RNA–Protein interactions for RNA: ENST00000182527.3

TRAM2-201, Transcript of translocation associated membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM2, Length 6,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM2-201ENST00000182527 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
TRAM2-201ENST00000182527 HUWE1Q7Z6Z7 4374 aaKnown RBP3.41□□□□□ -1.86
TRAM2-201ENST00000182527 TGP01266 2768 aa3.4□□□□□ -1.86
TRAM2-201ENST00000182527 ANK3Q12955 4377 aaKnown RBP3.39□□□□□ -1.87
TRAM2-201ENST00000182527 MEGF8Q7Z7M0 2845 aa3.39□□□□□ -1.87
TRAM2-201ENST00000182527 INE1O15225 51 aa3.38□□□□□ -1.87
TRAM2-201ENST00000182527 CSMD3Q7Z407 3707 aa3.37□□□□□ -1.87
TRAM2-201ENST00000182527 MT1HP80294 61 aa3.37□□□□□ -1.87
TRAM2-201ENST00000182527 KRTAP20-1Q3LI63 56 aa3.33□□□□□ -1.88
TRAM2-201ENST00000182527 TRRAPQ9Y4A5 3859 aa3.32□□□□□ -1.88
TRAM2-201ENST00000182527 FRAS1Q86XX4 4008 aa3.31□□□□□ -1.88
TRAM2-201ENST00000182527 ANK2Q01484 3957 aa3.31□□□□□ -1.88
TRAM2-201ENST00000182527 DNAH1Q9P2D7 4330 aa3.3□□□□□ -1.88
TRAM2-201ENST00000182527 KRTAP9-7A8MTY7 169 aa3.27□□□□□ -1.89
TRAM2-201ENST00000182527 LCE2BO14633 110 aa3.27□□□□□ -1.89
TRAM2-201ENST00000182527 KRTAP12-1P59990 96 aa3.23□□□□□ -1.89
TRAM2-201ENST00000182527 KRTAP10-5P60370 271 aa3.23□□□□□ -1.89
TRAM2-201ENST00000182527 LYSTQ99698 3801 aa3.22□□□□□ -1.89
TRAM2-201ENST00000182527 CMYA5Q8N3K9 4069 aa3.21□□□□□ -1.89
TRAM2-201ENST00000182527 LCE2CQ5TA81 110 aa3.21□□□□□ -1.9
TRAM2-201ENST00000182527 LCE2DQ5TA82 110 aaPredicted RBP3.2□□□□□ -1.9
TRAM2-201ENST00000182527 DNAH10Q8IVF4 4471 aa3.17□□□□□ -1.9
TRAM2-201ENST00000182527 DNAH3Q8TD57 4116 aa3.16□□□□□ -1.9
TRAM2-201ENST00000182527 DNHD1Q96M86 4753 aa3.16□□□□□ -1.9
TRAM2-201ENST00000182527 MT2AP02795 61 aa3.16□□□□□ -1.9
TRAM2-201ENST00000182527 KRTAP19-1Q8IUB9 90 aa3.15□□□□□ -1.91
TRAM2-201ENST00000182527 BIRC6Q9NR09 4857 aa3.15□□□□□ -1.91
TRAM2-201ENST00000182527 DYNC2H1Q8NCM8 4307 aaKnown RBP3.14□□□□□ -1.91
TRAM2-201ENST00000182527 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
TRAM2-201ENST00000182527 KRTAP23-1A1A580 65 aa3.14□□□□□ -1.91
TRAM2-201ENST00000182527 DNAH11Q96DT5 4516 aa3.13□□□□□ -1.91
TRAM2-201ENST00000182527 KRTAP12-3P60328 96 aa3.09□□□□□ -1.91
TRAM2-201ENST00000182527 DNAH6Q9C0G6 4158 aa3.08□□□□□ -1.92
TRAM2-201ENST00000182527 DNAH7Q8WXX0 4024 aa3.07□□□□□ -1.92
TRAM2-201ENST00000182527 KRTAP2-3P0C7H8 128 aa3.05□□□□□ -1.92
TRAM2-201ENST00000182527 KRTAP2-4Q9BYR9 128 aa3.05□□□□□ -1.92
TRAM2-201ENST00000182527 DNAH17Q9UFH2 4485 aa3.04□□□□□ -1.92
TRAM2-201ENST00000182527 KRTAP3-1Q9BYR8 98 aa3.04□□□□□ -1.92
TRAM2-201ENST00000182527 HERC1Q15751 4861 aa3.04□□□□□ -1.92
TRAM2-201ENST00000182527 DNAH9Q9NYC9 4486 aa3.03□□□□□ -1.92
TRAM2-201ENST00000182527 PLECQ15149 4684 aaKnown RBP3.03□□□□□ -1.92
TRAM2-201ENST00000182527 VPS13DQ5THJ4 4388 aa3.03□□□□□ -1.92
TRAM2-201ENST00000182527 MT1FP04733 61 aa3.02□□□□□ -1.93
TRAM2-201ENST00000182527 DNAH8Q96JB1 4490 aa3.02□□□□□ -1.93
TRAM2-201ENST00000182527 LCE3BQ5TA77 95 aa3.02□□□□□ -1.93
TRAM2-201ENST00000182527 KRTAP4-1Q9BYQ7 146 aa3.02□□□□□ -1.93
TRAM2-201ENST00000182527 DNAH2Q9P225 4427 aa3.01□□□□□ -1.93
TRAM2-201ENST00000182527 HERC2O95714 4834 aa3□□□□□ -1.93
TRAM2-201ENST00000182527 MT4P47944 62 aa2.99□□□□□ -1.93
TRAM2-201ENST00000182527 PRKDCP78527 4128 aaKnown RBP2.99□□□□□ -1.93
TRAM2-201ENST00000182527 KMT2AQ03164 3969 aa2.99□□□□□ -1.93
TRAM2-201ENST00000182527 DYNC1H1Q14204 4646 aaKnown RBP2.99□□□□□ -1.93
TRAM2-201ENST00000182527 SACSQ9NZJ4 4579 aa2.98□□□□□ -1.93
TRAM2-201ENST00000182527 RYR1P21817 5038 aa2.98□□□□□ -1.93
TRAM2-201ENST00000182527 LRP1BQ9NZR2 4599 aa2.98□□□□□ -1.93
TRAM2-201ENST00000182527 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.97□□□□□ -1.93
TRAM2-201ENST00000182527 PCLOQ9Y6V0 5065 aa2.97□□□□□ -1.93
TRAM2-201ENST00000182527 HECTD4Q9Y4D8 3996 aa2.96□□□□□ -1.94
TRAM2-201ENST00000182527 KRTAP6-3Q3LI67 103 aa2.96□□□□□ -1.94
TRAM2-201ENST00000182527 LCE3AQ5TA76 89 aa2.96□□□□□ -1.94
TRAM2-201ENST00000182527 KRTAP19-4Q3LI73 84 aa2.94□□□□□ -1.94
TRAM2-201ENST00000182527 RYR2Q92736 4967 aa2.94□□□□□ -1.94
TRAM2-201ENST00000182527 KMT2CQ8NEZ4 4911 aaKnown RBP2.94□□□□□ -1.94
TRAM2-201ENST00000182527 PKHD1L1Q86WI1 4243 aa2.92□□□□□ -1.94
TRAM2-201ENST00000182527 MYCBP2O75592 4640 aa2.9□□□□□ -1.95
TRAM2-201ENST00000182527 HSPG2P98160 4391 aa2.89□□□□□ -1.95
TRAM2-201ENST00000182527 VPS13BQ7Z7G8 4022 aa2.89□□□□□ -1.95
TRAM2-201ENST00000182527 KIAA1109Q2LD37 5005 aa2.89□□□□□ -1.95
TRAM2-201ENST00000182527 SPRR2GQ9BYE4 73 aa2.89□□□□□ -1.95
TRAM2-201ENST00000182527 DNAH5Q8TE73 4624 aa2.88□□□□□ -1.95
TRAM2-201ENST00000182527 STARD9Q9P2P6 4700 aa2.88□□□□□ -1.95
TRAM2-201ENST00000182527 HYDINQ4G0P3 5121 aa2.88□□□□□ -1.95
TRAM2-201ENST00000182527 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
TRAM2-201ENST00000182527 KRTAP2-1Q9BYU5 128 aa2.87□□□□□ -1.95
TRAM2-201ENST00000182527 KRTAP3-2Q9BYR7 98 aa2.85□□□□□ -1.95
TRAM2-201ENST00000182527 KRTAP3-3Q9BYR6 98 aa2.85□□□□□ -1.95
TRAM2-201ENST00000182527 FAT2Q9NYQ8 4349 aa2.85□□□□□ -1.95
TRAM2-201ENST00000182527 FAT3Q8TDW7 4589 aa2.83□□□□□ -1.96
TRAM2-201ENST00000182527 RYR3Q15413 4870 aa2.82□□□□□ -1.96
TRAM2-201ENST00000182527 KRTAP19-6Q3LI70 58 aa2.81□□□□□ -1.96
TRAM2-201ENST00000182527 KRTAP19-5Q3LI72 72 aa2.79□□□□□ -1.96
TRAM2-201ENST00000182527 APOBP04114 4563 aaKnown RBP2.78□□□□□ -1.96
TRAM2-201ENST00000182527 PKD1P98161 4303 aa2.77□□□□□ -1.97
TRAM2-201ENST00000182527 MT1GP13640 62 aa2.76□□□□□ -1.97
TRAM2-201ENST00000182527 PKHD1P08F94 4074 aa2.76□□□□□ -1.97
TRAM2-201ENST00000182527 FAT1Q14517 4588 aa2.74□□□□□ -1.97
TRAM2-201ENST00000182527 LCE2AQ5TA79 106 aaPredicted RBP2.73□□□□□ -1.97
TRAM2-201ENST00000182527 KRTAP19-8Q3LI54 63 aa2.73□□□□□ -1.97
TRAM2-201ENST00000182527 KRTAP9-3Q9BYQ3 159 aa2.72□□□□□ -1.97
TRAM2-201ENST00000182527 KRTAP9-8Q9BYQ0 159 aa2.71□□□□□ -1.98
TRAM2-201ENST00000182527 ABCA13Q86UQ4 5058 aa2.69□□□□□ -1.98
TRAM2-201ENST00000182527 SYNE2Q8WXH0 6885 aaKnown RBP2.67□□□□□ -1.98
TRAM2-201ENST00000182527 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
TRAM2-201ENST00000182527 LRP2P98164 4655 aa2.64□□□□□ -1.99
TRAM2-201ENST00000182527 LCE5AQ5TCM9 118 aa2.64□□□□□ -1.99
TRAM2-201ENST00000182527 LRP1Q07954 4544 aaKnown RBP2.64□□□□□ -1.99
TRAM2-201ENST00000182527 LCE3CQ5T5A8 94 aa2.63□□□□□ -1.99
TRAM2-201ENST00000182527 KRTAP19-3Q7Z4W3 81 aa2.63□□□□□ -1.99
TRAM2-201ENST00000182527 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
TRAM2-201ENST00000182527 LCE1AQ5T7P2 110 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms