RNA–Protein interactions for RNA: ENST00000226382.3

PHOX2B-201, Transcript of paired like homeobox 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2B, Length 3,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2B-201ENST00000226382 SACSQ9NZJ4 4579 aa10.85□□□□□ -0.67
PHOX2B-201ENST00000226382 C10orf95Q9H7T3 257 aa10.82□□□□□ -0.68
PHOX2B-201ENST00000226382 RPS29P62273 56 aaKnown RBP10.76□□□□□ -0.69
PHOX2B-201ENST00000226382 LRP1Q07954 4544 aaKnown RBP10.75□□□□□ -0.69
PHOX2B-201ENST00000226382 KRTAP13-4Q3LI77 160 aa10.73□□□□□ -0.69
PHOX2B-201ENST00000226382 HSPG2P98160 4391 aa10.64□□□□□ -0.71
PHOX2B-201ENST00000226382 RPL37P61927 97 aaKnown RBP10.63□□□□□ -0.71
PHOX2B-201ENST00000226382 KRTAP10-6P60371 365 aaPredicted RBP10.63□□□□□ -0.71
PHOX2B-201ENST00000226382 APOBP04114 4563 aaKnown RBP10.62□□□□□ -0.71
PHOX2B-201ENST00000226382 KRTAP10-8P60410 259 aa10.61□□□□□ -0.71
PHOX2B-201ENST00000226382 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
PHOX2B-201ENST00000226382 KRTAP10-4P60372 401 aaPredicted RBP10.58□□□□□ -0.72
PHOX2B-201ENST00000226382 PKHD1L1Q86WI1 4243 aa10.56□□□□□ -0.72
PHOX2B-201ENST00000226382 KRTAP3-2Q9BYR7 98 aa10.5□□□□□ -0.73
PHOX2B-201ENST00000226382 S4R3F8 94 aa10.49□□□□□ -0.73
PHOX2B-201ENST00000226382 FAT3Q8TDW7 4589 aa10.46□□□□□ -0.74
PHOX2B-201ENST00000226382 LPAP08519 4548 aa10.4□□□□□ -0.74
PHOX2B-201ENST00000226382 KMT2CQ8NEZ4 4911 aaKnown RBP10.4□□□□□ -0.74
PHOX2B-201ENST00000226382 KRTAP12-2P59991 146 aa10.4□□□□□ -0.74
PHOX2B-201ENST00000226382 SEC61BP60468 96 aaKnown RBP10.4□□□□□ -0.74
PHOX2B-201ENST00000226382 A0A1B0GVY2 172 aa10.39□□□□□ -0.75
PHOX2B-201ENST00000226382 XP32Q5T750 250 aa10.36□□□□□ -0.75
PHOX2B-201ENST00000226382 TNXBP22105 4242 aa10.28□□□□□ -0.76
PHOX2B-201ENST00000226382 LRP2P98164 4655 aa10.24□□□□□ -0.77
PHOX2B-201ENST00000226382 Q5VSD8 79 aa10.24□□□□□ -0.77
PHOX2B-201ENST00000226382 RYR2Q92736 4967 aa10.21□□□□□ -0.77
PHOX2B-201ENST00000226382 KRTAP12-1P59990 96 aa10.19□□□□□ -0.78
PHOX2B-201ENST00000226382 KIAA1109Q2LD37 5005 aa10.1□□□□□ -0.79
PHOX2B-201ENST00000226382 KRTAP17-1Q9BYP8 105 aa10.07□□□□□ -0.8
PHOX2B-201ENST00000226382 RYR1P21817 5038 aa10.02□□□□□ -0.81
PHOX2B-201ENST00000226382 M0QZ58 72 aa9.99□□□□□ -0.81
PHOX2B-201ENST00000226382 PLAC4Q8WY50 150 aa9.99□□□□□ -0.81
PHOX2B-201ENST00000226382 RYR3Q15413 4870 aa9.97□□□□□ -0.81
PHOX2B-201ENST00000226382 R4GN34 69 aa9.89□□□□□ -0.83
PHOX2B-201ENST00000226382 ABCA13Q86UQ4 5058 aa9.87□□□□□ -0.83
PHOX2B-201ENST00000226382 MT1HL1P0DM35 61 aa9.87□□□□□ -0.83
PHOX2B-201ENST00000226382 LORP23490 312 aaPredicted RBP9.79□□□□□ -0.84
PHOX2B-201ENST00000226382 J3QL48 77 aa9.64□□□□□ -0.87
PHOX2B-201ENST00000226382 CAMK2N1Q7Z7J9 78 aa9.64□□□□□ -0.87
PHOX2B-201ENST00000226382 MUC2Q02817 5179 aa9.6□□□□□ -0.87
PHOX2B-201ENST00000226382 EPPK1P58107 5090 aaKnown RBP9.6□□□□□ -0.87
PHOX2B-201ENST00000226382 KRTAP4-5Q9BYR2 181 aa9.53□□□□□ -0.88
PHOX2B-201ENST00000226382 KRTAP21-3Q3LHN1 58 aa9.49□□□□□ -0.89
PHOX2B-201ENST00000226382 KRTAP4-1Q9BYQ7 146 aa9.46□□□□□ -0.89
PHOX2B-201ENST00000226382 MUC17Q685J3 4493 aa9.35□□□□□ -0.91
PHOX2B-201ENST00000226382 PRO2289Q9P1D8 64 aa9.33□□□□□ -0.92
PHOX2B-201ENST00000226382 HERC2O95714 4834 aa9.12□□□□□ -0.95
PHOX2B-201ENST00000226382 FAT4Q6V0I7 4981 aa9.1□□□□□ -0.95
PHOX2B-201ENST00000226382 PP632Q6XCG6 107 aa9.07□□□□□ -0.96
PHOX2B-201ENST00000226382 PCLOQ9Y6V0 5065 aa9.05□□□□□ -0.96
PHOX2B-201ENST00000226382 KRTAP19-2Q3LHN2 52 aa9.04□□□□□ -0.96
PHOX2B-201ENST00000226382 TNP1P09430 55 aa8.99□□□□□ -0.97
PHOX2B-201ENST00000226382 FLGP20930 4061 aaPredicted RBP8.89□□□□□ -0.99
PHOX2B-201ENST00000226382 HERC1Q15751 4861 aa8.88□□□□□ -0.99
PHOX2B-201ENST00000226382 INE1O15225 51 aa8.83□□□□□ -1
PHOX2B-201ENST00000226382 SPRR5A0A1B0GTR4 108 aa8.8□□□□□ -1
PHOX2B-201ENST00000226382 RNF213Q63HN8 5207 aa8.76□□□□□ -1.01
PHOX2B-201ENST00000226382 M0R2T5 61 aa8.7□□□□□ -1.02
PHOX2B-201ENST00000226382 BIRC6Q9NR09 4857 aa8.64□□□□□ -1.03
PHOX2B-201ENST00000226382 HMCN2Q8NDA2 5059 aa8.59□□□□□ -1.03
PHOX2B-201ENST00000226382 LCE3AQ5TA76 89 aa8.59□□□□□ -1.04
PHOX2B-201ENST00000226382 KRTAP19-1Q8IUB9 90 aa8.52□□□□□ -1.05
PHOX2B-201ENST00000226382 UBR4Q5T4S7 5183 aa8.48□□□□□ -1.05
PHOX2B-201ENST00000226382 LCE2CQ5TA81 110 aa8.45□□□□□ -1.06
PHOX2B-201ENST00000226382 KRTAP10-10P60014 251 aa8.44□□□□□ -1.06
PHOX2B-201ENST00000226382 KRTAP23-1A1A580 65 aa8.43□□□□□ -1.06
PHOX2B-201ENST00000226382 SPRR2GQ9BYE4 73 aa8.4□□□□□ -1.06
PHOX2B-201ENST00000226382 MT1FP04733 61 aa8.31□□□□□ -1.08
PHOX2B-201ENST00000226382 MT1HP80294 61 aa8.25□□□□□ -1.09
PHOX2B-201ENST00000226382 MT2AP02795 61 aa8.23□□□□□ -1.09
PHOX2B-201ENST00000226382 KRTAP12-3P60328 96 aa8.09□□□□□ -1.11
PHOX2B-201ENST00000226382 KRTAP8-1Q8IUC2 63 aa8.08□□□□□ -1.12
PHOX2B-201ENST00000226382 KRTAP9-8Q9BYQ0 159 aa8.08□□□□□ -1.12
PHOX2B-201ENST00000226382 KRTAP10-5P60370 271 aa8.06□□□□□ -1.12
PHOX2B-201ENST00000226382 KRTAP10-12P60413 245 aa8.05□□□□□ -1.12
PHOX2B-201ENST00000226382 MT1XP80297 61 aa8.05□□□□□ -1.12
PHOX2B-201ENST00000226382 KMT2DO14686 5537 aa8.05□□□□□ -1.12
PHOX2B-201ENST00000226382 USH2AO75445 5202 aa8.03□□□□□ -1.12
PHOX2B-201ENST00000226382 KRTAP10-7P60409 375 aaPredicted RBP8.02□□□□□ -1.13
PHOX2B-201ENST00000226382 MT1BP07438 61 aa8.01□□□□□ -1.13
PHOX2B-201ENST00000226382 KRTAP19-8Q3LI54 63 aa7.91□□□□□ -1.14
PHOX2B-201ENST00000226382 LCE2DQ5TA82 110 aaPredicted RBP7.84□□□□□ -1.15
PHOX2B-201ENST00000226382 KRTAP19-5Q3LI72 72 aa7.7□□□□□ -1.18
PHOX2B-201ENST00000226382 KRTAP9-3Q9BYQ3 159 aa7.68□□□□□ -1.18
PHOX2B-201ENST00000226382 KRTAP4-8A0A0G2JLE6 195 aa7.6□□□□□ -1.19
PHOX2B-201ENST00000226382 KRTAP4-8Q9BYQ9 185 aa7.6□□□□□ -1.19
PHOX2B-201ENST00000226382 LCE3CQ5T5A8 94 aa7.55□□□□□ -1.2
PHOX2B-201ENST00000226382 KRTAP4-7Q9BYR0 210 aa7.5□□□□□ -1.21
PHOX2B-201ENST00000226382 KRTAP9-6A8MVA2 160 aa7.47□□□□□ -1.21
PHOX2B-201ENST00000226382 LCE2BO14633 110 aa7.47□□□□□ -1.21
PHOX2B-201ENST00000226382 FSIP2Q5CZC0 6907 aa7.37□□□□□ -1.23
PHOX2B-201ENST00000226382 KRTAP19-7Q3SYF9 63 aa7.16□□□□□ -1.26
PHOX2B-201ENST00000226382 LCE2AQ5TA79 106 aaPredicted RBP7.07□□□□□ -1.28
PHOX2B-201ENST00000226382 KRTAP2-3P0C7H8 128 aa7.03□□□□□ -1.28
PHOX2B-201ENST00000226382 KRTAP2-4Q9BYR9 128 aa7.03□□□□□ -1.28
PHOX2B-201ENST00000226382 KRTAP2-1Q9BYU5 128 aa7.03□□□□□ -1.28
PHOX2B-201ENST00000226382 DSTQ03001 7570 aaKnown RBP7.01□□□□□ -1.29
PHOX2B-201ENST00000226382 CRCT1Q9UGL9 99 aa6.98□□□□□ -1.29
PHOX2B-201ENST00000226382 MT1LQ93083 61 aa6.96□□□□□ -1.29
PHOX2B-201ENST00000226382 MUC12Q9UKN1 5478 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms