RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 SPINT4Q6UDR6 99 aa5.76□□□□□ -1.49
NEFM-201ENST00000221166 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
NEFM-201ENST00000221166 XP32Q5T750 250 aa5.73□□□□□ -1.49
NEFM-201ENST00000221166 J3QL48 77 aa5.73□□□□□ -1.49
NEFM-201ENST00000221166 P0C880 135 aa5.71□□□□□ -1.5
NEFM-201ENST00000221166 MYCBP2O75592 4640 aa5.71□□□□□ -1.5
NEFM-201ENST00000221166 KRTAP13-4Q3LI77 160 aa5.71□□□□□ -1.5
NEFM-201ENST00000221166 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
NEFM-201ENST00000221166 KRTAP10-6P60371 365 aaPredicted RBP5.69□□□□□ -1.5
NEFM-201ENST00000221166 APOBP04114 4563 aaKnown RBP5.68□□□□□ -1.5
NEFM-201ENST00000221166 KRTAP3-3Q9BYR6 98 aa5.68□□□□□ -1.5
NEFM-201ENST00000221166 C10orf95Q9H7T3 257 aa5.67□□□□□ -1.5
NEFM-201ENST00000221166 KRTAP3-2Q9BYR7 98 aa5.62□□□□□ -1.51
NEFM-201ENST00000221166 TPRXLQ17RH7 258 aa5.57□□□□□ -1.52
NEFM-201ENST00000221166 FAT3Q8TDW7 4589 aa5.57□□□□□ -1.52
NEFM-201ENST00000221166 PKHD1L1Q86WI1 4243 aa5.57□□□□□ -1.52
NEFM-201ENST00000221166 KRTAP12-2P59991 146 aa5.57□□□□□ -1.52
NEFM-201ENST00000221166 HSPG2P98160 4391 aa5.54□□□□□ -1.52
NEFM-201ENST00000221166 KMT2CQ8NEZ4 4911 aaKnown RBP5.53□□□□□ -1.52
NEFM-201ENST00000221166 RYR2Q92736 4967 aa5.53□□□□□ -1.52
NEFM-201ENST00000221166 M0QZ58 72 aa5.52□□□□□ -1.53
NEFM-201ENST00000221166 R4GN34 69 aa5.5□□□□□ -1.53
NEFM-201ENST00000221166 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
NEFM-201ENST00000221166 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
NEFM-201ENST00000221166 KRTAP17-1Q9BYP8 105 aa5.46□□□□□ -1.54
NEFM-201ENST00000221166 KIAA1109Q2LD37 5005 aa5.46□□□□□ -1.54
NEFM-201ENST00000221166 TNXBP22105 4242 aa5.45□□□□□ -1.54
NEFM-201ENST00000221166 NDUFAF8A1L188 74 aa5.41□□□□□ -1.54
NEFM-201ENST00000221166 RYR3Q15413 4870 aa5.4□□□□□ -1.54
NEFM-201ENST00000221166 LRP2P98164 4655 aa5.4□□□□□ -1.54
NEFM-201ENST00000221166 RYR1P21817 5038 aa5.4□□□□□ -1.55
NEFM-201ENST00000221166 SEC61BP60468 96 aaKnown RBP5.36□□□□□ -1.55
NEFM-201ENST00000221166 LPAP08519 4548 aa5.35□□□□□ -1.55
NEFM-201ENST00000221166 CAMK2N1Q7Z7J9 78 aa5.32□□□□□ -1.56
NEFM-201ENST00000221166 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
NEFM-201ENST00000221166 LORP23490 312 aaPredicted RBP5.26□□□□□ -1.57
NEFM-201ENST00000221166 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
NEFM-201ENST00000221166 A0A0A0MQY5 61 aa5.19□□□□□ -1.58
NEFM-201ENST00000221166 M0R2T5 61 aa5.18□□□□□ -1.58
NEFM-201ENST00000221166 ABCA13Q86UQ4 5058 aa5.17□□□□□ -1.58
NEFM-201ENST00000221166 PLAC4Q8WY50 150 aa5.17□□□□□ -1.58
NEFM-201ENST00000221166 KRTAP4-1Q9BYQ7 146 aa5.17□□□□□ -1.58
NEFM-201ENST00000221166 EPPK1P58107 5090 aaKnown RBP5.15□□□□□ -1.59
NEFM-201ENST00000221166 LUZP6Q538Z0 58 aa5.09□□□□□ -1.59
NEFM-201ENST00000221166 PP632Q6XCG6 107 aa5□□□□□ -1.61
NEFM-201ENST00000221166 TNP1P09430 55 aa4.99□□□□□ -1.61
NEFM-201ENST00000221166 HERC2O95714 4834 aa4.98□□□□□ -1.61
NEFM-201ENST00000221166 MUC2Q02817 5179 aa4.98□□□□□ -1.61
NEFM-201ENST00000221166 MUC17Q685J3 4493 aa4.94□□□□□ -1.62
NEFM-201ENST00000221166 KRTAP19-2Q3LHN2 52 aa4.87□□□□□ -1.63
NEFM-201ENST00000221166 KRTAP10-10P60014 251 aa4.78□□□□□ -1.64
NEFM-201ENST00000221166 BIRC6Q9NR09 4857 aa4.78□□□□□ -1.64
NEFM-201ENST00000221166 FLGP20930 4061 aaPredicted RBP4.78□□□□□ -1.64
NEFM-201ENST00000221166 HERC1Q15751 4861 aa4.74□□□□□ -1.65
NEFM-201ENST00000221166 FAT4Q6V0I7 4981 aa4.74□□□□□ -1.65
NEFM-201ENST00000221166 PCLOQ9Y6V0 5065 aa4.67□□□□□ -1.66
NEFM-201ENST00000221166 LCE3AQ5TA76 89 aa4.65□□□□□ -1.66
NEFM-201ENST00000221166 KRTAP19-1Q8IUB9 90 aa4.63□□□□□ -1.67
NEFM-201ENST00000221166 LCE2CQ5TA81 110 aa4.63□□□□□ -1.67
NEFM-201ENST00000221166 RNF213Q63HN8 5207 aa4.63□□□□□ -1.67
NEFM-201ENST00000221166 KRTAP23-1A1A580 65 aa4.63□□□□□ -1.67
NEFM-201ENST00000221166 SPRR2GQ9BYE4 73 aa4.63□□□□□ -1.67
NEFM-201ENST00000221166 MT1HP80294 61 aa4.6□□□□□ -1.67
NEFM-201ENST00000221166 MT1FP04733 61 aa4.58□□□□□ -1.68
NEFM-201ENST00000221166 HMCN2Q8NDA2 5059 aa4.58□□□□□ -1.68
NEFM-201ENST00000221166 MT2AP02795 61 aa4.56□□□□□ -1.68
NEFM-201ENST00000221166 UBR4Q5T4S7 5183 aa4.51□□□□□ -1.69
NEFM-201ENST00000221166 SPRR5A0A1B0GTR4 108 aa4.49□□□□□ -1.69
NEFM-201ENST00000221166 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
NEFM-201ENST00000221166 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
NEFM-201ENST00000221166 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
NEFM-201ENST00000221166 KRTAP8-1Q8IUC2 63 aa4.39□□□□□ -1.71
NEFM-201ENST00000221166 MT1BP07438 61 aa4.38□□□□□ -1.71
NEFM-201ENST00000221166 KRTAP10-5P60370 271 aa4.38□□□□□ -1.71
NEFM-201ENST00000221166 MT1XP80297 61 aa4.38□□□□□ -1.71
NEFM-201ENST00000221166 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
NEFM-201ENST00000221166 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
NEFM-201ENST00000221166 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
NEFM-201ENST00000221166 KRTAP9-3Q9BYQ3 159 aa4.25□□□□□ -1.73
NEFM-201ENST00000221166 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
NEFM-201ENST00000221166 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.74
NEFM-201ENST00000221166 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
NEFM-201ENST00000221166 INE1O15225 51 aa4.18□□□□□ -1.74
NEFM-201ENST00000221166 USH2AO75445 5202 aa4.17□□□□□ -1.74
NEFM-201ENST00000221166 KMT2DO14686 5537 aa4.15□□□□□ -1.74
NEFM-201ENST00000221166 KRTAP4-8A0A0G2JLE6 195 aa4.13□□□□□ -1.75
NEFM-201ENST00000221166 KRTAP4-8Q9BYQ9 185 aa4.13□□□□□ -1.75
NEFM-201ENST00000221166 LCE2BO14633 110 aa4.12□□□□□ -1.75
NEFM-201ENST00000221166 LCE3CQ5T5A8 94 aa4.11□□□□□ -1.75
NEFM-201ENST00000221166 CRCT1Q9UGL9 99 aa4.02□□□□□ -1.77
NEFM-201ENST00000221166 KRTAP4-7Q9BYR0 210 aa4.01□□□□□ -1.77
NEFM-201ENST00000221166 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
NEFM-201ENST00000221166 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
NEFM-201ENST00000221166 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
NEFM-201ENST00000221166 LCE2AQ5TA79 106 aaPredicted RBP3.86□□□□□ -1.79
NEFM-201ENST00000221166 MT1LQ93083 61 aa3.81□□□□□ -1.8
NEFM-201ENST00000221166 MT1EP04732 61 aa3.79□□□□□ -1.8
NEFM-201ENST00000221166 KRTAP2-3P0C7H8 128 aa3.73□□□□□ -1.81
NEFM-201ENST00000221166 KRTAP4-3Q9BYR4 195 aa3.73□□□□□ -1.81
NEFM-201ENST00000221166 KRTAP2-4Q9BYR9 128 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms