RNA–Protein interactions for RNA: ENST00000233330.6

RTKN-201, Transcript of rhotekin, humanhuman

TSL 1 (best) BASIC

Gene RTKN, Length 2,220 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-201ENST00000233330 MIR22HGQ0VDD5 57 aa10.15□□□□□ -0.78
RTKN-201ENST00000233330 A6NN06 94 aa10.14□□□□□ -0.79
RTKN-201ENST00000233330 TPRXLQ17RH7 258 aa10.14□□□□□ -0.79
RTKN-201ENST00000233330 ABCA13Q86UQ4 5058 aa10.12□□□□□ -0.79
RTKN-201ENST00000233330 LRP2P98164 4655 aa10.1□□□□□ -0.79
RTKN-201ENST00000233330 LPAP08519 4548 aa10.07□□□□□ -0.8
RTKN-201ENST00000233330 KRTAP3-3Q9BYR6 98 aa10.02□□□□□ -0.81
RTKN-201ENST00000233330 KTN1-AS1Q86SY8 53 aa9.98□□□□□ -0.81
RTKN-201ENST00000233330 A0A1B0GU33 70 aa9.97□□□□□ -0.81
RTKN-201ENST00000233330 S4R3F8 94 aa9.96□□□□□ -0.82
RTKN-201ENST00000233330 H1FX-AS1Q4G0G2 97 aa9.95□□□□□ -0.82
RTKN-201ENST00000233330 H0YAA0 97 aa9.95□□□□□ -0.82
RTKN-201ENST00000233330 HERC2O95714 4834 aa9.91□□□□□ -0.82
RTKN-201ENST00000233330 J3QL48 77 aa9.83□□□□□ -0.84
RTKN-201ENST00000233330 KRTAP10-6P60371 365 aaPredicted RBP9.82□□□□□ -0.84
RTKN-201ENST00000233330 RBM12B-AS1Q9P1G2 102 aa9.82□□□□□ -0.84
RTKN-201ENST00000233330 BIRC6Q9NR09 4857 aa9.82□□□□□ -0.84
RTKN-201ENST00000233330 KRTAP3-2Q9BYR7 98 aa9.78□□□□□ -0.84
RTKN-201ENST00000233330 SEC61BP60468 96 aaKnown RBP9.75□□□□□ -0.85
RTKN-201ENST00000233330 MUC17Q685J3 4493 aa9.75□□□□□ -0.85
RTKN-201ENST00000233330 P0C880 135 aa9.66□□□□□ -0.86
RTKN-201ENST00000233330 ADM2Q7Z4H4 148 aa9.66□□□□□ -0.86
RTKN-201ENST00000233330 KRTAP13-4Q3LI77 160 aa9.65□□□□□ -0.86
RTKN-201ENST00000233330 CSAG1Q6PB30 78 aa9.65□□□□□ -0.86
RTKN-201ENST00000233330 PRAC1Q96KF2 57 aa9.64□□□□□ -0.87
RTKN-201ENST00000233330 KRTAP4-1Q9BYQ7 146 aa9.6□□□□□ -0.87
RTKN-201ENST00000233330 K7ERS5 55 aa9.54□□□□□ -0.88
RTKN-201ENST00000233330 A0A0D9SG42 100 aa9.5□□□□□ -0.89
RTKN-201ENST00000233330 PCLOQ9Y6V0 5065 aa9.47□□□□□ -0.89
RTKN-201ENST00000233330 KRTAP19-2Q3LHN2 52 aa9.43□□□□□ -0.9
RTKN-201ENST00000233330 HERC1Q15751 4861 aa9.43□□□□□ -0.9
RTKN-201ENST00000233330 HMCN2Q8NDA2 5059 aa9.38□□□□□ -0.91
RTKN-201ENST00000233330 M0QZ58 72 aa9.37□□□□□ -0.91
RTKN-201ENST00000233330 MUC2Q02817 5179 aa9.35□□□□□ -0.91
RTKN-201ENST00000233330 KRTAP12-2P59991 146 aa9.31□□□□□ -0.92
RTKN-201ENST00000233330 KRTAP12-1P59990 96 aa9.28□□□□□ -0.92
RTKN-201ENST00000233330 ROMO1P60602 79 aa9.28□□□□□ -0.92
RTKN-201ENST00000233330 FLGP20930 4061 aaPredicted RBP9.25□□□□□ -0.93
RTKN-201ENST00000233330 SPINT4Q6UDR6 99 aa9.23□□□□□ -0.93
RTKN-201ENST00000233330 R4GN34 69 aa9.21□□□□□ -0.93
RTKN-201ENST00000233330 KRTAP25-1Q3LHN0 102 aa9.2□□□□□ -0.94
RTKN-201ENST00000233330 LINC01554Q52M75 96 aa9.18□□□□□ -0.94
RTKN-201ENST00000233330 LORP23490 312 aaPredicted RBP9.17□□□□□ -0.94
RTKN-201ENST00000233330 CRIPTQ9P021 101 aa9.13□□□□□ -0.95
RTKN-201ENST00000233330 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
RTKN-201ENST00000233330 FAT4Q6V0I7 4981 aa8.94□□□□□ -0.98
RTKN-201ENST00000233330 RNF213Q63HN8 5207 aa8.93□□□□□ -0.98
RTKN-201ENST00000233330 UBR4Q5T4S7 5183 aa8.9□□□□□ -0.98
RTKN-201ENST00000233330 C10orf95Q9H7T3 257 aa8.9□□□□□ -0.98
RTKN-201ENST00000233330 MT1HP80294 61 aa8.76□□□□□ -1.01
RTKN-201ENST00000233330 M0R2T5 61 aa8.71□□□□□ -1.02
RTKN-201ENST00000233330 CAMK2N1Q7Z7J9 78 aa8.69□□□□□ -1.02
RTKN-201ENST00000233330 SPRR2GQ9BYE4 73 aa8.61□□□□□ -1.03
RTKN-201ENST00000233330 KRTAP19-1Q8IUB9 90 aa8.57□□□□□ -1.04
RTKN-201ENST00000233330 MT2AP02795 61 aa8.53□□□□□ -1.04
RTKN-201ENST00000233330 MT1FP04733 61 aa8.52□□□□□ -1.05
RTKN-201ENST00000233330 KRTAP9-8Q9BYQ0 159 aa8.52□□□□□ -1.05
RTKN-201ENST00000233330 KRTAP10-10P60014 251 aa8.48□□□□□ -1.05
RTKN-201ENST00000233330 PLAC4Q8WY50 150 aa8.42□□□□□ -1.06
RTKN-201ENST00000233330 PP632Q6XCG6 107 aa8.36□□□□□ -1.07
RTKN-201ENST00000233330 TNP1P09430 55 aa8.34□□□□□ -1.07
RTKN-201ENST00000233330 KRTAP15-1Q3LI76 137 aa8.31□□□□□ -1.08
RTKN-201ENST00000233330 H3BS24 57 aa8.29□□□□□ -1.08
RTKN-201ENST00000233330 KRTAP19-8Q3LI54 63 aa8.29□□□□□ -1.08
RTKN-201ENST00000233330 KRTAP23-1A1A580 65 aa8.21□□□□□ -1.1
RTKN-201ENST00000233330 MT1BP07438 61 aa8.18□□□□□ -1.1
RTKN-201ENST00000233330 KRTAP9-3Q9BYQ3 159 aa8.18□□□□□ -1.1
RTKN-201ENST00000233330 KRTAP10-5P60370 271 aa8.04□□□□□ -1.12
RTKN-201ENST00000233330 MT1XP80297 61 aa8.03□□□□□ -1.12
RTKN-201ENST00000233330 LCE2AQ5TA79 106 aaPredicted RBP8.02□□□□□ -1.13
RTKN-201ENST00000233330 NDUFAF8A1L188 74 aa7.98□□□□□ -1.13
RTKN-201ENST00000233330 LCE3AQ5TA76 89 aa7.94□□□□□ -1.14
RTKN-201ENST00000233330 LCE2BO14633 110 aa7.88□□□□□ -1.15
RTKN-201ENST00000233330 PRO2289Q9P1D8 64 aa7.8□□□□□ -1.16
RTKN-201ENST00000233330 KRTAP8-1Q8IUC2 63 aa7.78□□□□□ -1.16
RTKN-201ENST00000233330 KRTAP10-12P60413 245 aa7.77□□□□□ -1.17
RTKN-201ENST00000233330 KRTAP10-7P60409 375 aaPredicted RBP7.76□□□□□ -1.17
RTKN-201ENST00000233330 USH2AO75445 5202 aa7.72□□□□□ -1.17
RTKN-201ENST00000233330 SPRR5A0A1B0GTR4 108 aa7.68□□□□□ -1.18
RTKN-201ENST00000233330 LUZP6Q538Z0 58 aa7.64□□□□□ -1.19
RTKN-201ENST00000233330 KRTAP12-3P60328 96 aa7.59□□□□□ -1.19
RTKN-201ENST00000233330 KMT2DO14686 5537 aa7.42□□□□□ -1.22
RTKN-201ENST00000233330 SSPOA2VEC9 5147 aa7.39□□□□□ -1.23
RTKN-201ENST00000233330 KRTAP19-5Q3LI72 72 aa7.38□□□□□ -1.23
RTKN-201ENST00000233330 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
RTKN-201ENST00000233330 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
RTKN-201ENST00000233330 KRTAP19-6Q3LI70 58 aa7.22□□□□□ -1.25
RTKN-201ENST00000233330 KRTAP19-7Q3SYF9 63 aa7.17□□□□□ -1.26
RTKN-201ENST00000233330 FSIP2Q5CZC0 6907 aa7.14□□□□□ -1.27
RTKN-201ENST00000233330 LCE3CQ5T5A8 94 aa7.13□□□□□ -1.27
RTKN-201ENST00000233330 A0A0A0MQY5 61 aa7.09□□□□□ -1.27
RTKN-201ENST00000233330 LCE2DQ5TA82 110 aaPredicted RBP7.03□□□□□ -1.28
RTKN-201ENST00000233330 MT1EP04732 61 aa6.99□□□□□ -1.29
RTKN-201ENST00000233330 MT1LQ93083 61 aa6.93□□□□□ -1.3
RTKN-201ENST00000233330 KRTAP19-4Q3LI73 84 aa6.91□□□□□ -1.3
RTKN-201ENST00000233330 FCGBPQ9Y6R7 5405 aaPredicted RBP6.89□□□□□ -1.31
RTKN-201ENST00000233330 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
RTKN-201ENST00000233330 KRTAP9-6A8MVA2 160 aa6.83□□□□□ -1.32
RTKN-201ENST00000233330 MUC12Q9UKN1 5478 aa6.67□□□□□ -1.34
RTKN-201ENST00000233330 KRTAP19-3Q7Z4W3 81 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms