RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 DYNC1H1Q14204 4646 aaKnown RBP4.09□□□□□ -1.75
NANOG-201ENST00000229307 RYR3Q15413 4870 aa4.09□□□□□ -1.75
NANOG-201ENST00000229307 CSMD3Q7Z407 3707 aa4.09□□□□□ -1.75
NANOG-201ENST00000229307 PRO2289Q9P1D8 64 aa4.08□□□□□ -1.76
NANOG-201ENST00000229307 KRTAP10-4P60372 401 aaPredicted RBP4.08□□□□□ -1.76
NANOG-201ENST00000229307 TNP1P09430 55 aa4.08□□□□□ -1.76
NANOG-201ENST00000229307 MT1HL1P0DM35 61 aa4.07□□□□□ -1.76
NANOG-201ENST00000229307 DNAH5Q8TE73 4624 aa4.06□□□□□ -1.76
NANOG-201ENST00000229307 HERC2O95714 4834 aa4.05□□□□□ -1.76
NANOG-201ENST00000229307 RYR1P21817 5038 aa4.03□□□□□ -1.76
NANOG-201ENST00000229307 KIAA1109Q2LD37 5005 aa4.02□□□□□ -1.77
NANOG-201ENST00000229307 EPPK1P58107 5090 aaKnown RBP4.01□□□□□ -1.77
NANOG-201ENST00000229307 LRP1BQ9NZR2 4599 aa4□□□□□ -1.77
NANOG-201ENST00000229307 FAT2Q9NYQ8 4349 aa4□□□□□ -1.77
NANOG-201ENST00000229307 P0C880 135 aa4□□□□□ -1.77
NANOG-201ENST00000229307 HYDINQ4G0P3 5121 aa3.99□□□□□ -1.77
NANOG-201ENST00000229307 KMT2AQ03164 3969 aa3.98□□□□□ -1.77
NANOG-201ENST00000229307 DNAH2Q9P225 4427 aa3.97□□□□□ -1.77
NANOG-201ENST00000229307 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
NANOG-201ENST00000229307 H0YAA0 97 aa3.92□□□□□ -1.78
NANOG-201ENST00000229307 LYSTQ99698 3801 aa3.91□□□□□ -1.78
NANOG-201ENST00000229307 PCLOQ9Y6V0 5065 aa3.9□□□□□ -1.79
NANOG-201ENST00000229307 APOBP04114 4563 aaKnown RBP3.89□□□□□ -1.79
NANOG-201ENST00000229307 HECTD4Q9Y4D8 3996 aa3.89□□□□□ -1.79
NANOG-201ENST00000229307 SRRM2Q9UQ35 2752 aaKnown RBP3.89□□□□□ -1.79
NANOG-201ENST00000229307 HSPG2P98160 4391 aa3.88□□□□□ -1.79
NANOG-201ENST00000229307 DNAH8Q96JB1 4490 aa3.84□□□□□ -1.79
NANOG-201ENST00000229307 FAT1Q14517 4588 aa3.83□□□□□ -1.8
NANOG-201ENST00000229307 KRTAP3-3Q9BYR6 98 aa3.83□□□□□ -1.8
NANOG-201ENST00000229307 KRTAP3-2Q9BYR7 98 aa3.83□□□□□ -1.8
NANOG-201ENST00000229307 C10orf95Q9H7T3 257 aa3.82□□□□□ -1.8
NANOG-201ENST00000229307 PKD1P98161 4303 aa3.81□□□□□ -1.8
NANOG-201ENST00000229307 FRAS1Q86XX4 4008 aa3.8□□□□□ -1.8
NANOG-201ENST00000229307 ABCA13Q86UQ4 5058 aa3.8□□□□□ -1.8
NANOG-201ENST00000229307 KRTAP3-1Q9BYR8 98 aa3.77□□□□□ -1.81
NANOG-201ENST00000229307 PKHD1P08F94 4074 aa3.77□□□□□ -1.81
NANOG-201ENST00000229307 VPS13BQ7Z7G8 4022 aa3.77□□□□□ -1.81
NANOG-201ENST00000229307 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
NANOG-201ENST00000229307 MYCBP2O75592 4640 aa3.74□□□□□ -1.81
NANOG-201ENST00000229307 PKHD1L1Q86WI1 4243 aa3.7□□□□□ -1.82
NANOG-201ENST00000229307 KRTAP23-1A1A580 65 aa3.69□□□□□ -1.82
NANOG-201ENST00000229307 HERC1Q15751 4861 aa3.69□□□□□ -1.82
NANOG-201ENST00000229307 KRTAP13-4Q3LI77 160 aa3.67□□□□□ -1.82
NANOG-201ENST00000229307 KRTAP12-2P59991 146 aa3.66□□□□□ -1.82
NANOG-201ENST00000229307 FAT3Q8TDW7 4589 aa3.65□□□□□ -1.83
NANOG-201ENST00000229307 KRTAP12-1P59990 96 aa3.64□□□□□ -1.83
NANOG-201ENST00000229307 KRTAP10-6P60371 365 aaPredicted RBP3.61□□□□□ -1.83
NANOG-201ENST00000229307 LRP1Q07954 4544 aaKnown RBP3.59□□□□□ -1.83
NANOG-201ENST00000229307 HMCN2Q8NDA2 5059 aa3.54□□□□□ -1.84
NANOG-201ENST00000229307 MT1HP80294 61 aa3.52□□□□□ -1.85
NANOG-201ENST00000229307 KRTAP9-2Q9BYQ4 174 aa3.51□□□□□ -1.85
NANOG-201ENST00000229307 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
NANOG-201ENST00000229307 KRTAP4-1Q9BYQ7 146 aa3.49□□□□□ -1.85
NANOG-201ENST00000229307 TNXBP22105 4242 aa3.48□□□□□ -1.85
NANOG-201ENST00000229307 KRTAP9-6A0A140TA67 174 aa3.46□□□□□ -1.86
NANOG-201ENST00000229307 LRP2P98164 4655 aa3.46□□□□□ -1.86
NANOG-201ENST00000229307 RNF213Q63HN8 5207 aa3.44□□□□□ -1.86
NANOG-201ENST00000229307 LCE2DQ5TA82 110 aaPredicted RBP3.44□□□□□ -1.86
NANOG-201ENST00000229307 LCE2AQ5TA79 106 aaPredicted RBP3.44□□□□□ -1.86
NANOG-201ENST00000229307 CRCT1Q9UGL9 99 aa3.42□□□□□ -1.86
NANOG-201ENST00000229307 MT2AP02795 61 aa3.41□□□□□ -1.86
NANOG-201ENST00000229307 MUC17Q685J3 4493 aa3.39□□□□□ -1.87
NANOG-201ENST00000229307 KRTAP8-1Q8IUC2 63 aa3.38□□□□□ -1.87
NANOG-201ENST00000229307 UBR4Q5T4S7 5183 aa3.37□□□□□ -1.87
NANOG-201ENST00000229307 LORP23490 312 aaPredicted RBP3.35□□□□□ -1.87
NANOG-201ENST00000229307 SPRR2GQ9BYE4 73 aa3.34□□□□□ -1.87
NANOG-201ENST00000229307 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
NANOG-201ENST00000229307 LCE2CQ5TA81 110 aa3.33□□□□□ -1.88
NANOG-201ENST00000229307 MT1FP04733 61 aa3.32□□□□□ -1.88
NANOG-201ENST00000229307 LPAP08519 4548 aa3.3□□□□□ -1.88
NANOG-201ENST00000229307 FAT4Q6V0I7 4981 aa3.28□□□□□ -1.88
NANOG-201ENST00000229307 LCE3AQ5TA76 89 aa3.27□□□□□ -1.89
NANOG-201ENST00000229307 INE1O15225 51 aa3.26□□□□□ -1.89
NANOG-201ENST00000229307 KRTAP19-2Q3LHN2 52 aa3.25□□□□□ -1.89
NANOG-201ENST00000229307 KRTAP9-8Q9BYQ0 159 aa3.2□□□□□ -1.9
NANOG-201ENST00000229307 KRTAP19-8Q3LI54 63 aa3.17□□□□□ -1.9
NANOG-201ENST00000229307 SPRR2FQ96RM1 72 aa3.17□□□□□ -1.9
NANOG-201ENST00000229307 KRTAP19-1Q8IUB9 90 aa3.15□□□□□ -1.91
NANOG-201ENST00000229307 KRTAP19-4Q3LI73 84 aa3.13□□□□□ -1.91
NANOG-201ENST00000229307 KRTAP9-3Q9BYQ3 159 aa3.13□□□□□ -1.91
NANOG-201ENST00000229307 KRTAP9-7A8MTY7 169 aa3.12□□□□□ -1.91
NANOG-201ENST00000229307 KRTAP10-5P60370 271 aa3.11□□□□□ -1.91
NANOG-201ENST00000229307 FLGP20930 4061 aaPredicted RBP3.09□□□□□ -1.91
NANOG-201ENST00000229307 KRTAP10-7P60409 375 aaPredicted RBP3.08□□□□□ -1.92
NANOG-201ENST00000229307 LCE2BO14633 110 aa3.08□□□□□ -1.92
NANOG-201ENST00000229307 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.08□□□□□ -1.92
NANOG-201ENST00000229307 KRTAP19-6Q3LI70 58 aa3.07□□□□□ -1.92
NANOG-201ENST00000229307 SPRR2EP22531 72 aa3.05□□□□□ -1.92
NANOG-201ENST00000229307 SPRR2BP35325 72 aa3.05□□□□□ -1.92
NANOG-201ENST00000229307 SPRR2AP35326 72 aa3.05□□□□□ -1.92
NANOG-201ENST00000229307 KRTAP19-5Q3LI72 72 aa3.04□□□□□ -1.92
NANOG-201ENST00000229307 MT1BP07438 61 aa3.02□□□□□ -1.93
NANOG-201ENST00000229307 MUC2Q02817 5179 aa3□□□□□ -1.93
NANOG-201ENST00000229307 MT1XP80297 61 aa2.99□□□□□ -1.93
NANOG-201ENST00000229307 KRTAP6-3Q3LI67 103 aa2.99□□□□□ -1.93
NANOG-201ENST00000229307 FSIP2Q5CZC0 6907 aa2.97□□□□□ -1.93
NANOG-201ENST00000229307 SPRR2DP22532 72 aa2.97□□□□□ -1.93
NANOG-201ENST00000229307 LCE3CQ5T5A8 94 aa2.94□□□□□ -1.94
NANOG-201ENST00000229307 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.95
NANOG-201ENST00000229307 MT1GP13640 62 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms