RNA–Protein interactions for RNA: ENST00000002829.7

SEMA3F-201, Transcript of semaphorin 3F, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-201ENST00000002829 FAT3Q8TDW7 4589 aa7.03□□□□□ -1.28
SEMA3F-201ENST00000002829 DYNC1H1Q14204 4646 aaKnown RBP7.02□□□□□ -1.28
SEMA3F-201ENST00000002829 M0QZ58 72 aa7□□□□□ -1.29
SEMA3F-201ENST00000002829 R4GN34 69 aa7□□□□□ -1.29
SEMA3F-201ENST00000002829 LRP1Q07954 4544 aaKnown RBP7□□□□□ -1.29
SEMA3F-201ENST00000002829 LUZP6Q538Z0 58 aa6.99□□□□□ -1.29
SEMA3F-201ENST00000002829 DYNC2H1Q8NCM8 4307 aaKnown RBP6.97□□□□□ -1.29
SEMA3F-201ENST00000002829 KRTAP13-4Q3LI77 160 aa6.96□□□□□ -1.3
SEMA3F-201ENST00000002829 TPRXLQ17RH7 258 aa6.94□□□□□ -1.3
SEMA3F-201ENST00000002829 KIAA1109Q2LD37 5005 aa6.93□□□□□ -1.3
SEMA3F-201ENST00000002829 CAMK2N1Q7Z7J9 78 aa6.9□□□□□ -1.3
SEMA3F-201ENST00000002829 SACSQ9NZJ4 4579 aa6.86□□□□□ -1.31
SEMA3F-201ENST00000002829 KRTAP10-4P60372 401 aaPredicted RBP6.86□□□□□ -1.31
SEMA3F-201ENST00000002829 RYR1P21817 5038 aa6.85□□□□□ -1.31
SEMA3F-201ENST00000002829 FAT2Q9NYQ8 4349 aa6.85□□□□□ -1.31
SEMA3F-201ENST00000002829 KRTAP12-2P59991 146 aa6.84□□□□□ -1.31
SEMA3F-201ENST00000002829 APOBP04114 4563 aaKnown RBP6.84□□□□□ -1.32
SEMA3F-201ENST00000002829 KRTAP21-3Q3LHN1 58 aa6.83□□□□□ -1.32
SEMA3F-201ENST00000002829 ALMS1Q8TCU4 4167 aa6.83□□□□□ -1.32
SEMA3F-201ENST00000002829 M0R2T5 61 aa6.82□□□□□ -1.32
SEMA3F-201ENST00000002829 KMT2CQ8NEZ4 4911 aaKnown RBP6.81□□□□□ -1.32
SEMA3F-201ENST00000002829 A0A0A0MQY5 61 aa6.8□□□□□ -1.32
SEMA3F-201ENST00000002829 SEC61BP60468 96 aaKnown RBP6.79□□□□□ -1.32
SEMA3F-201ENST00000002829 KRTAP4-5Q9BYR2 181 aa6.79□□□□□ -1.32
SEMA3F-201ENST00000002829 KRTAP10-6P60371 365 aaPredicted RBP6.77□□□□□ -1.33
SEMA3F-201ENST00000002829 RYR3Q15413 4870 aa6.74□□□□□ -1.33
SEMA3F-201ENST00000002829 KRTAP3-3Q9BYR6 98 aa6.69□□□□□ -1.34
SEMA3F-201ENST00000002829 MT1HL1P0DM35 61 aa6.68□□□□□ -1.34
SEMA3F-201ENST00000002829 KRTAP17-1Q9BYP8 105 aa6.66□□□□□ -1.34
SEMA3F-201ENST00000002829 PLAC4Q8WY50 150 aa6.64□□□□□ -1.35
SEMA3F-201ENST00000002829 LRP2P98164 4655 aa6.63□□□□□ -1.35
SEMA3F-201ENST00000002829 KRTAP12-1P59990 96 aa6.62□□□□□ -1.35
SEMA3F-201ENST00000002829 KRTAP3-2Q9BYR7 98 aa6.62□□□□□ -1.35
SEMA3F-201ENST00000002829 PKD1P98161 4303 aa6.59□□□□□ -1.35
SEMA3F-201ENST00000002829 RYR2Q92736 4967 aa6.51□□□□□ -1.37
SEMA3F-201ENST00000002829 KRTAP15-1Q3LI76 137 aa6.51□□□□□ -1.37
SEMA3F-201ENST00000002829 HSPG2P98160 4391 aa6.51□□□□□ -1.37
SEMA3F-201ENST00000002829 LPAP08519 4548 aa6.47□□□□□ -1.37
SEMA3F-201ENST00000002829 LORP23490 312 aaPredicted RBP6.45□□□□□ -1.38
SEMA3F-201ENST00000002829 EPPK1P58107 5090 aaKnown RBP6.43□□□□□ -1.38
SEMA3F-201ENST00000002829 KRTAP4-1Q9BYQ7 146 aa6.32□□□□□ -1.4
SEMA3F-201ENST00000002829 MUC2Q02817 5179 aa6.32□□□□□ -1.4
SEMA3F-201ENST00000002829 PKHD1L1Q86WI1 4243 aa6.3□□□□□ -1.4
SEMA3F-201ENST00000002829 HERC2O95714 4834 aa6.28□□□□□ -1.4
SEMA3F-201ENST00000002829 TNP1P09430 55 aa6.26□□□□□ -1.41
SEMA3F-201ENST00000002829 ABCA13Q86UQ4 5058 aa6.25□□□□□ -1.41
SEMA3F-201ENST00000002829 KRTAP10-10P60014 251 aa6.24□□□□□ -1.41
SEMA3F-201ENST00000002829 PP632Q6XCG6 107 aa6.19□□□□□ -1.42
SEMA3F-201ENST00000002829 TNXBP22105 4242 aa6.13□□□□□ -1.43
SEMA3F-201ENST00000002829 RNF213Q63HN8 5207 aa6.09□□□□□ -1.43
SEMA3F-201ENST00000002829 FAT4Q6V0I7 4981 aa6.05□□□□□ -1.44
SEMA3F-201ENST00000002829 HERC1Q15751 4861 aa6.04□□□□□ -1.44
SEMA3F-201ENST00000002829 PCLOQ9Y6V0 5065 aa5.99□□□□□ -1.45
SEMA3F-201ENST00000002829 UBR4Q5T4S7 5183 aa5.83□□□□□ -1.48
SEMA3F-201ENST00000002829 FSIP2Q5CZC0 6907 aa5.81□□□□□ -1.48
SEMA3F-201ENST00000002829 LCE3AQ5TA76 89 aa5.72□□□□□ -1.49
SEMA3F-201ENST00000002829 BIRC6Q9NR09 4857 aa5.68□□□□□ -1.5
SEMA3F-201ENST00000002829 HMCN2Q8NDA2 5059 aa5.66□□□□□ -1.5
SEMA3F-201ENST00000002829 MT1HP80294 61 aa5.65□□□□□ -1.5
SEMA3F-201ENST00000002829 MT1FP04733 61 aa5.64□□□□□ -1.51
SEMA3F-201ENST00000002829 MUC17Q685J3 4493 aa5.61□□□□□ -1.51
SEMA3F-201ENST00000002829 MT2AP02795 61 aa5.6□□□□□ -1.51
SEMA3F-201ENST00000002829 KRTAP19-2Q3LHN2 52 aa5.58□□□□□ -1.52
SEMA3F-201ENST00000002829 PRO2289Q9P1D8 64 aa5.56□□□□□ -1.52
SEMA3F-201ENST00000002829 KRTAP19-1Q8IUB9 90 aa5.55□□□□□ -1.52
SEMA3F-201ENST00000002829 KRTAP10-12P60413 245 aa5.52□□□□□ -1.53
SEMA3F-201ENST00000002829 LCE2CQ5TA81 110 aa5.51□□□□□ -1.53
SEMA3F-201ENST00000002829 FLGP20930 4061 aaPredicted RBP5.51□□□□□ -1.53
SEMA3F-201ENST00000002829 OBSCNQ5VST9 7968 aa5.48□□□□□ -1.53
SEMA3F-201ENST00000002829 KRTAP12-3P60328 96 aa5.47□□□□□ -1.53
SEMA3F-201ENST00000002829 USH2AO75445 5202 aa5.46□□□□□ -1.53
SEMA3F-201ENST00000002829 SPRR2GQ9BYE4 73 aa5.45□□□□□ -1.54
SEMA3F-201ENST00000002829 INE1O15225 51 aa5.42□□□□□ -1.54
SEMA3F-201ENST00000002829 KRTAP10-7P60409 375 aaPredicted RBP5.34□□□□□ -1.55
SEMA3F-201ENST00000002829 KMT2DO14686 5537 aa5.34□□□□□ -1.55
SEMA3F-201ENST00000002829 KRTAP9-8Q9BYQ0 159 aa5.34□□□□□ -1.55
SEMA3F-201ENST00000002829 CRCT1Q9UGL9 99 aa5.34□□□□□ -1.55
SEMA3F-201ENST00000002829 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
SEMA3F-201ENST00000002829 MT1BP07438 61 aa5.26□□□□□ -1.57
SEMA3F-201ENST00000002829 MT1XP80297 61 aa5.25□□□□□ -1.57
SEMA3F-201ENST00000002829 KRTAP4-8A0A0G2JLE6 195 aa5.23□□□□□ -1.57
SEMA3F-201ENST00000002829 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
SEMA3F-201ENST00000002829 KRTAP10-5P60370 271 aa5.22□□□□□ -1.57
SEMA3F-201ENST00000002829 SYNE1Q8NF91 8797 aaKnown RBP5.19□□□□□ -1.58
SEMA3F-201ENST00000002829 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
SEMA3F-201ENST00000002829 DSTQ03001 7570 aaKnown RBP5.18□□□□□ -1.58
SEMA3F-201ENST00000002829 SPRR5A0A1B0GTR4 108 aa5.16□□□□□ -1.58
SEMA3F-201ENST00000002829 KRTAP8-1Q8IUC2 63 aa5.13□□□□□ -1.59
SEMA3F-201ENST00000002829 KRTAP19-8Q3LI54 63 aa5.11□□□□□ -1.59
SEMA3F-201ENST00000002829 KRTAP9-3Q9BYQ3 159 aa5.1□□□□□ -1.59
SEMA3F-201ENST00000002829 LCE2BO14633 110 aa5.06□□□□□ -1.6
SEMA3F-201ENST00000002829 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
SEMA3F-201ENST00000002829 FCGBPQ9Y6R7 5405 aaPredicted RBP5.04□□□□□ -1.6
SEMA3F-201ENST00000002829 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
SEMA3F-201ENST00000002829 MUC12Q9UKN1 5478 aa4.79□□□□□ -1.64
SEMA3F-201ENST00000002829 SYNE2Q8WXH0 6885 aaKnown RBP4.74□□□□□ -1.65
SEMA3F-201ENST00000002829 KRTAP4-3Q9BYR4 195 aa4.73□□□□□ -1.65
SEMA3F-201ENST00000002829 SPRR2FQ96RM1 72 aa4.72□□□□□ -1.65
SEMA3F-201ENST00000002829 MT1GP13640 62 aa4.72□□□□□ -1.65
SEMA3F-201ENST00000002829 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms