RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 MYCBP2O75592 4640 aa8.27□□□□□ -1.09
PXN-201ENST00000228307 C10orf95Q9H7T3 257 aa8.27□□□□□ -1.09
PXN-201ENST00000228307 LRP1Q07954 4544 aaKnown RBP8.24□□□□□ -1.09
PXN-201ENST00000228307 FAT2Q9NYQ8 4349 aa8.21□□□□□ -1.09
PXN-201ENST00000228307 ALMS1Q8TCU4 4167 aa8.2□□□□□ -1.1
PXN-201ENST00000228307 APOBP04114 4563 aaKnown RBP8.2□□□□□ -1.1
PXN-201ENST00000228307 FAT3Q8TDW7 4589 aa8.16□□□□□ -1.1
PXN-201ENST00000228307 NDUFAF8A1L188 74 aa8.16□□□□□ -1.1
PXN-201ENST00000228307 RYR3Q15413 4870 aa8.16□□□□□ -1.1
PXN-201ENST00000228307 KRTAP10-4P60372 401 aaPredicted RBP8.15□□□□□ -1.1
PXN-201ENST00000228307 PKD1P98161 4303 aa8.12□□□□□ -1.11
PXN-201ENST00000228307 P0C880 135 aa8.12□□□□□ -1.11
PXN-201ENST00000228307 RYR1P21817 5038 aa8.11□□□□□ -1.11
PXN-201ENST00000228307 RYR2Q92736 4967 aa8.11□□□□□ -1.11
PXN-201ENST00000228307 KRTAP4-5Q9BYR2 181 aa8.1□□□□□ -1.11
PXN-201ENST00000228307 KRTAP10-8P60410 259 aa8.07□□□□□ -1.12
PXN-201ENST00000228307 R4GN34 69 aa8.06□□□□□ -1.12
PXN-201ENST00000228307 M0QZ58 72 aa8.05□□□□□ -1.12
PXN-201ENST00000228307 XP32Q5T750 250 aa8.05□□□□□ -1.12
PXN-201ENST00000228307 KRTAP13-4Q3LI77 160 aa8.02□□□□□ -1.13
PXN-201ENST00000228307 KRTAP17-1Q9BYP8 105 aa8.02□□□□□ -1.13
PXN-201ENST00000228307 TPRXLQ17RH7 258 aa7.99□□□□□ -1.13
PXN-201ENST00000228307 KRTAP10-6P60371 365 aaPredicted RBP7.96□□□□□ -1.14
PXN-201ENST00000228307 CAMK2N1Q7Z7J9 78 aa7.92□□□□□ -1.14
PXN-201ENST00000228307 KRTAP12-2P59991 146 aa7.91□□□□□ -1.14
PXN-201ENST00000228307 MT1HL1P0DM35 61 aa7.9□□□□□ -1.14
PXN-201ENST00000228307 EPPK1P58107 5090 aaKnown RBP7.89□□□□□ -1.15
PXN-201ENST00000228307 LUZP6Q538Z0 58 aa7.85□□□□□ -1.15
PXN-201ENST00000228307 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
PXN-201ENST00000228307 HSPG2P98160 4391 aa7.81□□□□□ -1.16
PXN-201ENST00000228307 KRTAP3-2Q9BYR7 98 aa7.8□□□□□ -1.16
PXN-201ENST00000228307 KRTAP12-1P59990 96 aa7.77□□□□□ -1.16
PXN-201ENST00000228307 SEC61BP60468 96 aaKnown RBP7.77□□□□□ -1.17
PXN-201ENST00000228307 LRP2P98164 4655 aa7.75□□□□□ -1.17
PXN-201ENST00000228307 LPAP08519 4548 aa7.65□□□□□ -1.18
PXN-201ENST00000228307 M0R2T5 61 aa7.64□□□□□ -1.19
PXN-201ENST00000228307 HERC2O95714 4834 aa7.63□□□□□ -1.19
PXN-201ENST00000228307 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
PXN-201ENST00000228307 PKHD1L1Q86WI1 4243 aa7.62□□□□□ -1.19
PXN-201ENST00000228307 KRTAP15-1Q3LI76 137 aa7.57□□□□□ -1.2
PXN-201ENST00000228307 ABCA13Q86UQ4 5058 aa7.56□□□□□ -1.2
PXN-201ENST00000228307 A0A0A0MQY5 61 aa7.55□□□□□ -1.2
PXN-201ENST00000228307 TNXBP22105 4242 aa7.45□□□□□ -1.22
PXN-201ENST00000228307 MUC2Q02817 5179 aa7.44□□□□□ -1.22
PXN-201ENST00000228307 KRTAP4-1Q9BYQ7 146 aa7.36□□□□□ -1.23
PXN-201ENST00000228307 HERC1Q15751 4861 aa7.35□□□□□ -1.23
PXN-201ENST00000228307 TNP1P09430 55 aa7.32□□□□□ -1.24
PXN-201ENST00000228307 PP632Q6XCG6 107 aa7.31□□□□□ -1.24
PXN-201ENST00000228307 LORP23490 312 aaPredicted RBP7.27□□□□□ -1.25
PXN-201ENST00000228307 RNF213Q63HN8 5207 aa7.23□□□□□ -1.25
PXN-201ENST00000228307 BIRC6Q9NR09 4857 aa7.22□□□□□ -1.25
PXN-201ENST00000228307 PCLOQ9Y6V0 5065 aa7.15□□□□□ -1.26
PXN-201ENST00000228307 FAT4Q6V0I7 4981 aa7.12□□□□□ -1.27
PXN-201ENST00000228307 UBR4Q5T4S7 5183 aa7.05□□□□□ -1.28
PXN-201ENST00000228307 KRTAP10-10P60014 251 aa7.05□□□□□ -1.28
PXN-201ENST00000228307 HMCN2Q8NDA2 5059 aa6.8□□□□□ -1.32
PXN-201ENST00000228307 MUC17Q685J3 4493 aa6.72□□□□□ -1.33
PXN-201ENST00000228307 MT1HP80294 61 aa6.69□□□□□ -1.34
PXN-201ENST00000228307 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
PXN-201ENST00000228307 FSIP2Q5CZC0 6907 aa6.63□□□□□ -1.35
PXN-201ENST00000228307 LCE2CQ5TA81 110 aa6.6□□□□□ -1.35
PXN-201ENST00000228307 LCE3AQ5TA76 89 aa6.59□□□□□ -1.35
PXN-201ENST00000228307 MT1FP04733 61 aa6.56□□□□□ -1.36
PXN-201ENST00000228307 FLGP20930 4061 aaPredicted RBP6.56□□□□□ -1.36
PXN-201ENST00000228307 MT2AP02795 61 aa6.54□□□□□ -1.36
PXN-201ENST00000228307 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
PXN-201ENST00000228307 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
PXN-201ENST00000228307 USH2AO75445 5202 aa6.38□□□□□ -1.39
PXN-201ENST00000228307 KRTAP12-3P60328 96 aa6.36□□□□□ -1.39
PXN-201ENST00000228307 KRTAP10-12P60413 245 aa6.35□□□□□ -1.39
PXN-201ENST00000228307 KRTAP9-8Q9BYQ0 159 aa6.34□□□□□ -1.39
PXN-201ENST00000228307 PRO2289Q9P1D8 64 aa6.34□□□□□ -1.4
PXN-201ENST00000228307 SPRR2GQ9BYE4 73 aa6.33□□□□□ -1.4
PXN-201ENST00000228307 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
PXN-201ENST00000228307 INE1O15225 51 aa6.26□□□□□ -1.41
PXN-201ENST00000228307 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
PXN-201ENST00000228307 MT1BP07438 61 aa6.12□□□□□ -1.43
PXN-201ENST00000228307 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
PXN-201ENST00000228307 KMT2DO14686 5537 aa6.06□□□□□ -1.44
PXN-201ENST00000228307 KRTAP10-7P60409 375 aaPredicted RBP6.05□□□□□ -1.44
PXN-201ENST00000228307 MT1XP80297 61 aa6.03□□□□□ -1.44
PXN-201ENST00000228307 LCE2BO14633 110 aa6.02□□□□□ -1.45
PXN-201ENST00000228307 KRTAP10-5P60370 271 aa6.01□□□□□ -1.45
PXN-201ENST00000228307 KRTAP19-8Q3LI54 63 aa6□□□□□ -1.45
PXN-201ENST00000228307 KRTAP4-8A0A0G2JLE6 195 aa5.93□□□□□ -1.46
PXN-201ENST00000228307 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
PXN-201ENST00000228307 KRTAP19-5Q3LI72 72 aa5.89□□□□□ -1.47
PXN-201ENST00000228307 LCE2AQ5TA79 106 aaPredicted RBP5.85□□□□□ -1.47
PXN-201ENST00000228307 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
PXN-201ENST00000228307 CRCT1Q9UGL9 99 aa5.73□□□□□ -1.49
PXN-201ENST00000228307 DSTQ03001 7570 aaKnown RBP5.68□□□□□ -1.5
PXN-201ENST00000228307 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
PXN-201ENST00000228307 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.52
PXN-201ENST00000228307 OBSCNQ5VST9 7968 aa5.55□□□□□ -1.52
PXN-201ENST00000228307 MUC12Q9UKN1 5478 aa5.51□□□□□ -1.53
PXN-201ENST00000228307 FCGBPQ9Y6R7 5405 aaPredicted RBP5.51□□□□□ -1.53
PXN-201ENST00000228307 SYNE1Q8NF91 8797 aaKnown RBP5.5□□□□□ -1.53
PXN-201ENST00000228307 SPRR2FQ96RM1 72 aa5.45□□□□□ -1.54
PXN-201ENST00000228307 KRTAP9-6A8MVA2 160 aa5.36□□□□□ -1.55
PXN-201ENST00000228307 SYNE2Q8WXH0 6885 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms