RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 COX6B2Q6YFQ2 88 aa13.61□□□□□ -0.23
RTN4R-201ENST00000043402 MIR22HGQ0VDD5 57 aa13.59□□□□□ -0.23
RTN4R-201ENST00000043402 KRTAP4-5Q9BYR2 181 aa13.52□□□□□ -0.24
RTN4R-201ENST00000043402 ABCA13Q86UQ4 5058 aa13.43□□□□□ -0.26
RTN4R-201ENST00000043402 LRP2P98164 4655 aa13.4□□□□□ -0.26
RTN4R-201ENST00000043402 RBM12B-AS1Q9P1G2 102 aa13.39□□□□□ -0.27
RTN4R-201ENST00000043402 LPAP08519 4548 aa13.39□□□□□ -0.27
RTN4R-201ENST00000043402 TPRXLQ17RH7 258 aa13.35□□□□□ -0.27
RTN4R-201ENST00000043402 KRTAP3-3Q9BYR6 98 aa13.27□□□□□ -0.29
RTN4R-201ENST00000043402 PRAC1Q96KF2 57 aa13.18□□□□□ -0.3
RTN4R-201ENST00000043402 ADM2Q7Z4H4 148 aa13.18□□□□□ -0.3
RTN4R-201ENST00000043402 H0YAA0 97 aa13.17□□□□□ -0.3
RTN4R-201ENST00000043402 A0A1B0GU33 70 aa13.17□□□□□ -0.3
RTN4R-201ENST00000043402 H1FX-AS1Q4G0G2 97 aa13.13□□□□□ -0.31
RTN4R-201ENST00000043402 S4R3F8 94 aa13.13□□□□□ -0.31
RTN4R-201ENST00000043402 HERC2O95714 4834 aa13.12□□□□□ -0.31
RTN4R-201ENST00000043402 KRTAP10-6P60371 365 aaPredicted RBP13□□□□□ -0.33
RTN4R-201ENST00000043402 J3QL48 77 aa12.97□□□□□ -0.33
RTN4R-201ENST00000043402 BIRC6Q9NR09 4857 aa12.97□□□□□ -0.33
RTN4R-201ENST00000043402 KRTAP3-2Q9BYR7 98 aa12.96□□□□□ -0.34
RTN4R-201ENST00000043402 MUC17Q685J3 4493 aa12.85□□□□□ -0.35
RTN4R-201ENST00000043402 CSAG1Q6PB30 78 aa12.84□□□□□ -0.35
RTN4R-201ENST00000043402 SEC61BP60468 96 aaKnown RBP12.83□□□□□ -0.36
RTN4R-201ENST00000043402 P0C880 135 aa12.8□□□□□ -0.36
RTN4R-201ENST00000043402 KRTAP13-4Q3LI77 160 aa12.8□□□□□ -0.36
RTN4R-201ENST00000043402 LINC01554Q52M75 96 aa12.75□□□□□ -0.37
RTN4R-201ENST00000043402 KRTAP4-1Q9BYQ7 146 aa12.75□□□□□ -0.37
RTN4R-201ENST00000043402 K7ERS5 55 aa12.74□□□□□ -0.37
RTN4R-201ENST00000043402 A0A0D9SG42 100 aa12.59□□□□□ -0.39
RTN4R-201ENST00000043402 PCLOQ9Y6V0 5065 aa12.56□□□□□ -0.4
RTN4R-201ENST00000043402 KRTAP25-1Q3LHN0 102 aa12.53□□□□□ -0.4
RTN4R-201ENST00000043402 HERC1Q15751 4861 aa12.51□□□□□ -0.41
RTN4R-201ENST00000043402 KRTAP19-2Q3LHN2 52 aa12.5□□□□□ -0.41
RTN4R-201ENST00000043402 MUC2Q02817 5179 aa12.46□□□□□ -0.41
RTN4R-201ENST00000043402 ROMO1P60602 79 aa12.42□□□□□ -0.42
RTN4R-201ENST00000043402 HMCN2Q8NDA2 5059 aa12.39□□□□□ -0.43
RTN4R-201ENST00000043402 M0QZ58 72 aa12.35□□□□□ -0.43
RTN4R-201ENST00000043402 CRIPTQ9P021 101 aa12.33□□□□□ -0.44
RTN4R-201ENST00000043402 KRTAP12-2P59991 146 aa12.32□□□□□ -0.44
RTN4R-201ENST00000043402 KRTAP12-1P59990 96 aa12.27□□□□□ -0.45
RTN4R-201ENST00000043402 FLGP20930 4061 aaPredicted RBP12.2□□□□□ -0.46
RTN4R-201ENST00000043402 SPINT4Q6UDR6 99 aa12.19□□□□□ -0.46
RTN4R-201ENST00000043402 LORP23490 312 aaPredicted RBP12.19□□□□□ -0.46
RTN4R-201ENST00000043402 R4GN34 69 aa12.15□□□□□ -0.46
RTN4R-201ENST00000043402 C10orf95Q9H7T3 257 aa11.93□□□□□ -0.5
RTN4R-201ENST00000043402 LCE2CQ5TA81 110 aa11.91□□□□□ -0.5
RTN4R-201ENST00000043402 FAT4Q6V0I7 4981 aa11.9□□□□□ -0.5
RTN4R-201ENST00000043402 UBR4Q5T4S7 5183 aa11.83□□□□□ -0.52
RTN4R-201ENST00000043402 RNF213Q63HN8 5207 aa11.8□□□□□ -0.52
RTN4R-201ENST00000043402 MT1HP80294 61 aa11.59□□□□□ -0.55
RTN4R-201ENST00000043402 M0R2T5 61 aa11.51□□□□□ -0.57
RTN4R-201ENST00000043402 CAMK2N1Q7Z7J9 78 aa11.45□□□□□ -0.58
RTN4R-201ENST00000043402 H3BS24 57 aa11.42□□□□□ -0.58
RTN4R-201ENST00000043402 KRTAP15-1Q3LI76 137 aa11.4□□□□□ -0.59
RTN4R-201ENST00000043402 SPRR2GQ9BYE4 73 aa11.36□□□□□ -0.59
RTN4R-201ENST00000043402 KRTAP19-1Q8IUB9 90 aa11.35□□□□□ -0.59
RTN4R-201ENST00000043402 MT2AP02795 61 aa11.3□□□□□ -0.6
RTN4R-201ENST00000043402 MT1FP04733 61 aa11.28□□□□□ -0.6
RTN4R-201ENST00000043402 KRTAP9-8Q9BYQ0 159 aa11.28□□□□□ -0.6
RTN4R-201ENST00000043402 KRTAP10-10P60014 251 aa11.21□□□□□ -0.61
RTN4R-201ENST00000043402 PLAC4Q8WY50 150 aa11.09□□□□□ -0.63
RTN4R-201ENST00000043402 PP632Q6XCG6 107 aa11.06□□□□□ -0.64
RTN4R-201ENST00000043402 NDUFAF8A1L188 74 aa11.04□□□□□ -0.64
RTN4R-201ENST00000043402 TNP1P09430 55 aa10.99□□□□□ -0.65
RTN4R-201ENST00000043402 KRTAP19-8Q3LI54 63 aa10.93□□□□□ -0.66
RTN4R-201ENST00000043402 MT1BP07438 61 aa10.83□□□□□ -0.68
RTN4R-201ENST00000043402 KRTAP9-3Q9BYQ3 159 aa10.83□□□□□ -0.68
RTN4R-201ENST00000043402 KRTAP23-1A1A580 65 aa10.77□□□□□ -0.69
RTN4R-201ENST00000043402 KRTAP10-5P60370 271 aa10.65□□□□□ -0.71
RTN4R-201ENST00000043402 MT1XP80297 61 aa10.63□□□□□ -0.71
RTN4R-201ENST00000043402 LCE2AQ5TA79 106 aaPredicted RBP10.61□□□□□ -0.71
RTN4R-201ENST00000043402 LCE3AQ5TA76 89 aa10.52□□□□□ -0.73
RTN4R-201ENST00000043402 LCE2BO14633 110 aa10.46□□□□□ -0.73
RTN4R-201ENST00000043402 LUZP6Q538Z0 58 aa10.45□□□□□ -0.74
RTN4R-201ENST00000043402 USH2AO75445 5202 aa10.3□□□□□ -0.76
RTN4R-201ENST00000043402 KRTAP10-7P60409 375 aaPredicted RBP10.3□□□□□ -0.76
RTN4R-201ENST00000043402 KRTAP8-1Q8IUC2 63 aa10.26□□□□□ -0.77
RTN4R-201ENST00000043402 PRO2289Q9P1D8 64 aa10.25□□□□□ -0.77
RTN4R-201ENST00000043402 SPRR5A0A1B0GTR4 108 aa10.25□□□□□ -0.77
RTN4R-201ENST00000043402 KRTAP10-12P60413 245 aa10.25□□□□□ -0.77
RTN4R-201ENST00000043402 KRTAP12-3P60328 96 aa10.02□□□□□ -0.8
RTN4R-201ENST00000043402 KMT2DO14686 5537 aa9.9□□□□□ -0.82
RTN4R-201ENST00000043402 A0A0A0MQY5 61 aa9.83□□□□□ -0.84
RTN4R-201ENST00000043402 KRTAP4-8A0A0G2JLE6 195 aa9.78□□□□□ -0.84
RTN4R-201ENST00000043402 KRTAP19-5Q3LI72 72 aa9.78□□□□□ -0.84
RTN4R-201ENST00000043402 KRTAP4-8Q9BYQ9 185 aa9.78□□□□□ -0.84
RTN4R-201ENST00000043402 SSPOA2VEC9 5147 aa9.75□□□□□ -0.85
RTN4R-201ENST00000043402 FSIP2Q5CZC0 6907 aa9.56□□□□□ -0.88
RTN4R-201ENST00000043402 KRTAP19-6Q3LI70 58 aa9.53□□□□□ -0.88
RTN4R-201ENST00000043402 KRTAP19-7Q3SYF9 63 aa9.49□□□□□ -0.89
RTN4R-201ENST00000043402 LCE3CQ5T5A8 94 aa9.41□□□□□ -0.9
RTN4R-201ENST00000043402 LCE2DQ5TA82 110 aaPredicted RBP9.26□□□□□ -0.93
RTN4R-201ENST00000043402 MT1EP04732 61 aa9.24□□□□□ -0.93
RTN4R-201ENST00000043402 MT1LQ93083 61 aa9.16□□□□□ -0.94
RTN4R-201ENST00000043402 FCGBPQ9Y6R7 5405 aaPredicted RBP9.15□□□□□ -0.94
RTN4R-201ENST00000043402 KRTAP4-7Q9BYR0 210 aa9.14□□□□□ -0.95
RTN4R-201ENST00000043402 KRTAP9-6A8MVA2 160 aa9.09□□□□□ -0.95
RTN4R-201ENST00000043402 KRTAP19-4Q3LI73 84 aa9.02□□□□□ -0.97
RTN4R-201ENST00000043402 INE1O15225 51 aa8.95□□□□□ -0.98
RTN4R-201ENST00000043402 MUC12Q9UKN1 5478 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms