RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 C10orf95Q9H7T3 257 aa8.58□□□□□ -1.04
PTK7-202ENST00000230419 HYDINQ4G0P3 5121 aa8.57□□□□□ -1.04
PTK7-202ENST00000230419 H3BS24 57 aa8.56□□□□□ -1.04
PTK7-202ENST00000230419 KIAA1109Q2LD37 5005 aa8.5□□□□□ -1.05
PTK7-202ENST00000230419 VPS13BQ7Z7G8 4022 aa8.5□□□□□ -1.05
PTK7-202ENST00000230419 KRTAP10-4P60372 401 aaPredicted RBP8.46□□□□□ -1.05
PTK7-202ENST00000230419 KRTAP4-5Q9BYR2 181 aa8.45□□□□□ -1.06
PTK7-202ENST00000230419 FAT3Q8TDW7 4589 aa8.45□□□□□ -1.06
PTK7-202ENST00000230419 HECTD4Q9Y4D8 3996 aa8.45□□□□□ -1.06
PTK7-202ENST00000230419 DYNC2H1Q8NCM8 4307 aaKnown RBP8.45□□□□□ -1.06
PTK7-202ENST00000230419 PKHD1P08F94 4074 aa8.44□□□□□ -1.06
PTK7-202ENST00000230419 RYR1P21817 5038 aa8.43□□□□□ -1.06
PTK7-202ENST00000230419 LRP1Q07954 4544 aaKnown RBP8.43□□□□□ -1.06
PTK7-202ENST00000230419 TPRXLQ17RH7 258 aa8.41□□□□□ -1.06
PTK7-202ENST00000230419 LUZP6Q538Z0 58 aa8.38□□□□□ -1.07
PTK7-202ENST00000230419 SACSQ9NZJ4 4579 aa8.35□□□□□ -1.07
PTK7-202ENST00000230419 MT1HL1P0DM35 61 aa8.32□□□□□ -1.08
PTK7-202ENST00000230419 APOBP04114 4563 aaKnown RBP8.3□□□□□ -1.08
PTK7-202ENST00000230419 RYR3Q15413 4870 aa8.28□□□□□ -1.08
PTK7-202ENST00000230419 KRTAP13-4Q3LI77 160 aa8.26□□□□□ -1.09
PTK7-202ENST00000230419 KMT2CQ8NEZ4 4911 aaKnown RBP8.26□□□□□ -1.09
PTK7-202ENST00000230419 NDUFAF8A1L188 74 aa8.24□□□□□ -1.09
PTK7-202ENST00000230419 KRTAP12-2P59991 146 aa8.23□□□□□ -1.09
PTK7-202ENST00000230419 ALMS1Q8TCU4 4167 aa8.22□□□□□ -1.09
PTK7-202ENST00000230419 PLAC4Q8WY50 150 aa8.22□□□□□ -1.09
PTK7-202ENST00000230419 KRTAP10-6P60371 365 aaPredicted RBP8.19□□□□□ -1.1
PTK7-202ENST00000230419 FAT2Q9NYQ8 4349 aa8.15□□□□□ -1.1
PTK7-202ENST00000230419 KRTAP17-1Q9BYP8 105 aa8.11□□□□□ -1.11
PTK7-202ENST00000230419 KRTAP3-3Q9BYR6 98 aa8.11□□□□□ -1.11
PTK7-202ENST00000230419 KRTAP12-1P59990 96 aa8.07□□□□□ -1.12
PTK7-202ENST00000230419 RYR2Q92736 4967 aa8.01□□□□□ -1.13
PTK7-202ENST00000230419 LRP2P98164 4655 aa8□□□□□ -1.13
PTK7-202ENST00000230419 TNP1P09430 55 aa8□□□□□ -1.13
PTK7-202ENST00000230419 KRTAP3-2Q9BYR7 98 aa8□□□□□ -1.13
PTK7-202ENST00000230419 KRTAP10-10P60014 251 aa7.94□□□□□ -1.14
PTK7-202ENST00000230419 PKD1P98161 4303 aa7.94□□□□□ -1.14
PTK7-202ENST00000230419 LORP23490 312 aaPredicted RBP7.83□□□□□ -1.16
PTK7-202ENST00000230419 A0A0A0MQY5 61 aa7.81□□□□□ -1.16
PTK7-202ENST00000230419 LPAP08519 4548 aa7.77□□□□□ -1.17
PTK7-202ENST00000230419 HERC2O95714 4834 aa7.77□□□□□ -1.17
PTK7-202ENST00000230419 KRTAP4-1Q9BYQ7 146 aa7.76□□□□□ -1.17
PTK7-202ENST00000230419 EPPK1P58107 5090 aaKnown RBP7.76□□□□□ -1.17
PTK7-202ENST00000230419 HSPG2P98160 4391 aa7.75□□□□□ -1.17
PTK7-202ENST00000230419 PP632Q6XCG6 107 aa7.69□□□□□ -1.18
PTK7-202ENST00000230419 MUC2Q02817 5179 aa7.52□□□□□ -1.21
PTK7-202ENST00000230419 PKHD1L1Q86WI1 4243 aa7.52□□□□□ -1.21
PTK7-202ENST00000230419 ABCA13Q86UQ4 5058 aa7.51□□□□□ -1.21
PTK7-202ENST00000230419 PCLOQ9Y6V0 5065 aa7.39□□□□□ -1.23
PTK7-202ENST00000230419 RNF213Q63HN8 5207 aa7.37□□□□□ -1.23
PTK7-202ENST00000230419 TNXBP22105 4242 aa7.37□□□□□ -1.23
PTK7-202ENST00000230419 HERC1Q15751 4861 aa7.34□□□□□ -1.23
PTK7-202ENST00000230419 KRTAP15-1Q3LI76 137 aa7.32□□□□□ -1.24
PTK7-202ENST00000230419 PRO2289Q9P1D8 64 aa7.28□□□□□ -1.24
PTK7-202ENST00000230419 FAT4Q6V0I7 4981 aa7.23□□□□□ -1.25
PTK7-202ENST00000230419 BIRC6Q9NR09 4857 aa7.18□□□□□ -1.26
PTK7-202ENST00000230419 UBR4Q5T4S7 5183 aa7.13□□□□□ -1.27
PTK7-202ENST00000230419 MT1HP80294 61 aa7.06□□□□□ -1.28
PTK7-202ENST00000230419 FSIP2Q5CZC0 6907 aa7.06□□□□□ -1.28
PTK7-202ENST00000230419 LCE3AQ5TA76 89 aa7.05□□□□□ -1.28
PTK7-202ENST00000230419 KRTAP10-12P60413 245 aa6.99□□□□□ -1.29
PTK7-202ENST00000230419 MT1FP04733 61 aa6.98□□□□□ -1.29
PTK7-202ENST00000230419 MT2AP02795 61 aa6.97□□□□□ -1.29
PTK7-202ENST00000230419 KRTAP12-3P60328 96 aa6.87□□□□□ -1.31
PTK7-202ENST00000230419 MUC17Q685J3 4493 aa6.83□□□□□ -1.32
PTK7-202ENST00000230419 KRTAP19-1Q8IUB9 90 aa6.81□□□□□ -1.32
PTK7-202ENST00000230419 LCE2CQ5TA81 110 aa6.79□□□□□ -1.32
PTK7-202ENST00000230419 SPRR2GQ9BYE4 73 aa6.79□□□□□ -1.32
PTK7-202ENST00000230419 HMCN2Q8NDA2 5059 aa6.78□□□□□ -1.32
PTK7-202ENST00000230419 KRTAP19-2Q3LHN2 52 aa6.77□□□□□ -1.33
PTK7-202ENST00000230419 FLGP20930 4061 aaPredicted RBP6.72□□□□□ -1.33
PTK7-202ENST00000230419 CRCT1Q9UGL9 99 aa6.68□□□□□ -1.34
PTK7-202ENST00000230419 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
PTK7-202ENST00000230419 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
PTK7-202ENST00000230419 KRTAP10-7P60409 375 aaPredicted RBP6.54□□□□□ -1.36
PTK7-202ENST00000230419 USH2AO75445 5202 aa6.54□□□□□ -1.36
PTK7-202ENST00000230419 MT1BP07438 61 aa6.48□□□□□ -1.37
PTK7-202ENST00000230419 MT1XP80297 61 aa6.44□□□□□ -1.38
PTK7-202ENST00000230419 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.38
PTK7-202ENST00000230419 KRTAP10-5P60370 271 aa6.4□□□□□ -1.38
PTK7-202ENST00000230419 KRTAP19-5Q3LI72 72 aa6.4□□□□□ -1.38
PTK7-202ENST00000230419 KRTAP4-8Q9BYQ9 185 aa6.4□□□□□ -1.38
PTK7-202ENST00000230419 KRTAP8-1Q8IUC2 63 aa6.38□□□□□ -1.39
PTK7-202ENST00000230419 OBSCNQ5VST9 7968 aa6.37□□□□□ -1.39
PTK7-202ENST00000230419 KRTAP19-8Q3LI54 63 aa6.36□□□□□ -1.39
PTK7-202ENST00000230419 KRTAP9-3Q9BYQ3 159 aa6.33□□□□□ -1.4
PTK7-202ENST00000230419 KMT2DO14686 5537 aa6.31□□□□□ -1.4
PTK7-202ENST00000230419 LCE2BO14633 110 aa6.27□□□□□ -1.41
PTK7-202ENST00000230419 SYNE1Q8NF91 8797 aaKnown RBP6.19□□□□□ -1.42
PTK7-202ENST00000230419 INE1O15225 51 aa6.19□□□□□ -1.42
PTK7-202ENST00000230419 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
PTK7-202ENST00000230419 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
PTK7-202ENST00000230419 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
PTK7-202ENST00000230419 FCGBPQ9Y6R7 5405 aaPredicted RBP6.04□□□□□ -1.44
PTK7-202ENST00000230419 SPRR2FQ96RM1 72 aa6□□□□□ -1.45
PTK7-202ENST00000230419 SPRR5A0A1B0GTR4 108 aa6□□□□□ -1.45
PTK7-202ENST00000230419 LCE2AQ5TA79 106 aaPredicted RBP5.85□□□□□ -1.47
PTK7-202ENST00000230419 MT1GP13640 62 aa5.82□□□□□ -1.48
PTK7-202ENST00000230419 MUC12Q9UKN1 5478 aa5.77□□□□□ -1.49
PTK7-202ENST00000230419 KRTAP4-3Q9BYR4 195 aa5.75□□□□□ -1.49
PTK7-202ENST00000230419 SYNE2Q8WXH0 6885 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms