RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 ABCA13Q86UQ4 5058 aa4.15□□□□□ -1.75
HMGXB4-201ENST00000216106 LPAP08519 4548 aa4.14□□□□□ -1.75
HMGXB4-201ENST00000216106 PMAIP1Q13794 54 aa4.14□□□□□ -1.75
HMGXB4-201ENST00000216106 LRP2P98164 4655 aa4.13□□□□□ -1.75
HMGXB4-201ENST00000216106 SEC61GP60059 68 aa4.12□□□□□ -1.75
HMGXB4-201ENST00000216106 UQCR11O14957 56 aa4.11□□□□□ -1.75
HMGXB4-201ENST00000216106 TPRXLQ17RH7 258 aa4.1□□□□□ -1.75
HMGXB4-201ENST00000216106 MIR22HGQ0VDD5 57 aa4.1□□□□□ -1.75
HMGXB4-201ENST00000216106 SPATA8Q6RVD6 105 aa4.09□□□□□ -1.76
HMGXB4-201ENST00000216106 A6NN06 94 aa4.07□□□□□ -1.76
HMGXB4-201ENST00000216106 HERC2O95714 4834 aa4.04□□□□□ -1.76
HMGXB4-201ENST00000216106 S4R3F8 94 aa4.04□□□□□ -1.76
HMGXB4-201ENST00000216106 A0A1B0GU33 70 aa4.02□□□□□ -1.77
HMGXB4-201ENST00000216106 H0YAA0 97 aa4.02□□□□□ -1.77
HMGXB4-201ENST00000216106 H1FX-AS1Q4G0G2 97 aa4.01□□□□□ -1.77
HMGXB4-201ENST00000216106 KTN1-AS1Q86SY8 53 aa4.01□□□□□ -1.77
HMGXB4-201ENST00000216106 RBM12B-AS1Q9P1G2 102 aa3.98□□□□□ -1.77
HMGXB4-201ENST00000216106 BIRC6Q9NR09 4857 aa3.98□□□□□ -1.77
HMGXB4-201ENST00000216106 KRTAP10-6P60371 365 aaPredicted RBP3.96□□□□□ -1.78
HMGXB4-201ENST00000216106 SEC61BP60468 96 aaKnown RBP3.94□□□□□ -1.78
HMGXB4-201ENST00000216106 MUC17Q685J3 4493 aa3.94□□□□□ -1.78
HMGXB4-201ENST00000216106 P0C880 135 aa3.92□□□□□ -1.78
HMGXB4-201ENST00000216106 KRTAP13-4Q3LI77 160 aa3.92□□□□□ -1.78
HMGXB4-201ENST00000216106 ADM2Q7Z4H4 148 aa3.91□□□□□ -1.78
HMGXB4-201ENST00000216106 KRTAP4-1Q9BYQ7 146 aa3.91□□□□□ -1.78
HMGXB4-201ENST00000216106 CSAG1Q6PB30 78 aa3.9□□□□□ -1.79
HMGXB4-201ENST00000216106 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
HMGXB4-201ENST00000216106 PCLOQ9Y6V0 5065 aa3.88□□□□□ -1.79
HMGXB4-201ENST00000216106 MUC2Q02817 5179 aa3.88□□□□□ -1.79
HMGXB4-201ENST00000216106 A0A0D9SG42 100 aa3.88□□□□□ -1.79
HMGXB4-201ENST00000216106 HERC1Q15751 4861 aa3.88□□□□□ -1.79
HMGXB4-201ENST00000216106 K7ERS5 55 aa3.85□□□□□ -1.79
HMGXB4-201ENST00000216106 KRTAP19-2Q3LHN2 52 aa3.81□□□□□ -1.8
HMGXB4-201ENST00000216106 HMCN2Q8NDA2 5059 aa3.8□□□□□ -1.8
HMGXB4-201ENST00000216106 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
HMGXB4-201ENST00000216106 M0QZ58 72 aa3.77□□□□□ -1.81
HMGXB4-201ENST00000216106 SPINT4Q6UDR6 99 aa3.75□□□□□ -1.81
HMGXB4-201ENST00000216106 KRTAP12-1P59990 96 aa3.75□□□□□ -1.81
HMGXB4-201ENST00000216106 R4GN34 69 aa3.74□□□□□ -1.81
HMGXB4-201ENST00000216106 FLGP20930 4061 aaPredicted RBP3.74□□□□□ -1.81
HMGXB4-201ENST00000216106 LORP23490 312 aaPredicted RBP3.73□□□□□ -1.81
HMGXB4-201ENST00000216106 ROMO1P60602 79 aa3.73□□□□□ -1.81
HMGXB4-201ENST00000216106 LINC01554Q52M75 96 aa3.73□□□□□ -1.81
HMGXB4-201ENST00000216106 CRIPTQ9P021 101 aa3.73□□□□□ -1.81
HMGXB4-201ENST00000216106 H3BS24 57 aa3.71□□□□□ -1.82
HMGXB4-201ENST00000216106 KRTAP25-1Q3LHN0 102 aa3.7□□□□□ -1.82
HMGXB4-201ENST00000216106 FAT4Q6V0I7 4981 aa3.69□□□□□ -1.82
HMGXB4-201ENST00000216106 UBR4Q5T4S7 5183 aa3.66□□□□□ -1.82
HMGXB4-201ENST00000216106 RNF213Q63HN8 5207 aa3.66□□□□□ -1.82
HMGXB4-201ENST00000216106 LCE2BO14633 110 aa3.65□□□□□ -1.83
HMGXB4-201ENST00000216106 LCE2CQ5TA81 110 aa3.64□□□□□ -1.83
HMGXB4-201ENST00000216106 C10orf95Q9H7T3 257 aa3.62□□□□□ -1.83
HMGXB4-201ENST00000216106 M0R2T5 61 aa3.58□□□□□ -1.84
HMGXB4-201ENST00000216106 MT1HP80294 61 aa3.56□□□□□ -1.84
HMGXB4-201ENST00000216106 CAMK2N1Q7Z7J9 78 aa3.53□□□□□ -1.84
HMGXB4-201ENST00000216106 SPRR2GQ9BYE4 73 aa3.47□□□□□ -1.85
HMGXB4-201ENST00000216106 MT1FP04733 61 aa3.47□□□□□ -1.85
HMGXB4-201ENST00000216106 KRTAP19-1Q8IUB9 90 aa3.47□□□□□ -1.85
HMGXB4-201ENST00000216106 MT2AP02795 61 aa3.47□□□□□ -1.85
HMGXB4-201ENST00000216106 KRTAP10-10P60014 251 aa3.46□□□□□ -1.86
HMGXB4-201ENST00000216106 KRTAP9-8Q9BYQ0 159 aa3.46□□□□□ -1.86
HMGXB4-201ENST00000216106 PLAC4Q8WY50 150 aa3.41□□□□□ -1.86
HMGXB4-201ENST00000216106 TNP1P09430 55 aa3.37□□□□□ -1.87
HMGXB4-201ENST00000216106 PP632Q6XCG6 107 aa3.35□□□□□ -1.87
HMGXB4-201ENST00000216106 LCE2AQ5TA79 106 aaPredicted RBP3.34□□□□□ -1.87
HMGXB4-201ENST00000216106 KRTAP19-8Q3LI54 63 aa3.33□□□□□ -1.88
HMGXB4-201ENST00000216106 KRTAP15-1Q3LI76 137 aa3.33□□□□□ -1.88
HMGXB4-201ENST00000216106 MT1BP07438 61 aa3.31□□□□□ -1.88
HMGXB4-201ENST00000216106 KRTAP9-3Q9BYQ3 159 aa3.31□□□□□ -1.88
HMGXB4-201ENST00000216106 KRTAP23-1A1A580 65 aa3.26□□□□□ -1.89
HMGXB4-201ENST00000216106 KRTAP10-5P60370 271 aa3.26□□□□□ -1.89
HMGXB4-201ENST00000216106 MT1XP80297 61 aa3.26□□□□□ -1.89
HMGXB4-201ENST00000216106 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
HMGXB4-201ENST00000216106 USH2AO75445 5202 aa3.21□□□□□ -1.9
HMGXB4-201ENST00000216106 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
HMGXB4-201ENST00000216106 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
HMGXB4-201ENST00000216106 PRO2289Q9P1D8 64 aa3.16□□□□□ -1.9
HMGXB4-201ENST00000216106 KRTAP10-12P60413 245 aa3.15□□□□□ -1.9
HMGXB4-201ENST00000216106 KRTAP8-1Q8IUC2 63 aa3.12□□□□□ -1.91
HMGXB4-201ENST00000216106 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
HMGXB4-201ENST00000216106 KMT2DO14686 5537 aa3.08□□□□□ -1.92
HMGXB4-201ENST00000216106 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
HMGXB4-201ENST00000216106 SPRR5A0A1B0GTR4 108 aa3.06□□□□□ -1.92
HMGXB4-201ENST00000216106 KRTAP4-8A0A0G2JLE6 195 aa3.01□□□□□ -1.93
HMGXB4-201ENST00000216106 KRTAP4-8Q9BYQ9 185 aa3.01□□□□□ -1.93
HMGXB4-201ENST00000216106 SSPOA2VEC9 5147 aa3□□□□□ -1.93
HMGXB4-201ENST00000216106 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
HMGXB4-201ENST00000216106 FSIP2Q5CZC0 6907 aa2.98□□□□□ -1.93
HMGXB4-201ENST00000216106 A0A0A0MQY5 61 aa2.94□□□□□ -1.94
HMGXB4-201ENST00000216106 KRTAP19-6Q3LI70 58 aa2.92□□□□□ -1.94
HMGXB4-201ENST00000216106 KRTAP19-7Q3SYF9 63 aa2.9□□□□□ -1.94
HMGXB4-201ENST00000216106 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
HMGXB4-201ENST00000216106 MT1EP04732 61 aa2.83□□□□□ -1.96
HMGXB4-201ENST00000216106 FCGBPQ9Y6R7 5405 aaPredicted RBP2.82□□□□□ -1.96
HMGXB4-201ENST00000216106 KRTAP4-7Q9BYR0 210 aa2.81□□□□□ -1.96
HMGXB4-201ENST00000216106 MT1LQ93083 61 aa2.81□□□□□ -1.96
HMGXB4-201ENST00000216106 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
HMGXB4-201ENST00000216106 MUC12Q9UKN1 5478 aa2.75□□□□□ -1.97
HMGXB4-201ENST00000216106 LOC100996750A0A140TA64 210 aa2.73□□□□□ -1.97
HMGXB4-201ENST00000216106 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms