RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 KRTAP10-6P60371 365 aaPredicted RBP10.38□□□□□ -0.75
PPP1R3F-201ENST00000055335 MYCBP2O75592 4640 aa10.37□□□□□ -0.75
PPP1R3F-201ENST00000055335 KRTAP3-3Q9BYR6 98 aa10.3□□□□□ -0.76
PPP1R3F-201ENST00000055335 S4R3F8 94 aa10.29□□□□□ -0.76
PPP1R3F-201ENST00000055335 KRTAP10-8P60410 259 aa10.27□□□□□ -0.76
PPP1R3F-201ENST00000055335 NDUFAF8A1L188 74 aa10.24□□□□□ -0.77
PPP1R3F-201ENST00000055335 KRTAP3-2Q9BYR7 98 aa10.24□□□□□ -0.77
PPP1R3F-201ENST00000055335 LRP1Q07954 4544 aaKnown RBP10.23□□□□□ -0.77
PPP1R3F-201ENST00000055335 KRTAP12-2P59991 146 aa10.19□□□□□ -0.78
PPP1R3F-201ENST00000055335 HSPG2P98160 4391 aa10.17□□□□□ -0.78
PPP1R3F-201ENST00000055335 KRTAP10-4P60372 401 aaPredicted RBP10.15□□□□□ -0.78
PPP1R3F-201ENST00000055335 APOBP04114 4563 aaKnown RBP10.12□□□□□ -0.79
PPP1R3F-201ENST00000055335 PKHD1L1Q86WI1 4243 aa10.09□□□□□ -0.79
PPP1R3F-201ENST00000055335 XP32Q5T750 250 aa10.05□□□□□ -0.8
PPP1R3F-201ENST00000055335 FAT3Q8TDW7 4589 aa10.02□□□□□ -0.8
PPP1R3F-201ENST00000055335 KRTAP12-1P59990 96 aa9.99□□□□□ -0.81
PPP1R3F-201ENST00000055335 KRTAP15-1Q3LI76 137 aa9.97□□□□□ -0.81
PPP1R3F-201ENST00000055335 A0A1B0GVY2 172 aa9.96□□□□□ -0.82
PPP1R3F-201ENST00000055335 LPAP08519 4548 aa9.89□□□□□ -0.83
PPP1R3F-201ENST00000055335 Q5VSD8 79 aa9.87□□□□□ -0.83
PPP1R3F-201ENST00000055335 KMT2CQ8NEZ4 4911 aaKnown RBP9.83□□□□□ -0.84
PPP1R3F-201ENST00000055335 M0QZ58 72 aa9.8□□□□□ -0.84
PPP1R3F-201ENST00000055335 TNXBP22105 4242 aa9.8□□□□□ -0.84
PPP1R3F-201ENST00000055335 LRP2P98164 4655 aa9.79□□□□□ -0.84
PPP1R3F-201ENST00000055335 R4GN34 69 aa9.72□□□□□ -0.85
PPP1R3F-201ENST00000055335 RYR2Q92736 4967 aa9.64□□□□□ -0.87
PPP1R3F-201ENST00000055335 KIAA1109Q2LD37 5005 aa9.56□□□□□ -0.88
PPP1R3F-201ENST00000055335 KRTAP17-1Q9BYP8 105 aa9.53□□□□□ -0.88
PPP1R3F-201ENST00000055335 PLAC4Q8WY50 150 aa9.52□□□□□ -0.89
PPP1R3F-201ENST00000055335 RYR1P21817 5038 aa9.48□□□□□ -0.89
PPP1R3F-201ENST00000055335 LORP23490 312 aaPredicted RBP9.48□□□□□ -0.89
PPP1R3F-201ENST00000055335 MT1HL1P0DM35 61 aa9.47□□□□□ -0.89
PPP1R3F-201ENST00000055335 RYR3Q15413 4870 aa9.44□□□□□ -0.9
PPP1R3F-201ENST00000055335 CAMK2N1Q7Z7J9 78 aa9.37□□□□□ -0.91
PPP1R3F-201ENST00000055335 ABCA13Q86UQ4 5058 aa9.33□□□□□ -0.92
PPP1R3F-201ENST00000055335 LUZP6Q538Z0 58 aa9.3□□□□□ -0.92
PPP1R3F-201ENST00000055335 A0A0A0MQY5 61 aa9.14□□□□□ -0.95
PPP1R3F-201ENST00000055335 SEC61BP60468 96 aaKnown RBP9.11□□□□□ -0.95
PPP1R3F-201ENST00000055335 KRTAP4-1Q9BYQ7 146 aa9.08□□□□□ -0.96
PPP1R3F-201ENST00000055335 MUC2Q02817 5179 aa9.07□□□□□ -0.96
PPP1R3F-201ENST00000055335 KRTAP4-5Q9BYR2 181 aa9.05□□□□□ -0.96
PPP1R3F-201ENST00000055335 KRTAP21-3Q3LHN1 58 aa9.02□□□□□ -0.96
PPP1R3F-201ENST00000055335 PP632Q6XCG6 107 aa9.01□□□□□ -0.97
PPP1R3F-201ENST00000055335 EPPK1P58107 5090 aaKnown RBP9□□□□□ -0.97
PPP1R3F-201ENST00000055335 MUC17Q685J3 4493 aa8.94□□□□□ -0.98
PPP1R3F-201ENST00000055335 J3QL48 77 aa8.91□□□□□ -0.98
PPP1R3F-201ENST00000055335 TNP1P09430 55 aa8.87□□□□□ -0.99
PPP1R3F-201ENST00000055335 KRTAP19-2Q3LHN2 52 aa8.66□□□□□ -1.02
PPP1R3F-201ENST00000055335 HERC2O95714 4834 aa8.62□□□□□ -1.03
PPP1R3F-201ENST00000055335 FAT4Q6V0I7 4981 aa8.59□□□□□ -1.03
PPP1R3F-201ENST00000055335 PCLOQ9Y6V0 5065 aa8.57□□□□□ -1.04
PPP1R3F-201ENST00000055335 FLGP20930 4061 aaPredicted RBP8.53□□□□□ -1.04
PPP1R3F-201ENST00000055335 M0R2T5 61 aa8.46□□□□□ -1.05
PPP1R3F-201ENST00000055335 SPRR5A0A1B0GTR4 108 aa8.41□□□□□ -1.06
PPP1R3F-201ENST00000055335 LCE3AQ5TA76 89 aa8.38□□□□□ -1.07
PPP1R3F-201ENST00000055335 HERC1Q15751 4861 aa8.34□□□□□ -1.07
PPP1R3F-201ENST00000055335 KRTAP23-1A1A580 65 aa8.33□□□□□ -1.08
PPP1R3F-201ENST00000055335 RNF213Q63HN8 5207 aa8.25□□□□□ -1.09
PPP1R3F-201ENST00000055335 KRTAP19-1Q8IUB9 90 aa8.22□□□□□ -1.09
PPP1R3F-201ENST00000055335 BIRC6Q9NR09 4857 aa8.21□□□□□ -1.09
PPP1R3F-201ENST00000055335 KRTAP10-10P60014 251 aa8.19□□□□□ -1.1
PPP1R3F-201ENST00000055335 HMCN2Q8NDA2 5059 aa8.16□□□□□ -1.1
PPP1R3F-201ENST00000055335 SPRR2GQ9BYE4 73 aa8.15□□□□□ -1.1
PPP1R3F-201ENST00000055335 LCE2CQ5TA81 110 aa8.07□□□□□ -1.12
PPP1R3F-201ENST00000055335 PRO2289Q9P1D8 64 aa8.01□□□□□ -1.13
PPP1R3F-201ENST00000055335 MT1FP04733 61 aa7.99□□□□□ -1.13
PPP1R3F-201ENST00000055335 UBR4Q5T4S7 5183 aa7.96□□□□□ -1.14
PPP1R3F-201ENST00000055335 KRTAP12-3P60328 96 aa7.92□□□□□ -1.14
PPP1R3F-201ENST00000055335 MT2AP02795 61 aa7.92□□□□□ -1.14
PPP1R3F-201ENST00000055335 MT1HP80294 61 aa7.92□□□□□ -1.14
PPP1R3F-201ENST00000055335 KRTAP8-1Q8IUC2 63 aa7.91□□□□□ -1.14
PPP1R3F-201ENST00000055335 KRTAP10-12P60413 245 aa7.86□□□□□ -1.15
PPP1R3F-201ENST00000055335 INE1O15225 51 aa7.81□□□□□ -1.16
PPP1R3F-201ENST00000055335 KRTAP10-5P60370 271 aa7.79□□□□□ -1.16
PPP1R3F-201ENST00000055335 MT1XP80297 61 aa7.78□□□□□ -1.16
PPP1R3F-201ENST00000055335 KRTAP10-7P60409 375 aaPredicted RBP7.75□□□□□ -1.17
PPP1R3F-201ENST00000055335 KRTAP9-8Q9BYQ0 159 aa7.75□□□□□ -1.17
PPP1R3F-201ENST00000055335 MT1BP07438 61 aa7.72□□□□□ -1.17
PPP1R3F-201ENST00000055335 KMT2DO14686 5537 aa7.65□□□□□ -1.18
PPP1R3F-201ENST00000055335 KRTAP19-8Q3LI54 63 aa7.65□□□□□ -1.18
PPP1R3F-201ENST00000055335 USH2AO75445 5202 aa7.57□□□□□ -1.2
PPP1R3F-201ENST00000055335 KRTAP19-5Q3LI72 72 aa7.48□□□□□ -1.21
PPP1R3F-201ENST00000055335 LCE3CQ5T5A8 94 aa7.39□□□□□ -1.23
PPP1R3F-201ENST00000055335 KRTAP9-3Q9BYQ3 159 aa7.37□□□□□ -1.23
PPP1R3F-201ENST00000055335 KRTAP4-8A0A0G2JLE6 195 aa7.32□□□□□ -1.24
PPP1R3F-201ENST00000055335 KRTAP4-8Q9BYQ9 185 aa7.32□□□□□ -1.24
PPP1R3F-201ENST00000055335 KRTAP9-6A8MVA2 160 aa7.24□□□□□ -1.25
PPP1R3F-201ENST00000055335 KRTAP4-7Q9BYR0 210 aa7.24□□□□□ -1.25
PPP1R3F-201ENST00000055335 LCE2BO14633 110 aa7.14□□□□□ -1.27
PPP1R3F-201ENST00000055335 FSIP2Q5CZC0 6907 aa6.97□□□□□ -1.29
PPP1R3F-201ENST00000055335 KRTAP19-7Q3SYF9 63 aa6.91□□□□□ -1.3
PPP1R3F-201ENST00000055335 KRTAP2-3P0C7H8 128 aa6.89□□□□□ -1.31
PPP1R3F-201ENST00000055335 KRTAP2-4Q9BYR9 128 aa6.89□□□□□ -1.31
PPP1R3F-201ENST00000055335 KRTAP2-1Q9BYU5 128 aa6.89□□□□□ -1.31
PPP1R3F-201ENST00000055335 CRCT1Q9UGL9 99 aa6.79□□□□□ -1.32
PPP1R3F-201ENST00000055335 MT1LQ93083 61 aa6.75□□□□□ -1.33
PPP1R3F-201ENST00000055335 DSTQ03001 7570 aaKnown RBP6.73□□□□□ -1.33
PPP1R3F-201ENST00000055335 LOC100996750A0A140TA64 210 aa6.72□□□□□ -1.33
PPP1R3F-201ENST00000055335 MT1EP04732 61 aa6.67□□□□□ -1.34
PPP1R3F-201ENST00000055335 KRTAP4-3Q9BYR4 195 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms