RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
CXCR4-201ENST00000241393 CDC42SE1Q9NRR8 79 aa4.35□□□□□ -1.71
CXCR4-201ENST00000241393 ATP11AUNQ6ZP68 121 aa4.35□□□□□ -1.71
CXCR4-201ENST00000241393 LINC00304Q8N9R0 145 aa4.35□□□□□ -1.71
CXCR4-201ENST00000241393 A8MU10 97 aa4.34□□□□□ -1.71
CXCR4-201ENST00000241393 LCA10Q71F78 164 aa4.33□□□□□ -1.72
CXCR4-201ENST00000241393 VPS13BQ7Z7G8 4022 aa4.32□□□□□ -1.72
CXCR4-201ENST00000241393 RETNLBQ9BQ08 111 aa4.32□□□□□ -1.72
CXCR4-201ENST00000241393 A0A1B0GVY2 172 aa4.31□□□□□ -1.72
CXCR4-201ENST00000241393 PMAIP1Q13794 54 aa4.31□□□□□ -1.72
CXCR4-201ENST00000241393 C7orf65Q6ZTY9 151 aa4.3□□□□□ -1.72
CXCR4-201ENST00000241393 HYDINQ4G0P3 5121 aa4.3□□□□□ -1.72
CXCR4-201ENST00000241393 SACSQ9NZJ4 4579 aa4.29□□□□□ -1.72
CXCR4-201ENST00000241393 SPINK7P58062 85 aa4.28□□□□□ -1.72
CXCR4-201ENST00000241393 KRTAP10-4P60372 401 aaPredicted RBP4.27□□□□□ -1.73
CXCR4-201ENST00000241393 C20orf166-AS1Q96NR2 134 aa4.27□□□□□ -1.73
CXCR4-201ENST00000241393 A0A1B0GU69 56 aa4.26□□□□□ -1.73
CXCR4-201ENST00000241393 A8MUU9 505 aa4.26□□□□□ -1.73
CXCR4-201ENST00000241393 KRTAP10-5P60370 271 aa4.26□□□□□ -1.73
CXCR4-201ENST00000241393 SPTSSBQ8NFR3 76 aa4.26□□□□□ -1.73
CXCR4-201ENST00000241393 A6NN06 94 aa4.25□□□□□ -1.73
CXCR4-201ENST00000241393 SMR3BP02814 79 aaPredicted RBP4.24□□□□□ -1.73
CXCR4-201ENST00000241393 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
CXCR4-201ENST00000241393 DYNC1H1Q14204 4646 aaKnown RBP4.22□□□□□ -1.73
CXCR4-201ENST00000241393 SPATA8Q6RVD6 105 aa4.22□□□□□ -1.73
CXCR4-201ENST00000241393 SEC61GP60059 68 aa4.21□□□□□ -1.74
CXCR4-201ENST00000241393 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
CXCR4-201ENST00000241393 PKHD1P08F94 4074 aa4.21□□□□□ -1.74
CXCR4-201ENST00000241393 UQCR11O14957 56 aa4.2□□□□□ -1.74
CXCR4-201ENST00000241393 PKHD1L1Q86WI1 4243 aa4.2□□□□□ -1.74
CXCR4-201ENST00000241393 APOBP04114 4563 aaKnown RBP4.18□□□□□ -1.74
CXCR4-201ENST00000241393 C9orf92A6NGG3 77 aa4.17□□□□□ -1.74
CXCR4-201ENST00000241393 MIR22HGQ0VDD5 57 aa4.17□□□□□ -1.74
CXCR4-201ENST00000241393 FAT1Q14517 4588 aa4.14□□□□□ -1.75
CXCR4-201ENST00000241393 KRTAP10-8P60410 259 aa4.13□□□□□ -1.75
CXCR4-201ENST00000241393 FLG2Q5D862 2391 aaPredicted RBP4.13□□□□□ -1.75
CXCR4-201ENST00000241393 COX6B2Q6YFQ2 88 aa4.12□□□□□ -1.75
CXCR4-201ENST00000241393 CAMK2N1Q7Z7J9 78 aa4.1□□□□□ -1.75
CXCR4-201ENST00000241393 RYR2Q92736 4967 aa4.1□□□□□ -1.75
CXCR4-201ENST00000241393 KMT2CQ8NEZ4 4911 aaKnown RBP4.08□□□□□ -1.76
CXCR4-201ENST00000241393 Q5VSD8 79 aa4.08□□□□□ -1.76
CXCR4-201ENST00000241393 RPL37P61927 97 aaKnown RBP4.07□□□□□ -1.76
CXCR4-201ENST00000241393 RBM12B-AS1Q9P1G2 102 aa4.07□□□□□ -1.76
CXCR4-201ENST00000241393 A0A1B0GU33 70 aa4.05□□□□□ -1.76
CXCR4-201ENST00000241393 H1FX-AS1Q4G0G2 97 aa4.04□□□□□ -1.76
CXCR4-201ENST00000241393 H0YAA0 97 aa4.03□□□□□ -1.76
CXCR4-201ENST00000241393 FAT3Q8TDW7 4589 aa4.03□□□□□ -1.76
CXCR4-201ENST00000241393 TNXBP22105 4242 aa4.02□□□□□ -1.77
CXCR4-201ENST00000241393 RYR3Q15413 4870 aa4□□□□□ -1.77
CXCR4-201ENST00000241393 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
CXCR4-201ENST00000241393 HSPG2P98160 4391 aa3.99□□□□□ -1.77
CXCR4-201ENST00000241393 MT1HL1P0DM35 61 aa3.98□□□□□ -1.77
CXCR4-201ENST00000241393 DMBT1Q9UGM3 2413 aaPredicted RBP3.97□□□□□ -1.77
CXCR4-201ENST00000241393 LRP1Q07954 4544 aaKnown RBP3.97□□□□□ -1.77
CXCR4-201ENST00000241393 ADM2Q7Z4H4 148 aa3.96□□□□□ -1.78
CXCR4-201ENST00000241393 RYR1P21817 5038 aa3.96□□□□□ -1.78
CXCR4-201ENST00000241393 K7ERS5 55 aa3.95□□□□□ -1.78
CXCR4-201ENST00000241393 S4R3F8 94 aa3.95□□□□□ -1.78
CXCR4-201ENST00000241393 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
CXCR4-201ENST00000241393 TPRXLQ17RH7 258 aa3.94□□□□□ -1.78
CXCR4-201ENST00000241393 LINC01554Q52M75 96 aa3.9□□□□□ -1.79
CXCR4-201ENST00000241393 KRTAP12-2P59991 146 aa3.89□□□□□ -1.79
CXCR4-201ENST00000241393 CSAG1Q6PB30 78 aa3.89□□□□□ -1.79
CXCR4-201ENST00000241393 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
CXCR4-201ENST00000241393 KIAA1109Q2LD37 5005 aa3.85□□□□□ -1.79
CXCR4-201ENST00000241393 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
CXCR4-201ENST00000241393 EPPK1P58107 5090 aaKnown RBP3.84□□□□□ -1.8
CXCR4-201ENST00000241393 MYCBP2O75592 4640 aa3.84□□□□□ -1.8
CXCR4-201ENST00000241393 KRTAP13-4Q3LI77 160 aa3.84□□□□□ -1.8
CXCR4-201ENST00000241393 P0C880 135 aa3.82□□□□□ -1.8
CXCR4-201ENST00000241393 ROMO1P60602 79 aa3.82□□□□□ -1.8
CXCR4-201ENST00000241393 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
CXCR4-201ENST00000241393 M0QZ58 72 aa3.8□□□□□ -1.8
CXCR4-201ENST00000241393 A0A0D9SG42 100 aa3.78□□□□□ -1.81
CXCR4-201ENST00000241393 LRP2P98164 4655 aa3.74□□□□□ -1.81
CXCR4-201ENST00000241393 KRTAP12-1P59990 96 aa3.73□□□□□ -1.81
CXCR4-201ENST00000241393 LPAP08519 4548 aa3.68□□□□□ -1.82
CXCR4-201ENST00000241393 SPINT4Q6UDR6 99 aa3.68□□□□□ -1.82
CXCR4-201ENST00000241393 BIRC6Q9NR09 4857 aa3.67□□□□□ -1.82
CXCR4-201ENST00000241393 CRIPTQ9P021 101 aa3.67□□□□□ -1.82
CXCR4-201ENST00000241393 R4GN34 69 aa3.65□□□□□ -1.82
CXCR4-201ENST00000241393 KRTAP4-1Q9BYQ7 146 aa3.64□□□□□ -1.83
CXCR4-201ENST00000241393 ABCA13Q86UQ4 5058 aa3.64□□□□□ -1.83
CXCR4-201ENST00000241393 HERC2O95714 4834 aa3.63□□□□□ -1.83
CXCR4-201ENST00000241393 KRTAP19-2Q3LHN2 52 aa3.63□□□□□ -1.83
CXCR4-201ENST00000241393 MUC17Q685J3 4493 aa3.62□□□□□ -1.83
CXCR4-201ENST00000241393 C10orf95Q9H7T3 257 aa3.59□□□□□ -1.84
CXCR4-201ENST00000241393 FLGP20930 4061 aaPredicted RBP3.49□□□□□ -1.85
CXCR4-201ENST00000241393 PCLOQ9Y6V0 5065 aa3.48□□□□□ -1.85
CXCR4-201ENST00000241393 HERC1Q15751 4861 aa3.48□□□□□ -1.85
CXCR4-201ENST00000241393 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
CXCR4-201ENST00000241393 KRTAP5-9P26371 169 aa3.45□□□□□ -1.86
CXCR4-201ENST00000241393 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.87
CXCR4-201ENST00000241393 SPRR5A0A1B0GTR4 108 aa3.39□□□□□ -1.87
CXCR4-201ENST00000241393 SPRR2GQ9BYE4 73 aa3.38□□□□□ -1.87
CXCR4-201ENST00000241393 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
CXCR4-201ENST00000241393 TNP1P09430 55 aa3.36□□□□□ -1.87
CXCR4-201ENST00000241393 PLAC4Q8WY50 150 aa3.36□□□□□ -1.87
CXCR4-201ENST00000241393 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
CXCR4-201ENST00000241393 MUC2Q02817 5179 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms