RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 A0A1B0GU33 70 aa6.35□□□□□ -1.39
SEC61A1-201ENST00000243253 LINC01554Q52M75 96 aa6.35□□□□□ -1.39
SEC61A1-201ENST00000243253 A0A1B0GVY2 172 aa6.32□□□□□ -1.4
SEC61A1-201ENST00000243253 Q5VSD8 79 aa6.32□□□□□ -1.4
SEC61A1-201ENST00000243253 KIAA1109Q2LD37 5005 aa6.31□□□□□ -1.4
SEC61A1-201ENST00000243253 H1FX-AS1Q4G0G2 97 aa6.26□□□□□ -1.41
SEC61A1-201ENST00000243253 KRTAP3-3Q9BYR6 98 aa6.24□□□□□ -1.41
SEC61A1-201ENST00000243253 SPINT4Q6UDR6 99 aa6.23□□□□□ -1.41
SEC61A1-201ENST00000243253 LPAP08519 4548 aa6.23□□□□□ -1.41
SEC61A1-201ENST00000243253 COX6B2Q6YFQ2 88 aa6.2□□□□□ -1.42
SEC61A1-201ENST00000243253 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
SEC61A1-201ENST00000243253 RYR1P21817 5038 aa6.18□□□□□ -1.42
SEC61A1-201ENST00000243253 RYR3Q15413 4870 aa6.18□□□□□ -1.42
SEC61A1-201ENST00000243253 KRTAP25-1Q3LHN0 102 aa6.16□□□□□ -1.42
SEC61A1-201ENST00000243253 KRTAP3-2Q9BYR7 98 aa6.16□□□□□ -1.42
SEC61A1-201ENST00000243253 KRTAP10-8P60410 259 aa6.14□□□□□ -1.43
SEC61A1-201ENST00000243253 KRTAP13-4Q3LI77 160 aa6.13□□□□□ -1.43
SEC61A1-201ENST00000243253 LRP2P98164 4655 aa6.09□□□□□ -1.43
SEC61A1-201ENST00000243253 KRTAP17-1Q9BYP8 105 aa6.08□□□□□ -1.44
SEC61A1-201ENST00000243253 XP32Q5T750 250 aa6.06□□□□□ -1.44
SEC61A1-201ENST00000243253 C10orf95Q9H7T3 257 aa6.06□□□□□ -1.44
SEC61A1-201ENST00000243253 S4R3F8 94 aa6.05□□□□□ -1.44
SEC61A1-201ENST00000243253 RPL37P61927 97 aaKnown RBP6.04□□□□□ -1.44
SEC61A1-201ENST00000243253 A0A0A0MQY5 61 aa6.04□□□□□ -1.44
SEC61A1-201ENST00000243253 P0C880 135 aa6.03□□□□□ -1.44
SEC61A1-201ENST00000243253 EPPK1P58107 5090 aaKnown RBP6.01□□□□□ -1.45
SEC61A1-201ENST00000243253 ROMO1P60602 79 aa5.99□□□□□ -1.45
SEC61A1-201ENST00000243253 KRTAP4-5Q9BYR2 181 aa5.98□□□□□ -1.45
SEC61A1-201ENST00000243253 MUC2Q02817 5179 aa5.95□□□□□ -1.46
SEC61A1-201ENST00000243253 ABCA13Q86UQ4 5058 aa5.94□□□□□ -1.46
SEC61A1-201ENST00000243253 TPRXLQ17RH7 258 aa5.94□□□□□ -1.46
SEC61A1-201ENST00000243253 MT1HL1P0DM35 61 aa5.91□□□□□ -1.46
SEC61A1-201ENST00000243253 KRTAP12-2P59991 146 aa5.9□□□□□ -1.46
SEC61A1-201ENST00000243253 MUC17Q685J3 4493 aa5.89□□□□□ -1.47
SEC61A1-201ENST00000243253 M0QZ58 72 aa5.86□□□□□ -1.47
SEC61A1-201ENST00000243253 KRTAP12-1P59990 96 aa5.85□□□□□ -1.47
SEC61A1-201ENST00000243253 R4GN34 69 aa5.84□□□□□ -1.47
SEC61A1-201ENST00000243253 NDUFAF8A1L188 74 aa5.81□□□□□ -1.48
SEC61A1-201ENST00000243253 LCE2DQ5TA82 110 aaPredicted RBP5.79□□□□□ -1.48
SEC61A1-201ENST00000243253 KRTAP15-1Q3LI76 137 aa5.75□□□□□ -1.49
SEC61A1-201ENST00000243253 CAMK2N1Q7Z7J9 78 aa5.74□□□□□ -1.49
SEC61A1-201ENST00000243253 HERC2O95714 4834 aa5.72□□□□□ -1.49
SEC61A1-201ENST00000243253 BIRC6Q9NR09 4857 aa5.69□□□□□ -1.5
SEC61A1-201ENST00000243253 LORP23490 312 aaPredicted RBP5.65□□□□□ -1.5
SEC61A1-201ENST00000243253 RNF213Q63HN8 5207 aa5.65□□□□□ -1.5
SEC61A1-201ENST00000243253 HERC1Q15751 4861 aa5.65□□□□□ -1.51
SEC61A1-201ENST00000243253 FAT4Q6V0I7 4981 aa5.64□□□□□ -1.51
SEC61A1-201ENST00000243253 KRTAP19-2Q3LHN2 52 aa5.63□□□□□ -1.51
SEC61A1-201ENST00000243253 SEC61BP60468 96 aaKnown RBP5.62□□□□□ -1.51
SEC61A1-201ENST00000243253 FLGP20930 4061 aaPredicted RBP5.61□□□□□ -1.51
SEC61A1-201ENST00000243253 KRTAP4-1Q9BYQ7 146 aa5.6□□□□□ -1.51
SEC61A1-201ENST00000243253 M0R2T5 61 aa5.57□□□□□ -1.52
SEC61A1-201ENST00000243253 LUZP6Q538Z0 58 aa5.48□□□□□ -1.53
SEC61A1-201ENST00000243253 PCLOQ9Y6V0 5065 aa5.45□□□□□ -1.54
SEC61A1-201ENST00000243253 UBR4Q5T4S7 5183 aa5.43□□□□□ -1.54
SEC61A1-201ENST00000243253 PLAC4Q8WY50 150 aa5.4□□□□□ -1.55
SEC61A1-201ENST00000243253 HMCN2Q8NDA2 5059 aa5.31□□□□□ -1.56
SEC61A1-201ENST00000243253 LCE2CQ5TA81 110 aa5.27□□□□□ -1.57
SEC61A1-201ENST00000243253 LCE2AQ5TA79 106 aaPredicted RBP5.25□□□□□ -1.57
SEC61A1-201ENST00000243253 TNP1P09430 55 aa5.22□□□□□ -1.57
SEC61A1-201ENST00000243253 PP632Q6XCG6 107 aa5.22□□□□□ -1.57
SEC61A1-201ENST00000243253 KRTAP10-10P60014 251 aa5.21□□□□□ -1.58
SEC61A1-201ENST00000243253 LCE2BO14633 110 aa5.19□□□□□ -1.58
SEC61A1-201ENST00000243253 FSIP2Q5CZC0 6907 aa5.16□□□□□ -1.58
SEC61A1-201ENST00000243253 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.59
SEC61A1-201ENST00000243253 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
SEC61A1-201ENST00000243253 USH2AO75445 5202 aa5.1□□□□□ -1.59
SEC61A1-201ENST00000243253 SPRR2GQ9BYE4 73 aa5.08□□□□□ -1.6
SEC61A1-201ENST00000243253 KRTAP19-1Q8IUB9 90 aa5.08□□□□□ -1.6
SEC61A1-201ENST00000243253 MT1HP80294 61 aa4.95□□□□□ -1.62
SEC61A1-201ENST00000243253 MT1FP04733 61 aa4.94□□□□□ -1.62
SEC61A1-201ENST00000243253 KMT2DO14686 5537 aa4.94□□□□□ -1.62
SEC61A1-201ENST00000243253 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
SEC61A1-201ENST00000243253 KRTAP9-8Q9BYQ0 159 aa4.89□□□□□ -1.63
SEC61A1-201ENST00000243253 MT2AP02795 61 aa4.88□□□□□ -1.63
SEC61A1-201ENST00000243253 KRTAP19-8Q3LI54 63 aa4.84□□□□□ -1.63
SEC61A1-201ENST00000243253 KRTAP10-5P60370 271 aa4.8□□□□□ -1.64
SEC61A1-201ENST00000243253 KRTAP8-1Q8IUC2 63 aa4.79□□□□□ -1.64
SEC61A1-201ENST00000243253 MT1BP07438 61 aa4.79□□□□□ -1.64
SEC61A1-201ENST00000243253 MT1XP80297 61 aa4.78□□□□□ -1.64
SEC61A1-201ENST00000243253 KRTAP10-7P60409 375 aaPredicted RBP4.67□□□□□ -1.66
SEC61A1-201ENST00000243253 KRTAP10-12P60413 245 aa4.67□□□□□ -1.66
SEC61A1-201ENST00000243253 KRTAP9-3Q9BYQ3 159 aa4.67□□□□□ -1.66
SEC61A1-201ENST00000243253 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
SEC61A1-201ENST00000243253 DSTQ03001 7570 aaKnown RBP4.61□□□□□ -1.67
SEC61A1-201ENST00000243253 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
SEC61A1-201ENST00000243253 KRTAP4-8A0A0G2JLE6 195 aa4.57□□□□□ -1.68
SEC61A1-201ENST00000243253 KRTAP4-8Q9BYQ9 185 aa4.57□□□□□ -1.68
SEC61A1-201ENST00000243253 PRO2289Q9P1D8 64 aa4.57□□□□□ -1.68
SEC61A1-201ENST00000243253 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
SEC61A1-201ENST00000243253 FCGBPQ9Y6R7 5405 aaPredicted RBP4.45□□□□□ -1.7
SEC61A1-201ENST00000243253 KRTAP4-7Q9BYR0 210 aa4.43□□□□□ -1.7
SEC61A1-201ENST00000243253 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
SEC61A1-201ENST00000243253 CRCT1Q9UGL9 99 aa4.42□□□□□ -1.7
SEC61A1-201ENST00000243253 INE1O15225 51 aa4.4□□□□□ -1.7
SEC61A1-201ENST00000243253 MUC12Q9UKN1 5478 aa4.39□□□□□ -1.71
SEC61A1-201ENST00000243253 LCE3CQ5T5A8 94 aa4.38□□□□□ -1.71
SEC61A1-201ENST00000243253 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
SEC61A1-201ENST00000243253 SSPOA2VEC9 5147 aa4.3□□□□□ -1.72
SEC61A1-201ENST00000243253 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms