RNA–Protein interactions for RNA: ENST00000243052.7

PDE1B-201, Transcript of phosphodiesterase 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE1B, Length 3,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-201ENST00000243052 PKD1P98161 4303 aa8.36□□□□□ -1.07
PDE1B-201ENST00000243052 KRTAP10-6P60371 365 aaPredicted RBP8.35□□□□□ -1.07
PDE1B-201ENST00000243052 KRTAP12-2P59991 146 aa8.32□□□□□ -1.08
PDE1B-201ENST00000243052 RPS29P62273 56 aaKnown RBP8.31□□□□□ -1.08
PDE1B-201ENST00000243052 LUZP6Q538Z0 58 aa8.29□□□□□ -1.08
PDE1B-201ENST00000243052 DYNC1H1Q14204 4646 aaKnown RBP8.26□□□□□ -1.09
PDE1B-201ENST00000243052 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
PDE1B-201ENST00000243052 KRTAP3-3Q9BYR6 98 aa8.18□□□□□ -1.1
PDE1B-201ENST00000243052 SACSQ9NZJ4 4579 aa8.16□□□□□ -1.1
PDE1B-201ENST00000243052 KRTAP10-4P60372 401 aaPredicted RBP8.13□□□□□ -1.11
PDE1B-201ENST00000243052 MYCBP2O75592 4640 aa8.12□□□□□ -1.11
PDE1B-201ENST00000243052 A0A1B0GVY2 172 aa8.12□□□□□ -1.11
PDE1B-201ENST00000243052 KRTAP12-1P59990 96 aa8.11□□□□□ -1.11
PDE1B-201ENST00000243052 LRP1Q07954 4544 aaKnown RBP8.09□□□□□ -1.11
PDE1B-201ENST00000243052 KRTAP10-8P60410 259 aa8.09□□□□□ -1.12
PDE1B-201ENST00000243052 Q5VSD8 79 aa8.09□□□□□ -1.12
PDE1B-201ENST00000243052 PLAC4Q8WY50 150 aa8.02□□□□□ -1.13
PDE1B-201ENST00000243052 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
PDE1B-201ENST00000243052 XP32Q5T750 250 aa8.01□□□□□ -1.13
PDE1B-201ENST00000243052 KMT2CQ8NEZ4 4911 aaKnown RBP7.98□□□□□ -1.13
PDE1B-201ENST00000243052 M0QZ58 72 aa7.92□□□□□ -1.14
PDE1B-201ENST00000243052 HSPG2P98160 4391 aa7.88□□□□□ -1.15
PDE1B-201ENST00000243052 PKHD1L1Q86WI1 4243 aa7.87□□□□□ -1.15
PDE1B-201ENST00000243052 R4GN34 69 aa7.85□□□□□ -1.15
PDE1B-201ENST00000243052 FAT3Q8TDW7 4589 aa7.84□□□□□ -1.15
PDE1B-201ENST00000243052 RYR2Q92736 4967 aa7.79□□□□□ -1.16
PDE1B-201ENST00000243052 KRTAP17-1Q9BYP8 105 aa7.75□□□□□ -1.17
PDE1B-201ENST00000243052 KIAA1109Q2LD37 5005 aa7.74□□□□□ -1.17
PDE1B-201ENST00000243052 KRTAP21-3Q3LHN1 58 aa7.74□□□□□ -1.17
PDE1B-201ENST00000243052 LPAP08519 4548 aa7.69□□□□□ -1.18
PDE1B-201ENST00000243052 TNXBP22105 4242 aa7.68□□□□□ -1.18
PDE1B-201ENST00000243052 LRP2P98164 4655 aa7.68□□□□□ -1.18
PDE1B-201ENST00000243052 MT1HL1P0DM35 61 aa7.67□□□□□ -1.18
PDE1B-201ENST00000243052 CAMK2N1Q7Z7J9 78 aa7.65□□□□□ -1.19
PDE1B-201ENST00000243052 RYR1P21817 5038 aa7.63□□□□□ -1.19
PDE1B-201ENST00000243052 RYR3Q15413 4870 aa7.63□□□□□ -1.19
PDE1B-201ENST00000243052 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
PDE1B-201ENST00000243052 KRTAP4-5Q9BYR2 181 aa7.47□□□□□ -1.21
PDE1B-201ENST00000243052 EPPK1P58107 5090 aaKnown RBP7.47□□□□□ -1.21
PDE1B-201ENST00000243052 J3QL48 77 aa7.45□□□□□ -1.22
PDE1B-201ENST00000243052 ABCA13Q86UQ4 5058 aa7.41□□□□□ -1.22
PDE1B-201ENST00000243052 SEC61BP60468 96 aaKnown RBP7.39□□□□□ -1.23
PDE1B-201ENST00000243052 PP632Q6XCG6 107 aa7.38□□□□□ -1.23
PDE1B-201ENST00000243052 KRTAP4-1Q9BYQ7 146 aa7.28□□□□□ -1.24
PDE1B-201ENST00000243052 TNP1P09430 55 aa7.2□□□□□ -1.26
PDE1B-201ENST00000243052 MUC2Q02817 5179 aa7.17□□□□□ -1.26
PDE1B-201ENST00000243052 HERC2O95714 4834 aa7.08□□□□□ -1.28
PDE1B-201ENST00000243052 PRO2289Q9P1D8 64 aa7□□□□□ -1.29
PDE1B-201ENST00000243052 MUC17Q685J3 4493 aa6.98□□□□□ -1.29
PDE1B-201ENST00000243052 HERC1Q15751 4861 aa6.95□□□□□ -1.3
PDE1B-201ENST00000243052 M0R2T5 61 aa6.95□□□□□ -1.3
PDE1B-201ENST00000243052 SPRR5A0A1B0GTR4 108 aa6.9□□□□□ -1.31
PDE1B-201ENST00000243052 KRTAP19-2Q3LHN2 52 aa6.86□□□□□ -1.31
PDE1B-201ENST00000243052 RNF213Q63HN8 5207 aa6.86□□□□□ -1.31
PDE1B-201ENST00000243052 PCLOQ9Y6V0 5065 aa6.83□□□□□ -1.32
PDE1B-201ENST00000243052 FAT4Q6V0I7 4981 aa6.81□□□□□ -1.32
PDE1B-201ENST00000243052 LCE3AQ5TA76 89 aa6.73□□□□□ -1.33
PDE1B-201ENST00000243052 INE1O15225 51 aa6.72□□□□□ -1.33
PDE1B-201ENST00000243052 BIRC6Q9NR09 4857 aa6.68□□□□□ -1.34
PDE1B-201ENST00000243052 FLGP20930 4061 aaPredicted RBP6.67□□□□□ -1.34
PDE1B-201ENST00000243052 UBR4Q5T4S7 5183 aa6.66□□□□□ -1.34
PDE1B-201ENST00000243052 KRTAP23-1A1A580 65 aa6.66□□□□□ -1.34
PDE1B-201ENST00000243052 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
PDE1B-201ENST00000243052 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
PDE1B-201ENST00000243052 LCE2CQ5TA81 110 aa6.51□□□□□ -1.37
PDE1B-201ENST00000243052 HMCN2Q8NDA2 5059 aa6.46□□□□□ -1.38
PDE1B-201ENST00000243052 SPRR2GQ9BYE4 73 aa6.45□□□□□ -1.38
PDE1B-201ENST00000243052 MT1HP80294 61 aa6.43□□□□□ -1.38
PDE1B-201ENST00000243052 MT1FP04733 61 aa6.43□□□□□ -1.38
PDE1B-201ENST00000243052 MT2AP02795 61 aa6.38□□□□□ -1.39
PDE1B-201ENST00000243052 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
PDE1B-201ENST00000243052 KRTAP8-1Q8IUC2 63 aa6.28□□□□□ -1.4
PDE1B-201ENST00000243052 KRTAP9-8Q9BYQ0 159 aa6.24□□□□□ -1.41
PDE1B-201ENST00000243052 KRTAP10-12P60413 245 aa6.22□□□□□ -1.41
PDE1B-201ENST00000243052 FSIP2Q5CZC0 6907 aa6.21□□□□□ -1.42
PDE1B-201ENST00000243052 KRTAP10-5P60370 271 aa6.15□□□□□ -1.42
PDE1B-201ENST00000243052 MT1BP07438 61 aa6.15□□□□□ -1.42
PDE1B-201ENST00000243052 MT1XP80297 61 aa6.15□□□□□ -1.42
PDE1B-201ENST00000243052 KRTAP10-7P60409 375 aaPredicted RBP6.12□□□□□ -1.43
PDE1B-201ENST00000243052 KRTAP19-8Q3LI54 63 aa6.09□□□□□ -1.44
PDE1B-201ENST00000243052 KMT2DO14686 5537 aa6.08□□□□□ -1.44
PDE1B-201ENST00000243052 USH2AO75445 5202 aa6.06□□□□□ -1.44
PDE1B-201ENST00000243052 KRTAP9-3Q9BYQ3 159 aa5.95□□□□□ -1.46
PDE1B-201ENST00000243052 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
PDE1B-201ENST00000243052 OBSCNQ5VST9 7968 aa5.91□□□□□ -1.46
PDE1B-201ENST00000243052 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.46
PDE1B-201ENST00000243052 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.48
PDE1B-201ENST00000243052 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.48
PDE1B-201ENST00000243052 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
PDE1B-201ENST00000243052 LCE2BO14633 110 aa5.8□□□□□ -1.48
PDE1B-201ENST00000243052 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
PDE1B-201ENST00000243052 CRCT1Q9UGL9 99 aa5.76□□□□□ -1.49
PDE1B-201ENST00000243052 SYNE1Q8NF91 8797 aaKnown RBP5.71□□□□□ -1.49
PDE1B-201ENST00000243052 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
PDE1B-201ENST00000243052 FCGBPQ9Y6R7 5405 aaPredicted RBP5.59□□□□□ -1.51
PDE1B-201ENST00000243052 KRTAP2-3P0C7H8 128 aa5.57□□□□□ -1.52
PDE1B-201ENST00000243052 KRTAP2-4Q9BYR9 128 aa5.57□□□□□ -1.52
PDE1B-201ENST00000243052 KRTAP2-1Q9BYU5 128 aa5.57□□□□□ -1.52
PDE1B-201ENST00000243052 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
PDE1B-201ENST00000243052 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms