RNA–Protein interactions for RNA: ENST00000239906.9

FAM53C-201, Transcript of family with sequence similarity 53 member C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM53C, Length 4,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53C-201ENST00000239906 KMT2AQ03164 3969 aa5.49□□□□□ -1.53
FAM53C-201ENST00000239906 DNAH11Q96DT5 4516 aa5.47□□□□□ -1.53
FAM53C-201ENST00000239906 KRTAP10-10P60014 251 aa5.46□□□□□ -1.53
FAM53C-201ENST00000239906 KRTAP4-5Q9BYR2 181 aa5.45□□□□□ -1.54
FAM53C-201ENST00000239906 FRAS1Q86XX4 4008 aa5.45□□□□□ -1.54
FAM53C-201ENST00000239906 HECTD4Q9Y4D8 3996 aa5.44□□□□□ -1.54
FAM53C-201ENST00000239906 DNAH2Q9P225 4427 aa5.43□□□□□ -1.54
FAM53C-201ENST00000239906 KRTAP10-4P60372 401 aaPredicted RBP5.39□□□□□ -1.55
FAM53C-201ENST00000239906 KRTAP12-2P59991 146 aa5.37□□□□□ -1.55
FAM53C-201ENST00000239906 MT1HL1P0DM35 61 aa5.36□□□□□ -1.55
FAM53C-201ENST00000239906 LRP1BQ9NZR2 4599 aa5.36□□□□□ -1.55
FAM53C-201ENST00000239906 KRTAP12-1P59990 96 aa5.35□□□□□ -1.55
FAM53C-201ENST00000239906 HYDINQ4G0P3 5121 aa5.35□□□□□ -1.55
FAM53C-201ENST00000239906 KRTAP10-6P60371 365 aaPredicted RBP5.35□□□□□ -1.55
FAM53C-201ENST00000239906 ALMS1Q8TCU4 4167 aa5.33□□□□□ -1.56
FAM53C-201ENST00000239906 DNAH5Q8TE73 4624 aa5.33□□□□□ -1.56
FAM53C-201ENST00000239906 DNAH6Q9C0G6 4158 aa5.33□□□□□ -1.56
FAM53C-201ENST00000239906 PRO2289Q9P1D8 64 aa5.31□□□□□ -1.56
FAM53C-201ENST00000239906 KRTAP13-4Q3LI77 160 aa5.28□□□□□ -1.56
FAM53C-201ENST00000239906 VPS13BQ7Z7G8 4022 aa5.26□□□□□ -1.57
FAM53C-201ENST00000239906 KIAA1109Q2LD37 5005 aa5.25□□□□□ -1.57
FAM53C-201ENST00000239906 KRTAP3-3Q9BYR6 98 aa5.21□□□□□ -1.57
FAM53C-201ENST00000239906 KRTAP17-1Q9BYP8 105 aa5.21□□□□□ -1.58
FAM53C-201ENST00000239906 KRTAP3-2Q9BYR7 98 aa5.2□□□□□ -1.58
FAM53C-201ENST00000239906 FAT1Q14517 4588 aa5.18□□□□□ -1.58
FAM53C-201ENST00000239906 DYNC1H1Q14204 4646 aaKnown RBP5.18□□□□□ -1.58
FAM53C-201ENST00000239906 KMT2CQ8NEZ4 4911 aaKnown RBP5.17□□□□□ -1.58
FAM53C-201ENST00000239906 RYR3Q15413 4870 aa5.17□□□□□ -1.58
FAM53C-201ENST00000239906 RYR1P21817 5038 aa5.15□□□□□ -1.59
FAM53C-201ENST00000239906 RYR2Q92736 4967 aa5.14□□□□□ -1.59
FAM53C-201ENST00000239906 SACSQ9NZJ4 4579 aa5.14□□□□□ -1.59
FAM53C-201ENST00000239906 FAT2Q9NYQ8 4349 aa5.13□□□□□ -1.59
FAM53C-201ENST00000239906 PKD1P98161 4303 aa5.11□□□□□ -1.59
FAM53C-201ENST00000239906 BIRC6Q9NR09 4857 aa5.09□□□□□ -1.59
FAM53C-201ENST00000239906 PKHD1P08F94 4074 aa5.07□□□□□ -1.6
FAM53C-201ENST00000239906 HERC2O95714 4834 aa5.02□□□□□ -1.61
FAM53C-201ENST00000239906 APOBP04114 4563 aaKnown RBP4.99□□□□□ -1.61
FAM53C-201ENST00000239906 PCLOQ9Y6V0 5065 aa4.99□□□□□ -1.61
FAM53C-201ENST00000239906 EPPK1P58107 5090 aaKnown RBP4.98□□□□□ -1.61
FAM53C-201ENST00000239906 KRTAP15-1Q3LI76 137 aa4.94□□□□□ -1.62
FAM53C-201ENST00000239906 LRP1Q07954 4544 aaKnown RBP4.93□□□□□ -1.62
FAM53C-201ENST00000239906 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
FAM53C-201ENST00000239906 MYCBP2O75592 4640 aa4.91□□□□□ -1.62
FAM53C-201ENST00000239906 FAT3Q8TDW7 4589 aa4.88□□□□□ -1.63
FAM53C-201ENST00000239906 PKHD1L1Q86WI1 4243 aa4.87□□□□□ -1.63
FAM53C-201ENST00000239906 LORP23490 312 aaPredicted RBP4.83□□□□□ -1.64
FAM53C-201ENST00000239906 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
FAM53C-201ENST00000239906 HSPG2P98160 4391 aa4.76□□□□□ -1.65
FAM53C-201ENST00000239906 TNXBP22105 4242 aa4.75□□□□□ -1.65
FAM53C-201ENST00000239906 FSIP2Q5CZC0 6907 aa4.72□□□□□ -1.65
FAM53C-201ENST00000239906 KRTAP4-1Q9BYQ7 146 aa4.71□□□□□ -1.66
FAM53C-201ENST00000239906 ABCA13Q86UQ4 5058 aa4.69□□□□□ -1.66
FAM53C-201ENST00000239906 LRP2P98164 4655 aa4.68□□□□□ -1.66
FAM53C-201ENST00000239906 KRTAP12-3P60328 96 aa4.67□□□□□ -1.66
FAM53C-201ENST00000239906 HERC1Q15751 4861 aa4.64□□□□□ -1.67
FAM53C-201ENST00000239906 UBR4Q5T4S7 5183 aa4.64□□□□□ -1.67
FAM53C-201ENST00000239906 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
FAM53C-201ENST00000239906 SPRR2GQ9BYE4 73 aa4.6□□□□□ -1.67
FAM53C-201ENST00000239906 INE1O15225 51 aa4.6□□□□□ -1.67
FAM53C-201ENST00000239906 MT1HP80294 61 aa4.56□□□□□ -1.68
FAM53C-201ENST00000239906 LPAP08519 4548 aa4.55□□□□□ -1.68
FAM53C-201ENST00000239906 CRCT1Q9UGL9 99 aa4.54□□□□□ -1.68
FAM53C-201ENST00000239906 MT2AP02795 61 aa4.53□□□□□ -1.68
FAM53C-201ENST00000239906 RNF213Q63HN8 5207 aa4.51□□□□□ -1.69
FAM53C-201ENST00000239906 MT1FP04733 61 aa4.43□□□□□ -1.7
FAM53C-201ENST00000239906 KRTAP8-1Q8IUC2 63 aa4.37□□□□□ -1.71
FAM53C-201ENST00000239906 KRTAP9-2Q9BYQ4 174 aa4.36□□□□□ -1.71
FAM53C-201ENST00000239906 KRTAP19-2Q3LHN2 52 aa4.35□□□□□ -1.71
FAM53C-201ENST00000239906 KRTAP19-8Q3LI54 63 aa4.35□□□□□ -1.71
FAM53C-201ENST00000239906 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
FAM53C-201ENST00000239906 KRTAP19-1Q8IUB9 90 aa4.33□□□□□ -1.72
FAM53C-201ENST00000239906 HMCN2Q8NDA2 5059 aa4.3□□□□□ -1.72
FAM53C-201ENST00000239906 MUC17Q685J3 4493 aa4.29□□□□□ -1.72
FAM53C-201ENST00000239906 KRTAP9-6A0A140TA67 174 aa4.24□□□□□ -1.73
FAM53C-201ENST00000239906 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
FAM53C-201ENST00000239906 KRTAP10-5P60370 271 aa4.22□□□□□ -1.73
FAM53C-201ENST00000239906 LCE2CQ5TA81 110 aa4.19□□□□□ -1.74
FAM53C-201ENST00000239906 KRTAP19-5Q3LI72 72 aa4.19□□□□□ -1.74
FAM53C-201ENST00000239906 KRTAP9-8Q9BYQ0 159 aa4.18□□□□□ -1.74
FAM53C-201ENST00000239906 MUC2Q02817 5179 aa4.17□□□□□ -1.74
FAM53C-201ENST00000239906 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.75
FAM53C-201ENST00000239906 MT1BP07438 61 aa4.14□□□□□ -1.75
FAM53C-201ENST00000239906 MT1XP80297 61 aa4.13□□□□□ -1.75
FAM53C-201ENST00000239906 FAT4Q6V0I7 4981 aa4.13□□□□□ -1.75
FAM53C-201ENST00000239906 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
FAM53C-201ENST00000239906 SPRR2FQ96RM1 72 aa4.08□□□□□ -1.76
FAM53C-201ENST00000239906 KRTAP9-3Q9BYQ3 159 aa4.07□□□□□ -1.76
FAM53C-201ENST00000239906 SPRR5A0A1B0GTR4 108 aa4.06□□□□□ -1.76
FAM53C-201ENST00000239906 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.78
FAM53C-201ENST00000239906 LCE2AQ5TA79 106 aaPredicted RBP3.95□□□□□ -1.78
FAM53C-201ENST00000239906 SYNE2Q8WXH0 6885 aaKnown RBP3.92□□□□□ -1.78
FAM53C-201ENST00000239906 KRTAP4-8A0A0G2JLE6 195 aa3.92□□□□□ -1.78
FAM53C-201ENST00000239906 KRTAP4-8Q9BYQ9 185 aa3.92□□□□□ -1.78
FAM53C-201ENST00000239906 KRTAP9-7A8MTY7 169 aa3.92□□□□□ -1.78
FAM53C-201ENST00000239906 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
FAM53C-201ENST00000239906 MT1GP13640 62 aa3.85□□□□□ -1.79
FAM53C-201ENST00000239906 LCE2BO14633 110 aa3.84□□□□□ -1.8
FAM53C-201ENST00000239906 LCE2DQ5TA82 110 aaPredicted RBP3.81□□□□□ -1.8
FAM53C-201ENST00000239906 KMT2DO14686 5537 aa3.79□□□□□ -1.8
FAM53C-201ENST00000239906 SPRR2EP22531 72 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms