RNA–Protein interactions for RNA: ENST00000216044.9

GTPBP1-201, Transcript of GTP binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTPBP1, Length 5,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP1-201ENST00000216044 DNAH11Q96DT5 4516 aa7.49□□□□□ -1.21
GTPBP1-201ENST00000216044 MT1HL1P0DM35 61 aa7.45□□□□□ -1.22
GTPBP1-201ENST00000216044 KRTAP10-10P60014 251 aa7.45□□□□□ -1.22
GTPBP1-201ENST00000216044 KMT2AQ03164 3969 aa7.44□□□□□ -1.22
GTPBP1-201ENST00000216044 DNAH2Q9P225 4427 aa7.41□□□□□ -1.22
GTPBP1-201ENST00000216044 DNAH7Q8WXX0 4024 aa7.4□□□□□ -1.22
GTPBP1-201ENST00000216044 DNAH6Q9C0G6 4158 aa7.38□□□□□ -1.23
GTPBP1-201ENST00000216044 DYNC1H1Q14204 4646 aaKnown RBP7.38□□□□□ -1.23
GTPBP1-201ENST00000216044 KRTAP4-5Q9BYR2 181 aa7.38□□□□□ -1.23
GTPBP1-201ENST00000216044 LRP1BQ9NZR2 4599 aa7.36□□□□□ -1.23
GTPBP1-201ENST00000216044 LYSTQ99698 3801 aa7.3□□□□□ -1.24
GTPBP1-201ENST00000216044 FAT2Q9NYQ8 4349 aa7.25□□□□□ -1.25
GTPBP1-201ENST00000216044 SACSQ9NZJ4 4579 aa7.24□□□□□ -1.25
GTPBP1-201ENST00000216044 DNAH8Q96JB1 4490 aa7.21□□□□□ -1.25
GTPBP1-201ENST00000216044 FAT1Q14517 4588 aa7.21□□□□□ -1.26
GTPBP1-201ENST00000216044 KRTAP13-4Q3LI77 160 aa7.2□□□□□ -1.26
GTPBP1-201ENST00000216044 RYR2Q92736 4967 aa7.17□□□□□ -1.26
GTPBP1-201ENST00000216044 HECTD4Q9Y4D8 3996 aa7.16□□□□□ -1.26
GTPBP1-201ENST00000216044 HYDINQ4G0P3 5121 aa7.14□□□□□ -1.27
GTPBP1-201ENST00000216044 KRTAP3-1Q9BYR8 98 aa7.13□□□□□ -1.27
GTPBP1-201ENST00000216044 KRTAP12-2P59991 146 aa7.09□□□□□ -1.27
GTPBP1-201ENST00000216044 VPS13BQ7Z7G8 4022 aa7.07□□□□□ -1.28
GTPBP1-201ENST00000216044 APOBP04114 4563 aaKnown RBP7.02□□□□□ -1.29
GTPBP1-201ENST00000216044 RYR3Q15413 4870 aa7.01□□□□□ -1.29
GTPBP1-201ENST00000216044 KIAA1109Q2LD37 5005 aa6.99□□□□□ -1.29
GTPBP1-201ENST00000216044 RYR1P21817 5038 aa6.98□□□□□ -1.29
GTPBP1-201ENST00000216044 INE1O15225 51 aa6.98□□□□□ -1.29
GTPBP1-201ENST00000216044 KRTAP12-1P59990 96 aa6.96□□□□□ -1.3
GTPBP1-201ENST00000216044 FRAS1Q86XX4 4008 aa6.96□□□□□ -1.3
GTPBP1-201ENST00000216044 KRTAP15-1Q3LI76 137 aa6.95□□□□□ -1.3
GTPBP1-201ENST00000216044 KRTAP17-1Q9BYP8 105 aa6.93□□□□□ -1.3
GTPBP1-201ENST00000216044 PKD1P98161 4303 aa6.92□□□□□ -1.3
GTPBP1-201ENST00000216044 PKHD1P08F94 4074 aa6.9□□□□□ -1.3
GTPBP1-201ENST00000216044 KMT2CQ8NEZ4 4911 aaKnown RBP6.88□□□□□ -1.31
GTPBP1-201ENST00000216044 HSPG2P98160 4391 aa6.81□□□□□ -1.32
GTPBP1-201ENST00000216044 KRTAP3-3Q9BYR6 98 aa6.78□□□□□ -1.32
GTPBP1-201ENST00000216044 LRP1Q07954 4544 aaKnown RBP6.76□□□□□ -1.33
GTPBP1-201ENST00000216044 KRTAP10-6P60371 365 aaPredicted RBP6.74□□□□□ -1.33
GTPBP1-201ENST00000216044 BIRC6Q9NR09 4857 aa6.74□□□□□ -1.33
GTPBP1-201ENST00000216044 KRTAP4-1Q9BYQ7 146 aa6.65□□□□□ -1.34
GTPBP1-201ENST00000216044 KRTAP3-2Q9BYR7 98 aa6.64□□□□□ -1.35
GTPBP1-201ENST00000216044 FAT3Q8TDW7 4589 aa6.64□□□□□ -1.35
GTPBP1-201ENST00000216044 HERC2O95714 4834 aa6.64□□□□□ -1.35
GTPBP1-201ENST00000216044 MYCBP2O75592 4640 aa6.61□□□□□ -1.35
GTPBP1-201ENST00000216044 EPPK1P58107 5090 aaKnown RBP6.58□□□□□ -1.36
GTPBP1-201ENST00000216044 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
GTPBP1-201ENST00000216044 KRTAP10-12P60413 245 aa6.52□□□□□ -1.37
GTPBP1-201ENST00000216044 PKHD1L1Q86WI1 4243 aa6.5□□□□□ -1.37
GTPBP1-201ENST00000216044 TNXBP22105 4242 aa6.47□□□□□ -1.37
GTPBP1-201ENST00000216044 ABCA13Q86UQ4 5058 aa6.38□□□□□ -1.39
GTPBP1-201ENST00000216044 MT1HP80294 61 aa6.37□□□□□ -1.39
GTPBP1-201ENST00000216044 LORP23490 312 aaPredicted RBP6.36□□□□□ -1.39
GTPBP1-201ENST00000216044 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
GTPBP1-201ENST00000216044 LRP2P98164 4655 aa6.32□□□□□ -1.4
GTPBP1-201ENST00000216044 CRCT1Q9UGL9 99 aa6.31□□□□□ -1.4
GTPBP1-201ENST00000216044 HERC1Q15751 4861 aa6.28□□□□□ -1.4
GTPBP1-201ENST00000216044 LPAP08519 4548 aa6.25□□□□□ -1.41
GTPBP1-201ENST00000216044 PCLOQ9Y6V0 5065 aa6.19□□□□□ -1.42
GTPBP1-201ENST00000216044 MT2AP02795 61 aa6.19□□□□□ -1.42
GTPBP1-201ENST00000216044 MT1FP04733 61 aa6.1□□□□□ -1.43
GTPBP1-201ENST00000216044 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
GTPBP1-201ENST00000216044 SPRR2GQ9BYE4 73 aa6.09□□□□□ -1.44
GTPBP1-201ENST00000216044 LCE2CQ5TA81 110 aa6.06□□□□□ -1.44
GTPBP1-201ENST00000216044 KRTAP10-5P60370 271 aa6.05□□□□□ -1.44
GTPBP1-201ENST00000216044 MUC17Q685J3 4493 aa5.98□□□□□ -1.45
GTPBP1-201ENST00000216044 KRTAP19-2Q3LHN2 52 aa5.98□□□□□ -1.45
GTPBP1-201ENST00000216044 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.45
GTPBP1-201ENST00000216044 HMCN2Q8NDA2 5059 aa5.91□□□□□ -1.46
GTPBP1-201ENST00000216044 KRTAP9-8Q9BYQ0 159 aa5.89□□□□□ -1.47
GTPBP1-201ENST00000216044 KRTAP19-1Q8IUB9 90 aa5.88□□□□□ -1.47
GTPBP1-201ENST00000216044 FLGP20930 4061 aaPredicted RBP5.85□□□□□ -1.47
GTPBP1-201ENST00000216044 RNF213Q63HN8 5207 aa5.83□□□□□ -1.48
GTPBP1-201ENST00000216044 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
GTPBP1-201ENST00000216044 KRTAP19-8Q3LI54 63 aa5.81□□□□□ -1.48
GTPBP1-201ENST00000216044 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
GTPBP1-201ENST00000216044 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
GTPBP1-201ENST00000216044 UBR4Q5T4S7 5183 aa5.67□□□□□ -1.5
GTPBP1-201ENST00000216044 MT1BP07438 61 aa5.67□□□□□ -1.5
GTPBP1-201ENST00000216044 KRTAP10-7P60409 375 aaPredicted RBP5.63□□□□□ -1.51
GTPBP1-201ENST00000216044 MUC2Q02817 5179 aa5.6□□□□□ -1.51
GTPBP1-201ENST00000216044 MT1XP80297 61 aa5.58□□□□□ -1.52
GTPBP1-201ENST00000216044 LCE2AQ5TA79 106 aaPredicted RBP5.57□□□□□ -1.52
GTPBP1-201ENST00000216044 LCE2BO14633 110 aa5.51□□□□□ -1.53
GTPBP1-201ENST00000216044 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
GTPBP1-201ENST00000216044 KRTAP19-5Q3LI72 72 aa5.42□□□□□ -1.54
GTPBP1-201ENST00000216044 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
GTPBP1-201ENST00000216044 LCE2DQ5TA82 110 aaPredicted RBP5.25□□□□□ -1.57
GTPBP1-201ENST00000216044 KRTAP4-8A0A0G2JLE6 195 aa5.24□□□□□ -1.57
GTPBP1-201ENST00000216044 KRTAP9-2Q9BYQ4 174 aa5.24□□□□□ -1.57
GTPBP1-201ENST00000216044 KRTAP4-8Q9BYQ9 185 aa5.24□□□□□ -1.57
GTPBP1-201ENST00000216044 KRTAP19-6Q3LI70 58 aa5.23□□□□□ -1.57
GTPBP1-201ENST00000216044 KRTAP9-6A0A140TA67 174 aa5.17□□□□□ -1.58
GTPBP1-201ENST00000216044 SPRR2EP22531 72 aa5.15□□□□□ -1.58
GTPBP1-201ENST00000216044 SPRR2BP35325 72 aa5.15□□□□□ -1.58
GTPBP1-201ENST00000216044 SPRR2AP35326 72 aa5.15□□□□□ -1.58
GTPBP1-201ENST00000216044 FSIP2Q5CZC0 6907 aa5.14□□□□□ -1.59
GTPBP1-201ENST00000216044 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
GTPBP1-201ENST00000216044 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
GTPBP1-201ENST00000216044 SPRR2DP22532 72 aa5.01□□□□□ -1.61
GTPBP1-201ENST00000216044 MT1GP13640 62 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms