RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 3110021N24RikJ3QMN2 152 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Pglyrp4Q0VB07 374 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 H1fxQ80ZM5 188 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Dennd4aE9Q8V6 1869 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Foxl2O88470 375 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ighv1-62-3P01754 117 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Spata46Q4FZF2 204 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 CadB2RQC6 2225 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Tmem200bD3Z0P8 284 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Klk1b4P00757 256 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Arfgef3Q3UGY8 2170 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Fhl4Q8CDC8 279 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Atp6v0bQ91V37 205 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 PtprdQ64487 1912 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Eid2bE9Q2Y0 151 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ighv3-6P18531 116 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Nit2Q9JHW2 276 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Tcrg-C1A0A075B5Z0 172 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ighv8-2A0A0A6YW58 119 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 P03980 138 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Anapc1P53995 1944 aaKnown RBP12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Plxna2P70207 1894 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 P01792 123 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 9130213A22RikQ3V3T2 120 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ighv14-1A0A075B5R4 117 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ighv5-8A0A075B676 92 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Igkv4-53A0A0G2JFC6 119 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ighv1-69A0A0G2JFS5 117 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Igkv1-99F6XWB2 120 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ighv1-80A0A075B5Y3 117 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Igkv19-93A0A0G2JFZ3 115 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Gm10881P01642 115 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Cela2aP05208 271 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Gm2174F6ZVF2 133 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Znf740Q6NZQ6 180 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Il19Q8CJ70 176 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ube2e2Q91W82 201 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 KprpB2RUR4 657 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 P01789 122 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Mbd6Q3TY92 1003 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 C730034F03RikQ8BGL5 111 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Gemin7Q9CWY4 129 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Klk4Q9Z0M1 255 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Plxnb3Q9QY40 1902 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 P01649 108 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 P01812 117 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Tcl1b2P56841 117 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Igkv4-57-1A0A075B5M4 119 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Igkv20-101-2A0A0G2JDU3 113 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Wt1P22561 449 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Tmem86bQ497J1 226 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Gm12169F2Z474 250 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Igll1P20764 209 aa12.83□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 PmvkQ9D1G2 192 aa12.83□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Rpl35aO55142 110 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Ifi27l2aQ8R412 90 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Gm9970F6ZED4 185 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Gm20517G3UVU6 152 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 P01802 115 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Igkv5-37A0A140T8N4 115 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Inafm1E9PV59 130 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Fam110dQ80X91 271 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Tctex1d4Q8CDY7 219 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Col4a6B1AVK5 1691 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Lamtor3O88653 124 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Id3P41133 119 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Ndufa3Q9CQ91 84 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Pygo1Q9D0P5 417 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Rnf166Q3U9F6 237 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Gm7489Q3UT34 171 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Vwc2lQ505H4 222 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Wipf2Q6PEV3 440 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Mogat1Q91ZV4 335 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Ighv1-9A0A0A6YW37 117 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Shisal2aA2A9G7 189 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Gm6034E9Q101 117 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Gm19684G3UZ45 117 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Lyzl4Q9D925 145 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Trip12G5E870 2025 aaKnown RBP12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Ube2wQ8VDW4 151 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Fam216aQ9DB54 251 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Pet100P0DJE0 76 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Cmc4Q61908 68 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Igkv4-68A0A0B4J1I7 117 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Atp6v0e1Q9CQD8 81 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 PkigO70139 76 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Rnf183Q8QZS5 190 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Trav6d-7A0A075B6B0 112 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Pde6hP61249 83 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Ndufc2Q9CQ54 120 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Dopey2Q3UHQ6 2295 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Gm16381A0A1Y7VKT9 73 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Gm2564F6Z9S8 108 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Ccl19O70460 108 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Ypel3P61237 119 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 CrygbP04344 175 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 OtosQ8R448 89 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Cxcl14Q9WUQ5 99 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Ighv1-58A0A075B5W9 117 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Igkv8-24A0A140T8P5 121 aa12.8□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 110.5 ms