RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 KRTAP8-1Q8IUC2 63 aa1.6□□□□□ -2.15
NEB-201ENST00000172853 KRTAP10-7P60409 375 aaPredicted RBP1.6□□□□□ -2.15
NEB-201ENST00000172853 PRKDCP78527 4128 aaKnown RBP1.59□□□□□ -2.16
NEB-201ENST00000172853 CSMD3Q7Z407 3707 aa1.58□□□□□ -2.16
NEB-201ENST00000172853 KRTAP10-5P60370 271 aa1.57□□□□□ -2.16
NEB-201ENST00000172853 KRTAP12-1P59990 96 aa1.57□□□□□ -2.16
NEB-201ENST00000172853 DNAH1Q9P2D7 4330 aa1.57□□□□□ -2.16
NEB-201ENST00000172853 DNAH11Q96DT5 4516 aa1.57□□□□□ -2.16
NEB-201ENST00000172853 KRTAP3-1Q9BYR8 98 aa1.56□□□□□ -2.16
NEB-201ENST00000172853 PKHD1L1Q86WI1 4243 aa1.56□□□□□ -2.16
NEB-201ENST00000172853 DNAH2Q9P225 4427 aa1.55□□□□□ -2.16
NEB-201ENST00000172853 KRTAP12-3P60328 96 aa1.54□□□□□ -2.16
NEB-201ENST00000172853 VPS13BQ7Z7G8 4022 aa1.52□□□□□ -2.17
NEB-201ENST00000172853 ANK3Q12955 4377 aaKnown RBP1.52□□□□□ -2.17
NEB-201ENST00000172853 RYR1P21817 5038 aa1.52□□□□□ -2.17
NEB-201ENST00000172853 KRTAP23-1A1A580 65 aa1.52□□□□□ -2.17
NEB-201ENST00000172853 DYNC2H1Q8NCM8 4307 aaKnown RBP1.5□□□□□ -2.17
NEB-201ENST00000172853 KRTAP3-2Q9BYR7 98 aa1.49□□□□□ -2.17
NEB-201ENST00000172853 RYR3Q15413 4870 aa1.48□□□□□ -2.17
NEB-201ENST00000172853 VPS13DQ5THJ4 4388 aa1.47□□□□□ -2.17
NEB-201ENST00000172853 KMT2AQ03164 3969 aa1.47□□□□□ -2.17
NEB-201ENST00000172853 PLECQ15149 4684 aaKnown RBP1.47□□□□□ -2.17
NEB-201ENST00000172853 DYNC1H1Q14204 4646 aaKnown RBP1.46□□□□□ -2.18
NEB-201ENST00000172853 PKHD1P08F94 4074 aa1.46□□□□□ -2.18
NEB-201ENST00000172853 SPRR2FQ96RM1 72 aa1.46□□□□□ -2.18
NEB-201ENST00000172853 FRAS1Q86XX4 4008 aa1.46□□□□□ -2.18
NEB-201ENST00000172853 MYCBP2O75592 4640 aa1.46□□□□□ -2.18
NEB-201ENST00000172853 SPRR2EP22531 72 aa1.46□□□□□ -2.18
NEB-201ENST00000172853 SPRR2BP35325 72 aa1.46□□□□□ -2.18
NEB-201ENST00000172853 SPRR2AP35326 72 aa1.46□□□□□ -2.18
NEB-201ENST00000172853 RYR2Q92736 4967 aa1.45□□□□□ -2.18
NEB-201ENST00000172853 LCE3AQ5TA76 89 aa1.45□□□□□ -2.18
NEB-201ENST00000172853 SPRR2DP22532 72 aa1.44□□□□□ -2.18
NEB-201ENST00000172853 DNAH17Q9UFH2 4485 aa1.43□□□□□ -2.18
NEB-201ENST00000172853 BIRC6Q9NR09 4857 aa1.43□□□□□ -2.18
NEB-201ENST00000172853 KRTAP4-5Q9BYR2 181 aa1.43□□□□□ -2.18
NEB-201ENST00000172853 KRTAP3-3Q9BYR6 98 aa1.42□□□□□ -2.18
NEB-201ENST00000172853 DNHD1Q96M86 4753 aa1.42□□□□□ -2.18
NEB-201ENST00000172853 DNAH5Q8TE73 4624 aa1.42□□□□□ -2.18
NEB-201ENST00000172853 KRTAP19-4Q3LI73 84 aa1.42□□□□□ -2.18
NEB-201ENST00000172853 KMT2CQ8NEZ4 4911 aaKnown RBP1.42□□□□□ -2.18
NEB-201ENST00000172853 HERC1Q15751 4861 aa1.41□□□□□ -2.18
NEB-201ENST00000172853 MT1HL1P0DM35 61 aa1.41□□□□□ -2.18
NEB-201ENST00000172853 SACSQ9NZJ4 4579 aa1.41□□□□□ -2.18
NEB-201ENST00000172853 APOBP04114 4563 aaKnown RBP1.41□□□□□ -2.18
NEB-201ENST00000172853 KRTAP12-4P60329 112 aa1.4□□□□□ -2.19
NEB-201ENST00000172853 FAT1Q14517 4588 aa1.4□□□□□ -2.19
NEB-201ENST00000172853 LRP1BQ9NZR2 4599 aa1.4□□□□□ -2.19
NEB-201ENST00000172853 HSPG2P98160 4391 aa1.39□□□□□ -2.19
NEB-201ENST00000172853 SPRR5A0A1B0GTR4 108 aa1.38□□□□□ -2.19
NEB-201ENST00000172853 DNAH9Q9NYC9 4486 aa1.38□□□□□ -2.19
NEB-201ENST00000172853 STARD9Q9P2P6 4700 aa1.38□□□□□ -2.19
NEB-201ENST00000172853 PCLOQ9Y6V0 5065 aa1.38□□□□□ -2.19
NEB-201ENST00000172853 LCE2BO14633 110 aa1.38□□□□□ -2.19
NEB-201ENST00000172853 DNAH8Q96JB1 4490 aa1.37□□□□□ -2.19
NEB-201ENST00000172853 KRTAP10-4P60372 401 aaPredicted RBP1.36□□□□□ -2.19
NEB-201ENST00000172853 FLGP20930 4061 aaPredicted RBP1.35□□□□□ -2.19
NEB-201ENST00000172853 FAT2Q9NYQ8 4349 aa1.35□□□□□ -2.19
NEB-201ENST00000172853 HERC2O95714 4834 aa1.35□□□□□ -2.19
NEB-201ENST00000172853 MT1HP80294 61 aa1.34□□□□□ -2.19
NEB-201ENST00000172853 FAT3Q8TDW7 4589 aa1.33□□□□□ -2.2
NEB-201ENST00000172853 GPR98Q8WXG9 6306 aa1.33□□□□□ -2.2
NEB-201ENST00000172853 LCE2CQ5TA81 110 aa1.33□□□□□ -2.2
NEB-201ENST00000172853 RNF213Q63HN8 5207 aa1.31□□□□□ -2.2
NEB-201ENST00000172853 KIAA1109Q2LD37 5005 aa1.31□□□□□ -2.2
NEB-201ENST00000172853 HYDINQ4G0P3 5121 aa1.31□□□□□ -2.2
NEB-201ENST00000172853 KRTAP9-6A0A140TA67 174 aa1.3□□□□□ -2.2
NEB-201ENST00000172853 KRTAP19-5Q3LI72 72 aa1.3□□□□□ -2.2
NEB-201ENST00000172853 LCE2DQ5TA82 110 aaPredicted RBP1.3□□□□□ -2.2
NEB-201ENST00000172853 KRTAP9-2Q9BYQ4 174 aa1.3□□□□□ -2.2
NEB-201ENST00000172853 ABCA13Q86UQ4 5058 aa1.3□□□□□ -2.2
NEB-201ENST00000172853 LRP2P98164 4655 aa1.3□□□□□ -2.2
NEB-201ENST00000172853 PKD1P98161 4303 aa1.29□□□□□ -2.2
NEB-201ENST00000172853 TNXBP22105 4242 aa1.29□□□□□ -2.2
NEB-201ENST00000172853 LCE3CQ5T5A8 94 aa1.29□□□□□ -2.2
NEB-201ENST00000172853 KRTAP17-1Q9BYP8 105 aa1.29□□□□□ -2.2
NEB-201ENST00000172853 KRTAP20-1Q3LI63 56 aa1.28□□□□□ -2.2
NEB-201ENST00000172853 HMCN2Q8NDA2 5059 aa1.27□□□□□ -2.21
NEB-201ENST00000172853 KRTAP4-1Q9BYQ7 146 aa1.27□□□□□ -2.21
NEB-201ENST00000172853 LCE3BQ5TA77 95 aa1.27□□□□□ -2.21
NEB-201ENST00000172853 MT2AP02795 61 aa1.26□□□□□ -2.21
NEB-201ENST00000172853 LRP1Q07954 4544 aaKnown RBP1.26□□□□□ -2.21
NEB-201ENST00000172853 SPRR2GQ9BYE4 73 aa1.25□□□□□ -2.21
NEB-201ENST00000172853 FAT4Q6V0I7 4981 aa1.24□□□□□ -2.21
NEB-201ENST00000172853 EPPK1P58107 5090 aaKnown RBP1.23□□□□□ -2.21
NEB-201ENST00000172853 LCE3DQ9BYE3 92 aa1.23□□□□□ -2.21
NEB-201ENST00000172853 MT1GP13640 62 aa1.23□□□□□ -2.21
NEB-201ENST00000172853 MT4P47944 62 aa1.22□□□□□ -2.21
NEB-201ENST00000172853 LCE3EQ5T5B0 92 aa1.22□□□□□ -2.21
NEB-201ENST00000172853 KRTAP19-1Q8IUB9 90 aa1.21□□□□□ -2.22
NEB-201ENST00000172853 MT3P25713 68 aa1.21□□□□□ -2.22
NEB-201ENST00000172853 MT1FP04733 61 aa1.2□□□□□ -2.22
NEB-201ENST00000172853 KRTAP9-7A8MTY7 169 aa1.2□□□□□ -2.22
NEB-201ENST00000172853 LCE1BQ5T7P3 118 aa1.18□□□□□ -2.22
NEB-201ENST00000172853 UBR4Q5T4S7 5183 aa1.18□□□□□ -2.22
NEB-201ENST00000172853 MUC17Q685J3 4493 aa1.18□□□□□ -2.22
NEB-201ENST00000172853 NEBP20929 6669 aa1.17□□□□□ -2.22
NEB-201ENST00000172853 LCE5AQ5TCM9 118 aa1.17□□□□□ -2.22
NEB-201ENST00000172853 LCE1DQ5T752 114 aa1.16□□□□□ -2.22
NEB-201ENST00000172853 KRTAP19-8Q3LI54 63 aa1.15□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms