RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 SMR3BP02814 79 aaPredicted RBP7.4□□□□□ -1.22
GABPB1-201ENST00000220429 C10orf95Q9H7T3 257 aa7.36□□□□□ -1.23
GABPB1-201ENST00000220429 KRTAP10-4P60372 401 aaPredicted RBP7.33□□□□□ -1.24
GABPB1-201ENST00000220429 COX6B2Q6YFQ2 88 aa7.32□□□□□ -1.24
GABPB1-201ENST00000220429 RPS29P62273 56 aaKnown RBP7.29□□□□□ -1.24
GABPB1-201ENST00000220429 RPL37P61927 97 aaKnown RBP7.29□□□□□ -1.24
GABPB1-201ENST00000220429 HSPG2P98160 4391 aa7.24□□□□□ -1.25
GABPB1-201ENST00000220429 RYR3Q15413 4870 aa7.24□□□□□ -1.25
GABPB1-201ENST00000220429 TNXBP22105 4242 aa7.23□□□□□ -1.25
GABPB1-201ENST00000220429 LRP1Q07954 4544 aaKnown RBP7.22□□□□□ -1.25
GABPB1-201ENST00000220429 FAT3Q8TDW7 4589 aa7.2□□□□□ -1.26
GABPB1-201ENST00000220429 RYR1P21817 5038 aa7.17□□□□□ -1.26
GABPB1-201ENST00000220429 KRTAP3-1Q9BYR8 98 aa7.15□□□□□ -1.26
GABPB1-201ENST00000220429 C9orf92A6NGG3 77 aa7.15□□□□□ -1.26
GABPB1-201ENST00000220429 SEC61BP60468 96 aaKnown RBP7.14□□□□□ -1.27
GABPB1-201ENST00000220429 A0A0D9SG42 100 aa7.13□□□□□ -1.27
GABPB1-201ENST00000220429 KRTAP13-4Q3LI77 160 aa7.07□□□□□ -1.28
GABPB1-201ENST00000220429 Q5VSD8 79 aa7.05□□□□□ -1.28
GABPB1-201ENST00000220429 KIAA1109Q2LD37 5005 aa7.05□□□□□ -1.28
GABPB1-201ENST00000220429 DMBT1Q9UGM3 2413 aaPredicted RBP7.04□□□□□ -1.28
GABPB1-201ENST00000220429 KRTAP10-8P60410 259 aa7.03□□□□□ -1.28
GABPB1-201ENST00000220429 MYCBP2O75592 4640 aa7.02□□□□□ -1.29
GABPB1-201ENST00000220429 KRTAP10-6P60371 365 aaPredicted RBP7.01□□□□□ -1.29
GABPB1-201ENST00000220429 KRTAP17-1Q9BYP8 105 aa7□□□□□ -1.29
GABPB1-201ENST00000220429 S4R3F8 94 aa7□□□□□ -1.29
GABPB1-201ENST00000220429 EPPK1P58107 5090 aaKnown RBP6.97□□□□□ -1.29
GABPB1-201ENST00000220429 XP32Q5T750 250 aa6.96□□□□□ -1.3
GABPB1-201ENST00000220429 LCE2DQ5TA82 110 aaPredicted RBP6.95□□□□□ -1.3
GABPB1-201ENST00000220429 KRTAP3-2Q9BYR7 98 aa6.94□□□□□ -1.3
GABPB1-201ENST00000220429 KRTAP12-2P59991 146 aa6.92□□□□□ -1.3
GABPB1-201ENST00000220429 PLAC4Q8WY50 150 aa6.88□□□□□ -1.31
GABPB1-201ENST00000220429 MT1HL1P0DM35 61 aa6.86□□□□□ -1.31
GABPB1-201ENST00000220429 KRTAP12-1P59990 96 aa6.81□□□□□ -1.32
GABPB1-201ENST00000220429 KRTAP3-3Q9BYR6 98 aa6.79□□□□□ -1.32
GABPB1-201ENST00000220429 LRP2P98164 4655 aa6.76□□□□□ -1.33
GABPB1-201ENST00000220429 LPAP08519 4548 aa6.76□□□□□ -1.33
GABPB1-201ENST00000220429 ABCA13Q86UQ4 5058 aa6.75□□□□□ -1.33
GABPB1-201ENST00000220429 KRTAP4-5Q9BYR2 181 aa6.68□□□□□ -1.34
GABPB1-201ENST00000220429 CAMK2N1Q7Z7J9 78 aa6.67□□□□□ -1.34
GABPB1-201ENST00000220429 HERC2O95714 4834 aa6.59□□□□□ -1.35
GABPB1-201ENST00000220429 M0QZ58 72 aa6.52□□□□□ -1.37
GABPB1-201ENST00000220429 MUC17Q685J3 4493 aa6.51□□□□□ -1.37
GABPB1-201ENST00000220429 BIRC6Q9NR09 4857 aa6.48□□□□□ -1.37
GABPB1-201ENST00000220429 PRO2289Q9P1D8 64 aa6.47□□□□□ -1.37
GABPB1-201ENST00000220429 J3QL48 77 aa6.41□□□□□ -1.38
GABPB1-201ENST00000220429 PP632Q6XCG6 107 aa6.37□□□□□ -1.39
GABPB1-201ENST00000220429 KRTAP4-1Q9BYQ7 146 aa6.34□□□□□ -1.4
GABPB1-201ENST00000220429 HERC1Q15751 4861 aa6.28□□□□□ -1.4
GABPB1-201ENST00000220429 PCLOQ9Y6V0 5065 aa6.26□□□□□ -1.41
GABPB1-201ENST00000220429 MUC2Q02817 5179 aa6.25□□□□□ -1.41
GABPB1-201ENST00000220429 SPRR5A0A1B0GTR4 108 aa6.25□□□□□ -1.41
GABPB1-201ENST00000220429 HMCN2Q8NDA2 5059 aa6.22□□□□□ -1.41
GABPB1-201ENST00000220429 KRTAP19-2Q3LHN2 52 aa6.21□□□□□ -1.41
GABPB1-201ENST00000220429 R4GN34 69 aa6.2□□□□□ -1.42
GABPB1-201ENST00000220429 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
GABPB1-201ENST00000220429 INE1O15225 51 aa6.18□□□□□ -1.42
GABPB1-201ENST00000220429 LORP23490 312 aaPredicted RBP6.1□□□□□ -1.43
GABPB1-201ENST00000220429 FAT4Q6V0I7 4981 aa5.98□□□□□ -1.45
GABPB1-201ENST00000220429 RNF213Q63HN8 5207 aa5.96□□□□□ -1.46
GABPB1-201ENST00000220429 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
GABPB1-201ENST00000220429 UBR4Q5T4S7 5183 aa5.91□□□□□ -1.46
GABPB1-201ENST00000220429 LCE2CQ5TA81 110 aa5.9□□□□□ -1.46
GABPB1-201ENST00000220429 TNP1P09430 55 aa5.86□□□□□ -1.47
GABPB1-201ENST00000220429 LCE2BO14633 110 aa5.8□□□□□ -1.48
GABPB1-201ENST00000220429 MT1HP80294 61 aa5.74□□□□□ -1.49
GABPB1-201ENST00000220429 M0R2T5 61 aa5.7□□□□□ -1.5
GABPB1-201ENST00000220429 SPRR2GQ9BYE4 73 aa5.66□□□□□ -1.5
GABPB1-201ENST00000220429 KRTAP19-1Q8IUB9 90 aa5.65□□□□□ -1.5
GABPB1-201ENST00000220429 MT2AP02795 61 aa5.61□□□□□ -1.51
GABPB1-201ENST00000220429 MT1FP04733 61 aa5.61□□□□□ -1.51
GABPB1-201ENST00000220429 KRTAP9-8Q9BYQ0 159 aa5.59□□□□□ -1.51
GABPB1-201ENST00000220429 KRTAP10-10P60014 251 aa5.57□□□□□ -1.52
GABPB1-201ENST00000220429 LCE3AQ5TA76 89 aa5.45□□□□□ -1.54
GABPB1-201ENST00000220429 KRTAP19-8Q3LI54 63 aa5.44□□□□□ -1.54
GABPB1-201ENST00000220429 MT1BP07438 61 aa5.39□□□□□ -1.55
GABPB1-201ENST00000220429 LCE2AQ5TA79 106 aaPredicted RBP5.38□□□□□ -1.55
GABPB1-201ENST00000220429 KRTAP9-3Q9BYQ3 159 aa5.37□□□□□ -1.55
GABPB1-201ENST00000220429 KRTAP10-5P60370 271 aa5.31□□□□□ -1.56
GABPB1-201ENST00000220429 MT1XP80297 61 aa5.31□□□□□ -1.56
GABPB1-201ENST00000220429 KRTAP8-1Q8IUC2 63 aa5.29□□□□□ -1.56
GABPB1-201ENST00000220429 KRTAP10-12P60413 245 aa5.27□□□□□ -1.57
GABPB1-201ENST00000220429 USH2AO75445 5202 aa5.18□□□□□ -1.58
GABPB1-201ENST00000220429 KRTAP12-3P60328 96 aa5.15□□□□□ -1.59
GABPB1-201ENST00000220429 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
GABPB1-201ENST00000220429 KMT2DO14686 5537 aa5.02□□□□□ -1.61
GABPB1-201ENST00000220429 KRTAP2-3P0C7H8 128 aa4.91□□□□□ -1.62
GABPB1-201ENST00000220429 KRTAP2-4Q9BYR9 128 aa4.91□□□□□ -1.62
GABPB1-201ENST00000220429 KRTAP2-1Q9BYU5 128 aa4.91□□□□□ -1.62
GABPB1-201ENST00000220429 SSPOA2VEC9 5147 aa4.91□□□□□ -1.62
GABPB1-201ENST00000220429 LCE3CQ5T5A8 94 aa4.89□□□□□ -1.63
GABPB1-201ENST00000220429 KRTAP19-5Q3LI72 72 aa4.88□□□□□ -1.63
GABPB1-201ENST00000220429 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
GABPB1-201ENST00000220429 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
GABPB1-201ENST00000220429 FSIP2Q5CZC0 6907 aa4.82□□□□□ -1.64
GABPB1-201ENST00000220429 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
GABPB1-201ENST00000220429 KRTAP19-7Q3SYF9 63 aa4.73□□□□□ -1.65
GABPB1-201ENST00000220429 KRTAP19-6Q3LI70 58 aa4.7□□□□□ -1.66
GABPB1-201ENST00000220429 MT1EP04732 61 aa4.6□□□□□ -1.67
GABPB1-201ENST00000220429 KRTAP9-2Q9BYQ4 174 aa4.6□□□□□ -1.67
GABPB1-201ENST00000220429 FCGBPQ9Y6R7 5405 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms