RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 HSPG2P98160 4391 aa5.18□□□□□ -1.58
TUBB1-201ENST00000217133 COX6B2Q6YFQ2 88 aa5.18□□□□□ -1.58
TUBB1-201ENST00000217133 RYR1P21817 5038 aa5.17□□□□□ -1.58
TUBB1-201ENST00000217133 DMBT1Q9UGM3 2413 aaPredicted RBP5.14□□□□□ -1.59
TUBB1-201ENST00000217133 MYCBP2O75592 4640 aa5.13□□□□□ -1.59
TUBB1-201ENST00000217133 LRP1Q07954 4544 aaKnown RBP5.13□□□□□ -1.59
TUBB1-201ENST00000217133 A0A0D9SG42 100 aa5.12□□□□□ -1.59
TUBB1-201ENST00000217133 RPL37P61927 97 aaKnown RBP5.11□□□□□ -1.59
TUBB1-201ENST00000217133 LCE2DQ5TA82 110 aaPredicted RBP5.11□□□□□ -1.59
TUBB1-201ENST00000217133 Q5VSD8 79 aa5.1□□□□□ -1.59
TUBB1-201ENST00000217133 SPINT4Q6UDR6 99 aa5.1□□□□□ -1.59
TUBB1-201ENST00000217133 A0A0A0MQY5 61 aa5.09□□□□□ -1.6
TUBB1-201ENST00000217133 KRTAP4-5Q9BYR2 181 aa5.08□□□□□ -1.6
TUBB1-201ENST00000217133 KRTAP10-4P60372 401 aaPredicted RBP5.08□□□□□ -1.6
TUBB1-201ENST00000217133 KRTAP3-3Q9BYR6 98 aa5.06□□□□□ -1.6
TUBB1-201ENST00000217133 KRTAP3-2Q9BYR7 98 aa5.06□□□□□ -1.6
TUBB1-201ENST00000217133 P0C880 135 aa5.04□□□□□ -1.6
TUBB1-201ENST00000217133 BIRC6Q9NR09 4857 aa5.04□□□□□ -1.6
TUBB1-201ENST00000217133 ABCA13Q86UQ4 5058 aa5.04□□□□□ -1.6
TUBB1-201ENST00000217133 KRTAP10-6P60371 365 aaPredicted RBP5□□□□□ -1.61
TUBB1-201ENST00000217133 KRTAP13-4Q3LI77 160 aa5□□□□□ -1.61
TUBB1-201ENST00000217133 HERC2O95714 4834 aa5□□□□□ -1.61
TUBB1-201ENST00000217133 TPRXLQ17RH7 258 aa4.99□□□□□ -1.61
TUBB1-201ENST00000217133 C10orf95Q9H7T3 257 aa4.99□□□□□ -1.61
TUBB1-201ENST00000217133 PKHD1L1Q86WI1 4243 aa4.98□□□□□ -1.61
TUBB1-201ENST00000217133 S4R3F8 94 aa4.98□□□□□ -1.61
TUBB1-201ENST00000217133 PCLOQ9Y6V0 5065 aa4.97□□□□□ -1.61
TUBB1-201ENST00000217133 FAT3Q8TDW7 4589 aa4.95□□□□□ -1.62
TUBB1-201ENST00000217133 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
TUBB1-201ENST00000217133 TNXBP22105 4242 aa4.89□□□□□ -1.63
TUBB1-201ENST00000217133 KRTAP10-8P60410 259 aa4.88□□□□□ -1.63
TUBB1-201ENST00000217133 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
TUBB1-201ENST00000217133 HERC1Q15751 4861 aa4.87□□□□□ -1.63
TUBB1-201ENST00000217133 MT1HL1P0DM35 61 aa4.86□□□□□ -1.63
TUBB1-201ENST00000217133 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
TUBB1-201ENST00000217133 XP32Q5T750 250 aa4.83□□□□□ -1.64
TUBB1-201ENST00000217133 KRTAP12-1P59990 96 aa4.82□□□□□ -1.64
TUBB1-201ENST00000217133 J3QL48 77 aa4.81□□□□□ -1.64
TUBB1-201ENST00000217133 LPAP08519 4548 aa4.79□□□□□ -1.64
TUBB1-201ENST00000217133 M0QZ58 72 aa4.77□□□□□ -1.65
TUBB1-201ENST00000217133 LRP2P98164 4655 aa4.75□□□□□ -1.65
TUBB1-201ENST00000217133 R4GN34 69 aa4.68□□□□□ -1.66
TUBB1-201ENST00000217133 MUC2Q02817 5179 aa4.68□□□□□ -1.66
TUBB1-201ENST00000217133 HMCN2Q8NDA2 5059 aa4.63□□□□□ -1.67
TUBB1-201ENST00000217133 UBR4Q5T4S7 5183 aa4.62□□□□□ -1.67
TUBB1-201ENST00000217133 RNF213Q63HN8 5207 aa4.61□□□□□ -1.67
TUBB1-201ENST00000217133 PLAC4Q8WY50 150 aa4.61□□□□□ -1.67
TUBB1-201ENST00000217133 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
TUBB1-201ENST00000217133 CAMK2N1Q7Z7J9 78 aa4.51□□□□□ -1.69
TUBB1-201ENST00000217133 LORP23490 312 aaPredicted RBP4.48□□□□□ -1.69
TUBB1-201ENST00000217133 FAT4Q6V0I7 4981 aa4.47□□□□□ -1.69
TUBB1-201ENST00000217133 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
TUBB1-201ENST00000217133 KRTAP4-1Q9BYQ7 146 aa4.45□□□□□ -1.7
TUBB1-201ENST00000217133 SEC61BP60468 96 aaKnown RBP4.43□□□□□ -1.7
TUBB1-201ENST00000217133 MUC17Q685J3 4493 aa4.36□□□□□ -1.71
TUBB1-201ENST00000217133 TNP1P09430 55 aa4.31□□□□□ -1.72
TUBB1-201ENST00000217133 LCE2BO14633 110 aa4.28□□□□□ -1.72
TUBB1-201ENST00000217133 KRTAP19-2Q3LHN2 52 aa4.22□□□□□ -1.73
TUBB1-201ENST00000217133 LCE2CQ5TA81 110 aa4.18□□□□□ -1.74
TUBB1-201ENST00000217133 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
TUBB1-201ENST00000217133 M0R2T5 61 aa4.15□□□□□ -1.75
TUBB1-201ENST00000217133 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
TUBB1-201ENST00000217133 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
TUBB1-201ENST00000217133 MT1HP80294 61 aa4.11□□□□□ -1.75
TUBB1-201ENST00000217133 LCE2AQ5TA79 106 aaPredicted RBP4.11□□□□□ -1.75
TUBB1-201ENST00000217133 FSIP2Q5CZC0 6907 aa4.05□□□□□ -1.76
TUBB1-201ENST00000217133 LCE3AQ5TA76 89 aa4.01□□□□□ -1.77
TUBB1-201ENST00000217133 SPRR2GQ9BYE4 73 aa3.97□□□□□ -1.77
TUBB1-201ENST00000217133 PRO2289Q9P1D8 64 aa3.96□□□□□ -1.78
TUBB1-201ENST00000217133 USH2AO75445 5202 aa3.95□□□□□ -1.78
TUBB1-201ENST00000217133 KRTAP10-10P60014 251 aa3.94□□□□□ -1.78
TUBB1-201ENST00000217133 KRTAP19-1Q8IUB9 90 aa3.94□□□□□ -1.78
TUBB1-201ENST00000217133 KRTAP9-8Q9BYQ0 159 aa3.94□□□□□ -1.78
TUBB1-201ENST00000217133 MT1FP04733 61 aa3.93□□□□□ -1.78
TUBB1-201ENST00000217133 MT2AP02795 61 aa3.93□□□□□ -1.78
TUBB1-201ENST00000217133 INE1O15225 51 aa3.89□□□□□ -1.79
TUBB1-201ENST00000217133 KRTAP8-1Q8IUC2 63 aa3.86□□□□□ -1.79
TUBB1-201ENST00000217133 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
TUBB1-201ENST00000217133 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
TUBB1-201ENST00000217133 KRTAP9-3Q9BYQ3 159 aa3.79□□□□□ -1.8
TUBB1-201ENST00000217133 KRTAP10-5P60370 271 aa3.74□□□□□ -1.81
TUBB1-201ENST00000217133 KRTAP19-8Q3LI54 63 aa3.74□□□□□ -1.81
TUBB1-201ENST00000217133 MT1XP80297 61 aa3.73□□□□□ -1.81
TUBB1-201ENST00000217133 MT1BP07438 61 aa3.71□□□□□ -1.82
TUBB1-201ENST00000217133 SSPOA2VEC9 5147 aa3.69□□□□□ -1.82
TUBB1-201ENST00000217133 KRTAP10-7P60409 375 aaPredicted RBP3.68□□□□□ -1.82
TUBB1-201ENST00000217133 KRTAP9-2Q9BYQ4 174 aa3.6□□□□□ -1.83
TUBB1-201ENST00000217133 KMT2DO14686 5537 aa3.59□□□□□ -1.83
TUBB1-201ENST00000217133 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
TUBB1-201ENST00000217133 KRTAP19-5Q3LI72 72 aa3.57□□□□□ -1.84
TUBB1-201ENST00000217133 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
TUBB1-201ENST00000217133 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.86
TUBB1-201ENST00000217133 SYNE2Q8WXH0 6885 aaKnown RBP3.46□□□□□ -1.86
TUBB1-201ENST00000217133 CRCT1Q9UGL9 99 aa3.44□□□□□ -1.86
TUBB1-201ENST00000217133 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
TUBB1-201ENST00000217133 KRTAP19-6Q3LI70 58 aa3.43□□□□□ -1.86
TUBB1-201ENST00000217133 KRTAP4-8A0A0G2JLE6 195 aa3.42□□□□□ -1.86
TUBB1-201ENST00000217133 KRTAP4-8Q9BYQ9 185 aa3.42□□□□□ -1.86
TUBB1-201ENST00000217133 KRTAP19-4Q3LI73 84 aa3.39□□□□□ -1.87
TUBB1-201ENST00000217133 KRTAP4-7Q9BYR0 210 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms