 4061 aaPredicted RBP5.39□□□□□ -1.55
NCLN-201ENST00000246117 KRTAP10-7P60409 375 aaPredicted RBP5.33□□□□□ -1.56
NCLN-201ENST00000246117 OBSCNQ5VST9 7968 aa5.32□□□□□ -1.56
NCLN-201ENST00000246117 KRTAP9-8Q9BYQ0 159 aa5.29□□□□□ -1.56
NCLN-201ENST00000246117 KRTAP19-5Q3LI72 72 aa5.25□□□□□ -1.57
NCLN-201ENST00000246117 MT1BP07438 61 aa5.24□□□□□ -1.57
NCLN-201ENST00000246117 MT1XP80297 61 aa5.24□□□□□ -1.57
NCLN-201ENST00000246117 KRTAP8-1Q8IUC2 63 aa5.22□□□□□ -1.57
NCLN-201ENST00000246117 USH2AO75445 5202 aa5.21□□□□□ -1.58
NCLN-201ENST00000246117 KRTAP10-5P60370 271 aa5.21□□□□□ -1.58
NCLN-201ENST00000246117 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
NCLN-201ENST00000246117 KRTAP4-8Q9BYQ9 185 aa5.2□□□□□ -1.58
NCLN-201ENST00000246117 INE1O15225 51 aa5.16□□□□□ -1.58
NCLN-201ENST00000246117 KRTAP19-8Q3LI54 63 aa5.14□□□□□ -1.59
NCLN-201ENST00000246117 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
NCLN-201ENST00000246117 KMT2DO14686 5537 aa5.09□□□□□ -1.6
NCLN-201ENST00000246117 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
NCLN-201ENST00000246117 DSTQ03001 7570 aaKnown RBP5.05□□□□□ -1.6
NCLN-201ENST00000246117 LCE3CQ5T5A8 94 aa5.02□□□□□ -1.61
NCLN-201ENST00000246117 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
NCLN-201ENST00000246117 LCE2BO14633 110 aa5□□□□□ -1.61
NCLN-201ENST00000246117 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
NCLN-201ENST00000246117 FCGBPQ9Y6R7 5405 aaPredicted RBP4.94□□□□□ -1.62
NCLN-201ENST00000246117 SPRR2FQ96RM1 72 aa4.83□□□□□ -1.64
NCLN-201ENST00000246117 MT1GP13640 62 aa4.76□□□□□ -1.65
NCLN-201ENST00000246117 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
NCLN-201ENST00000246117 LOC100996750A0A140TA64 210 aa4.65□□□□□ -1.67
NCLN-201ENST00000246117 KRTAP19-4Q3LI73 84 aa4.65□□□□□ -1.67
NCLN-201ENST00000246117 SYNE2Q8WXH0 6885 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms