RNA–Protein interactions for RNA: ENST00000202028.9

EPB41L1-201, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 1 (best) BASIC

Gene EPB41L1, Length 3,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-201ENST00000202028 K7ERS5 55 aa4.52□□□□□ -1.69
EPB41L1-201ENST00000202028 KRTAP10-8P60410 259 aa4.51□□□□□ -1.69
EPB41L1-201ENST00000202028 A0A0D9SG42 100 aa4.51□□□□□ -1.69
EPB41L1-201ENST00000202028 A8MUU9 505 aa4.51□□□□□ -1.69
EPB41L1-201ENST00000202028 FAT1Q14517 4588 aa4.51□□□□□ -1.69
EPB41L1-201ENST00000202028 KRTAP3-1Q9BYR8 98 aa4.51□□□□□ -1.69
EPB41L1-201ENST00000202028 H1FX-AS1Q4G0G2 97 aa4.5□□□□□ -1.69
EPB41L1-201ENST00000202028 C20orf166-AS1Q96NR2 134 aa4.5□□□□□ -1.69
EPB41L1-201ENST00000202028 TNXBP22105 4242 aa4.5□□□□□ -1.69
EPB41L1-201ENST00000202028 FAT3Q8TDW7 4589 aa4.49□□□□□ -1.69
EPB41L1-201ENST00000202028 ROMO1P60602 79 aa4.48□□□□□ -1.69
EPB41L1-201ENST00000202028 EPPK1P58107 5090 aaKnown RBP4.48□□□□□ -1.69
EPB41L1-201ENST00000202028 KRTAP17-1Q9BYP8 105 aa4.48□□□□□ -1.69
EPB41L1-201ENST00000202028 COX6B2Q6YFQ2 88 aa4.47□□□□□ -1.69
EPB41L1-201ENST00000202028 BIRC6Q9NR09 4857 aa4.46□□□□□ -1.7
EPB41L1-201ENST00000202028 SPINT4Q6UDR6 99 aa4.43□□□□□ -1.7
EPB41L1-201ENST00000202028 MT1HL1P0DM35 61 aa4.43□□□□□ -1.7
EPB41L1-201ENST00000202028 KIAA1109Q2LD37 5005 aa4.42□□□□□ -1.7
EPB41L1-201ENST00000202028 HERC2O95714 4834 aa4.41□□□□□ -1.7
EPB41L1-201ENST00000202028 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
EPB41L1-201ENST00000202028 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
EPB41L1-201ENST00000202028 S4R3F8 94 aa4.37□□□□□ -1.71
EPB41L1-201ENST00000202028 RPL37P61927 97 aaKnown RBP4.35□□□□□ -1.71
EPB41L1-201ENST00000202028 MYCBP2O75592 4640 aa4.34□□□□□ -1.71
EPB41L1-201ENST00000202028 LRP1Q07954 4544 aaKnown RBP4.33□□□□□ -1.72
EPB41L1-201ENST00000202028 XP32Q5T750 250 aa4.32□□□□□ -1.72
EPB41L1-201ENST00000202028 P0C880 135 aa4.32□□□□□ -1.72
EPB41L1-201ENST00000202028 KRTAP13-4Q3LI77 160 aa4.32□□□□□ -1.72
EPB41L1-201ENST00000202028 KRTAP4-5Q9BYR2 181 aa4.31□□□□□ -1.72
EPB41L1-201ENST00000202028 C10orf95Q9H7T3 257 aa4.29□□□□□ -1.72
EPB41L1-201ENST00000202028 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
EPB41L1-201ENST00000202028 TPRXLQ17RH7 258 aa4.29□□□□□ -1.72
EPB41L1-201ENST00000202028 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
EPB41L1-201ENST00000202028 ABCA13Q86UQ4 5058 aa4.28□□□□□ -1.72
EPB41L1-201ENST00000202028 KRTAP12-2P59991 146 aa4.2□□□□□ -1.74
EPB41L1-201ENST00000202028 MUC17Q685J3 4493 aa4.2□□□□□ -1.74
EPB41L1-201ENST00000202028 SEC61BP60468 96 aaKnown RBP4.19□□□□□ -1.74
EPB41L1-201ENST00000202028 LCE2AQ5TA79 106 aaPredicted RBP4.17□□□□□ -1.74
EPB41L1-201ENST00000202028 M0QZ58 72 aa4.16□□□□□ -1.74
EPB41L1-201ENST00000202028 R4GN34 69 aa4.13□□□□□ -1.75
EPB41L1-201ENST00000202028 PCLOQ9Y6V0 5065 aa4.13□□□□□ -1.75
EPB41L1-201ENST00000202028 KRTAP12-1P59990 96 aa4.13□□□□□ -1.75
EPB41L1-201ENST00000202028 LRP2P98164 4655 aa4.11□□□□□ -1.75
EPB41L1-201ENST00000202028 LCE2CQ5TA81 110 aa4.11□□□□□ -1.75
EPB41L1-201ENST00000202028 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.76
EPB41L1-201ENST00000202028 LPAP08519 4548 aa4.09□□□□□ -1.76
EPB41L1-201ENST00000202028 LCE2BO14633 110 aa4.04□□□□□ -1.76
EPB41L1-201ENST00000202028 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
EPB41L1-201ENST00000202028 HERC1Q15751 4861 aa4.02□□□□□ -1.77
EPB41L1-201ENST00000202028 CAMK2N1Q7Z7J9 78 aa4□□□□□ -1.77
EPB41L1-201ENST00000202028 LORP23490 312 aaPredicted RBP3.99□□□□□ -1.77
EPB41L1-201ENST00000202028 KRTAP19-2Q3LHN2 52 aa3.97□□□□□ -1.77
EPB41L1-201ENST00000202028 KRTAP15-1Q3LI76 137 aa3.95□□□□□ -1.78
EPB41L1-201ENST00000202028 KRTAP4-1Q9BYQ7 146 aa3.94□□□□□ -1.78
EPB41L1-201ENST00000202028 PLAC4Q8WY50 150 aa3.88□□□□□ -1.79
EPB41L1-201ENST00000202028 FLGP20930 4061 aaPredicted RBP3.84□□□□□ -1.79
EPB41L1-201ENST00000202028 MUC2Q02817 5179 aa3.8□□□□□ -1.8
EPB41L1-201ENST00000202028 M0R2T5 61 aa3.78□□□□□ -1.8
EPB41L1-201ENST00000202028 RNF213Q63HN8 5207 aa3.76□□□□□ -1.81
EPB41L1-201ENST00000202028 TNP1P09430 55 aa3.74□□□□□ -1.81
EPB41L1-201ENST00000202028 PP632Q6XCG6 107 aa3.72□□□□□ -1.81
EPB41L1-201ENST00000202028 MT1HP80294 61 aa3.71□□□□□ -1.82
EPB41L1-201ENST00000202028 UBR4Q5T4S7 5183 aa3.69□□□□□ -1.82
EPB41L1-201ENST00000202028 FAT4Q6V0I7 4981 aa3.63□□□□□ -1.83
EPB41L1-201ENST00000202028 KRTAP10-10P60014 251 aa3.61□□□□□ -1.83
EPB41L1-201ENST00000202028 KRTAP9-8Q9BYQ0 159 aa3.6□□□□□ -1.83
EPB41L1-201ENST00000202028 SPRR2GQ9BYE4 73 aa3.57□□□□□ -1.84
EPB41L1-201ENST00000202028 MT2AP02795 61 aa3.56□□□□□ -1.84
EPB41L1-201ENST00000202028 MT1FP04733 61 aa3.52□□□□□ -1.85
EPB41L1-201ENST00000202028 LCE3AQ5TA76 89 aa3.52□□□□□ -1.85
EPB41L1-201ENST00000202028 KRTAP19-8Q3LI54 63 aa3.5□□□□□ -1.85
EPB41L1-201ENST00000202028 KRTAP19-1Q8IUB9 90 aa3.5□□□□□ -1.85
EPB41L1-201ENST00000202028 PRO2289Q9P1D8 64 aa3.5□□□□□ -1.85
EPB41L1-201ENST00000202028 KRTAP9-3Q9BYQ3 159 aa3.48□□□□□ -1.85
EPB41L1-201ENST00000202028 KRTAP9-2Q9BYQ4 174 aa3.45□□□□□ -1.86
EPB41L1-201ENST00000202028 FSIP2Q5CZC0 6907 aa3.41□□□□□ -1.86
EPB41L1-201ENST00000202028 LOC100996750A0A140TA64 210 aa3.39□□□□□ -1.87
EPB41L1-201ENST00000202028 KRTAP4-6Q9BYQ5 205 aa3.39□□□□□ -1.87
EPB41L1-201ENST00000202028 MT1BP07438 61 aa3.37□□□□□ -1.87
EPB41L1-201ENST00000202028 KRTAP9-6A0A140TA67 174 aa3.37□□□□□ -1.87
EPB41L1-201ENST00000202028 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
EPB41L1-201ENST00000202028 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
EPB41L1-201ENST00000202028 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
EPB41L1-201ENST00000202028 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
EPB41L1-201ENST00000202028 MT1XP80297 61 aa3.31□□□□□ -1.88
EPB41L1-201ENST00000202028 INE1O15225 51 aa3.3□□□□□ -1.88
EPB41L1-201ENST00000202028 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
EPB41L1-201ENST00000202028 KRTAP8-1Q8IUC2 63 aa3.29□□□□□ -1.88
EPB41L1-201ENST00000202028 CRCT1Q9UGL9 99 aa3.28□□□□□ -1.88
EPB41L1-201ENST00000202028 KRTAP19-6Q3LI70 58 aa3.23□□□□□ -1.89
EPB41L1-201ENST00000202028 USH2AO75445 5202 aa3.22□□□□□ -1.89
EPB41L1-201ENST00000202028 KRTAP19-5Q3LI72 72 aa3.18□□□□□ -1.9
EPB41L1-201ENST00000202028 KMT2DO14686 5537 aa3.17□□□□□ -1.9
EPB41L1-201ENST00000202028 KRTAP19-4Q3LI73 84 aa3.16□□□□□ -1.9
EPB41L1-201ENST00000202028 SSPOA2VEC9 5147 aa3.16□□□□□ -1.9
EPB41L1-201ENST00000202028 KRTAP4-8A0A0G2JLE6 195 aa3.14□□□□□ -1.91
EPB41L1-201ENST00000202028 KRTAP4-8Q9BYQ9 185 aa3.14□□□□□ -1.91
EPB41L1-201ENST00000202028 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
EPB41L1-201ENST00000202028 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.06□□□□□ -1.92
EPB41L1-201ENST00000202028 KRTAP4-7Q9BYR0 210 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms