RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 APOBP04114 4563 aaKnown RBP8.85□□□□□ -0.99
H2AFV-201ENST00000222690 KRTAP13-4Q3LI77 160 aa8.85□□□□□ -0.99
H2AFV-201ENST00000222690 KRTAP10-8P60410 259 aa8.83□□□□□ -1
H2AFV-201ENST00000222690 KRTAP10-6P60371 365 aaPredicted RBP8.82□□□□□ -1
H2AFV-201ENST00000222690 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
H2AFV-201ENST00000222690 P0C880 135 aa8.78□□□□□ -1
H2AFV-201ENST00000222690 Q5VSD8 79 aa8.77□□□□□ -1.01
H2AFV-201ENST00000222690 SPINT4Q6UDR6 99 aa8.77□□□□□ -1.01
H2AFV-201ENST00000222690 PKHD1L1Q86WI1 4243 aa8.76□□□□□ -1.01
H2AFV-201ENST00000222690 XP32Q5T750 250 aa8.76□□□□□ -1.01
H2AFV-201ENST00000222690 C10orf95Q9H7T3 257 aa8.75□□□□□ -1.01
H2AFV-201ENST00000222690 HSPG2P98160 4391 aa8.73□□□□□ -1.01
H2AFV-201ENST00000222690 KRTAP3-2Q9BYR7 98 aa8.71□□□□□ -1.02
H2AFV-201ENST00000222690 FAT3Q8TDW7 4589 aa8.68□□□□□ -1.02
H2AFV-201ENST00000222690 KMT2CQ8NEZ4 4911 aaKnown RBP8.66□□□□□ -1.02
H2AFV-201ENST00000222690 TPRXLQ17RH7 258 aa8.65□□□□□ -1.02
H2AFV-201ENST00000222690 KRTAP12-2P59991 146 aa8.61□□□□□ -1.03
H2AFV-201ENST00000222690 RYR2Q92736 4967 aa8.57□□□□□ -1.04
H2AFV-201ENST00000222690 TNXBP22105 4242 aa8.53□□□□□ -1.04
H2AFV-201ENST00000222690 LPAP08519 4548 aa8.47□□□□□ -1.05
H2AFV-201ENST00000222690 KRTAP12-1P59990 96 aa8.46□□□□□ -1.05
H2AFV-201ENST00000222690 LRP2P98164 4655 aa8.45□□□□□ -1.06
H2AFV-201ENST00000222690 KIAA1109Q2LD37 5005 aa8.44□□□□□ -1.06
H2AFV-201ENST00000222690 KRTAP21-3Q3LHN1 58 aa8.43□□□□□ -1.06
H2AFV-201ENST00000222690 KRTAP17-1Q9BYP8 105 aa8.41□□□□□ -1.06
H2AFV-201ENST00000222690 M0QZ58 72 aa8.4□□□□□ -1.07
H2AFV-201ENST00000222690 NDUFAF8A1L188 74 aa8.38□□□□□ -1.07
H2AFV-201ENST00000222690 MT1HL1P0DM35 61 aa8.38□□□□□ -1.07
H2AFV-201ENST00000222690 RYR3Q15413 4870 aa8.35□□□□□ -1.07
H2AFV-201ENST00000222690 R4GN34 69 aa8.35□□□□□ -1.07
H2AFV-201ENST00000222690 RYR1P21817 5038 aa8.32□□□□□ -1.08
H2AFV-201ENST00000222690 KRTAP15-1Q3LI76 137 aa8.22□□□□□ -1.09
H2AFV-201ENST00000222690 ABCA13Q86UQ4 5058 aa8.13□□□□□ -1.11
H2AFV-201ENST00000222690 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
H2AFV-201ENST00000222690 SEC61BP60468 96 aaKnown RBP8.06□□□□□ -1.12
H2AFV-201ENST00000222690 KRTAP4-5Q9BYR2 181 aa8.06□□□□□ -1.12
H2AFV-201ENST00000222690 CAMK2N1Q7Z7J9 78 aa8.03□□□□□ -1.12
H2AFV-201ENST00000222690 EPPK1P58107 5090 aaKnown RBP8.01□□□□□ -1.13
H2AFV-201ENST00000222690 J3QL48 77 aa8□□□□□ -1.13
H2AFV-201ENST00000222690 PLAC4Q8WY50 150 aa7.95□□□□□ -1.14
H2AFV-201ENST00000222690 KRTAP4-1Q9BYQ7 146 aa7.93□□□□□ -1.14
H2AFV-201ENST00000222690 MUC2Q02817 5179 aa7.85□□□□□ -1.15
H2AFV-201ENST00000222690 LUZP6Q538Z0 58 aa7.76□□□□□ -1.17
H2AFV-201ENST00000222690 MUC17Q685J3 4493 aa7.75□□□□□ -1.17
H2AFV-201ENST00000222690 HERC2O95714 4834 aa7.67□□□□□ -1.18
H2AFV-201ENST00000222690 PP632Q6XCG6 107 aa7.66□□□□□ -1.18
H2AFV-201ENST00000222690 TNP1P09430 55 aa7.59□□□□□ -1.19
H2AFV-201ENST00000222690 KRTAP19-2Q3LHN2 52 aa7.57□□□□□ -1.2
H2AFV-201ENST00000222690 M0R2T5 61 aa7.47□□□□□ -1.21
H2AFV-201ENST00000222690 FAT4Q6V0I7 4981 aa7.46□□□□□ -1.22
H2AFV-201ENST00000222690 A0A0A0MQY5 61 aa7.42□□□□□ -1.22
H2AFV-201ENST00000222690 FLGP20930 4061 aaPredicted RBP7.42□□□□□ -1.22
H2AFV-201ENST00000222690 PCLOQ9Y6V0 5065 aa7.4□□□□□ -1.22
H2AFV-201ENST00000222690 HERC1Q15751 4861 aa7.37□□□□□ -1.23
H2AFV-201ENST00000222690 BIRC6Q9NR09 4857 aa7.27□□□□□ -1.25
H2AFV-201ENST00000222690 RNF213Q63HN8 5207 aa7.22□□□□□ -1.25
H2AFV-201ENST00000222690 KRTAP10-10P60014 251 aa7.19□□□□□ -1.26
H2AFV-201ENST00000222690 LCE3AQ5TA76 89 aa7.15□□□□□ -1.26
H2AFV-201ENST00000222690 KRTAP19-1Q8IUB9 90 aa7.15□□□□□ -1.26
H2AFV-201ENST00000222690 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
H2AFV-201ENST00000222690 LCE2CQ5TA81 110 aa7.13□□□□□ -1.27
H2AFV-201ENST00000222690 SPRR2GQ9BYE4 73 aa7.12□□□□□ -1.27
H2AFV-201ENST00000222690 HMCN2Q8NDA2 5059 aa7.11□□□□□ -1.27
H2AFV-201ENST00000222690 SPRR5A0A1B0GTR4 108 aa7.05□□□□□ -1.28
H2AFV-201ENST00000222690 UBR4Q5T4S7 5183 aa7.04□□□□□ -1.28
H2AFV-201ENST00000222690 MT1HP80294 61 aa7.01□□□□□ -1.29
H2AFV-201ENST00000222690 MT1FP04733 61 aa7.01□□□□□ -1.29
H2AFV-201ENST00000222690 MT2AP02795 61 aa6.97□□□□□ -1.29
H2AFV-201ENST00000222690 KRTAP9-8Q9BYQ0 159 aa6.83□□□□□ -1.32
H2AFV-201ENST00000222690 KRTAP10-12P60413 245 aa6.79□□□□□ -1.32
H2AFV-201ENST00000222690 KRTAP12-3P60328 96 aa6.79□□□□□ -1.32
H2AFV-201ENST00000222690 KRTAP8-1Q8IUC2 63 aa6.78□□□□□ -1.32
H2AFV-201ENST00000222690 KRTAP10-5P60370 271 aa6.76□□□□□ -1.33
H2AFV-201ENST00000222690 MT1XP80297 61 aa6.75□□□□□ -1.33
H2AFV-201ENST00000222690 MT1BP07438 61 aa6.74□□□□□ -1.33
H2AFV-201ENST00000222690 KRTAP19-8Q3LI54 63 aa6.72□□□□□ -1.33
H2AFV-201ENST00000222690 KRTAP10-7P60409 375 aaPredicted RBP6.69□□□□□ -1.34
H2AFV-201ENST00000222690 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
H2AFV-201ENST00000222690 USH2AO75445 5202 aa6.56□□□□□ -1.36
H2AFV-201ENST00000222690 KMT2DO14686 5537 aa6.53□□□□□ -1.36
H2AFV-201ENST00000222690 KRTAP9-3Q9BYQ3 159 aa6.51□□□□□ -1.37
H2AFV-201ENST00000222690 INE1O15225 51 aa6.46□□□□□ -1.38
H2AFV-201ENST00000222690 KRTAP19-5Q3LI72 72 aa6.45□□□□□ -1.38
H2AFV-201ENST00000222690 KRTAP4-8A0A0G2JLE6 195 aa6.33□□□□□ -1.4
H2AFV-201ENST00000222690 KRTAP4-8Q9BYQ9 185 aa6.33□□□□□ -1.4
H2AFV-201ENST00000222690 LCE3CQ5T5A8 94 aa6.32□□□□□ -1.4
H2AFV-201ENST00000222690 LCE2BO14633 110 aa6.31□□□□□ -1.4
H2AFV-201ENST00000222690 LCE2DQ5TA82 110 aaPredicted RBP6.17□□□□□ -1.42
H2AFV-201ENST00000222690 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
H2AFV-201ENST00000222690 KRTAP9-6A8MVA2 160 aa6.13□□□□□ -1.43
H2AFV-201ENST00000222690 FSIP2Q5CZC0 6907 aa6.1□□□□□ -1.43
H2AFV-201ENST00000222690 KRTAP19-7Q3SYF9 63 aa5.99□□□□□ -1.45
H2AFV-201ENST00000222690 LCE2AQ5TA79 106 aaPredicted RBP5.9□□□□□ -1.47
H2AFV-201ENST00000222690 MT1LQ93083 61 aa5.86□□□□□ -1.47
H2AFV-201ENST00000222690 KRTAP2-3P0C7H8 128 aa5.82□□□□□ -1.48
H2AFV-201ENST00000222690 KRTAP2-4Q9BYR9 128 aa5.82□□□□□ -1.48
H2AFV-201ENST00000222690 KRTAP2-1Q9BYU5 128 aa5.82□□□□□ -1.48
H2AFV-201ENST00000222690 MT1EP04732 61 aa5.82□□□□□ -1.48
H2AFV-201ENST00000222690 CRCT1Q9UGL9 99 aa5.82□□□□□ -1.48
H2AFV-201ENST00000222690 DSTQ03001 7570 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms