RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	LOC110117498	A0A087WWA1	95 aa		7.79	□□□□□ -1.16
PHGDH-231	ENST00000641939	PDE6G	P18545	87 aa		7.78	□□□□□ -1.16
PHGDH-231	ENST00000641939		A0A1B0GVX0	72 aa		7.77	□□□□□ -1.17
PHGDH-231	ENST00000641939		J3KT08	172 aa		7.77	□□□□□ -1.17
PHGDH-231	ENST00000641939		A0A1B0GW54	56 aa		7.76	□□□□□ -1.17
PHGDH-231	ENST00000641939	C9orf118	A6NHY6	69 aa		7.76	□□□□□ -1.17
PHGDH-231	ENST00000641939	C8orf87	E5RJ46	101 aa		7.76	□□□□□ -1.17
PHGDH-231	ENST00000641939		M0R2T5	61 aa		7.75	□□□□□ -1.17
PHGDH-231	ENST00000641939	C14orf132	Q9NPU4	83 aa		7.75	□□□□□ -1.17
PHGDH-231	ENST00000641939	TAX1BP3	O14907	124 aa		7.74	□□□□□ -1.17
PHGDH-231	ENST00000641939		A0A1W2PPM0	123 aa		7.73	□□□□□ -1.17
PHGDH-231	ENST00000641939	KRTAP10-6	P60371	365 aa	Predicted RBP	7.71	□□□□□ -1.18
PHGDH-231	ENST00000641939	LCE2D	Q5TA82	110 aa	Predicted RBP	7.71	□□□□□ -1.18
PHGDH-231	ENST00000641939	NDUFB1	O75438	58 aa		7.7	□□□□□ -1.18
PHGDH-231	ENST00000641939	LOR	P23490	312 aa	Predicted RBP	7.7	□□□□□ -1.18
PHGDH-231	ENST00000641939		H3BT86	120 aa		7.69	□□□□□ -1.18
PHGDH-231	ENST00000641939		A8MWP4	228 aa		7.67	□□□□□ -1.18
PHGDH-231	ENST00000641939	MTURN	Q8N3F0	131 aa		7.66	□□□□□ -1.18
PHGDH-231	ENST00000641939	NREP	Q16612	68 aa		7.65	□□□□□ -1.18
PHGDH-231	ENST00000641939	FSIP2	Q5CZC0	6907 aa		7.64	□□□□□ -1.19
PHGDH-231	ENST00000641939	C8orf17	Q9NRJ1	99 aa		7.64	□□□□□ -1.19
PHGDH-231	ENST00000641939	IGKV3D-7	A0A0C4DH55	119 aa		7.63	□□□□□ -1.19
PHGDH-231	ENST00000641939	ZCCHC13	Q8WW36	166 aa	Known RBP	7.62	□□□□□ -1.19
PHGDH-231	ENST00000641939	PRR15	Q8IV56	129 aa		7.61	□□□□□ -1.19
PHGDH-231	ENST00000641939		Q8N9P0	234 aa	Predicted RBP	7.61	□□□□□ -1.19
PHGDH-231	ENST00000641939	CRCT1	Q9UGL9	99 aa		7.61	□□□□□ -1.19
PHGDH-231	ENST00000641939	SPCS1	Q9Y6A9	102 aa		7.61	□□□□□ -1.19
PHGDH-231	ENST00000641939	HRES1	P13985	223 aa		7.6	□□□□□ -1.19
PHGDH-231	ENST00000641939	COL5A1-AS1	Q5SY13	56 aa		7.59	□□□□□ -1.19
PHGDH-231	ENST00000641939	FAM236D	A0A1B0GTK5	79 aa		7.58	□□□□□ -1.2
PHGDH-231	ENST00000641939	FAM236C	P0DP71	79 aa		7.58	□□□□□ -1.2
PHGDH-231	ENST00000641939	MPLKIP	Q8TAP9	179 aa		7.58	□□□□□ -1.2
PHGDH-231	ENST00000641939	RBM12B-AS1	Q9P1G2	102 aa		7.58	□□□□□ -1.2
PHGDH-231	ENST00000641939		Q6ZVQ6	151 aa		7.57	□□□□□ -1.2
PHGDH-231	ENST00000641939	SMCP	P49901	116 aa	Predicted RBP	7.54	□□□□□ -1.2
PHGDH-231	ENST00000641939	MMP24-AS1	A0A0U1RRL7	71 aa		7.53	□□□□□ -1.2
PHGDH-231	ENST00000641939	SPINK7	P58062	85 aa		7.53	□□□□□ -1.2
PHGDH-231	ENST00000641939		K7EQZ3	153 aa		7.52	□□□□□ -1.21
PHGDH-231	ENST00000641939	BPY2	O14599	106 aa		7.52	□□□□□ -1.21
PHGDH-231	ENST00000641939	TMEM254	Q8TBM7	123 aa		7.52	□□□□□ -1.21
PHGDH-231	ENST00000641939	MRPL34	Q9BQ48	92 aa	Known RBP	7.51	□□□□□ -1.21
PHGDH-231	ENST00000641939		K7EP34	96 aa		7.5	□□□□□ -1.21
PHGDH-231	ENST00000641939	PRO0461	Q9UI25	63 aa		7.5	□□□□□ -1.21
PHGDH-231	ENST00000641939	hDV103S1	A0JD37	113 aa		7.49	□□□□□ -1.21
PHGDH-231	ENST00000641939	NDUFS5	O43920	106 aa		7.45	□□□□□ -1.22
PHGDH-231	ENST00000641939	KRTAP9-8	Q9BYQ0	159 aa		7.45	□□□□□ -1.22
PHGDH-231	ENST00000641939	PCP4L1	A6NKN8	68 aa		7.43	□□□□□ -1.22
PHGDH-231	ENST00000641939	GTF2H5	Q6ZYL4	71 aa		7.43	□□□□□ -1.22
PHGDH-231	ENST00000641939	WFDC13	Q8IUB5	93 aa		7.43	□□□□□ -1.22
PHGDH-231	ENST00000641939		Q8N9L7	120 aa		7.43	□□□□□ -1.22
PHGDH-231	ENST00000641939	UBL5	Q9BZL1	73 aa		7.42	□□□□□ -1.22
PHGDH-231	ENST00000641939	LINC00846	Q9NV44	126 aa		7.41	□□□□□ -1.22
PHGDH-231	ENST00000641939	CASC2	Q6XLA1	102 aa		7.39	□□□□□ -1.23
PHGDH-231	ENST00000641939		F8W1H4	67 aa		7.37	□□□□□ -1.23
PHGDH-231	ENST00000641939	MT2A	P02795	61 aa		7.36	□□□□□ -1.23
PHGDH-231	ENST00000641939	HCG22	E2RYF7	251 aa		7.35	□□□□□ -1.23
PHGDH-231	ENST00000641939		Q5W150	140 aa		7.34	□□□□□ -1.23
PHGDH-231	ENST00000641939	ETDB	Q3ZM63	59 aa		7.33	□□□□□ -1.24
PHGDH-231	ENST00000641939	IGKV2D-30	A0A075B6S6	120 aa		7.32	□□□□□ -1.24
PHGDH-231	ENST00000641939	IGKV2-30	P06310	120 aa		7.32	□□□□□ -1.24
PHGDH-231	ENST00000641939	CXCL6	P80162	114 aa		7.31	□□□□□ -1.24
PHGDH-231	ENST00000641939	C7orf65	Q6ZTY9	151 aa		7.31	□□□□□ -1.24
PHGDH-231	ENST00000641939	MT1F	P04733	61 aa		7.3	□□□□□ -1.24
PHGDH-231	ENST00000641939	KRTAP10-10	P60014	251 aa		7.28	□□□□□ -1.24
PHGDH-231	ENST00000641939	H1FX-AS1	Q4G0G2	97 aa		7.27	□□□□□ -1.25
PHGDH-231	ENST00000641939	KRTAP9-3	Q9BYQ3	159 aa		7.22	□□□□□ -1.25
PHGDH-231	ENST00000641939	USH2A	O75445	5202 aa		7.21	□□□□□ -1.26
PHGDH-231	ENST00000641939	C4orf26	Q17RF5	130 aa		7.19	□□□□□ -1.26
PHGDH-231	ENST00000641939	TP53AIP1	Q9HCN2	124 aa		7.19	□□□□□ -1.26
PHGDH-231	ENST00000641939	LCE2B	O14633	110 aa		7.17	□□□□□ -1.26
PHGDH-231	ENST00000641939	ACYP1	P07311	99 aa		7.17	□□□□□ -1.26
PHGDH-231	ENST00000641939	SSPO	A2VEC9	5147 aa		7.15	□□□□□ -1.26
PHGDH-231	ENST00000641939	FAM240A	A0A1B0GVK7	77 aa		7.14	□□□□□ -1.27
PHGDH-231	ENST00000641939	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.1	□□□□□ -1.27
PHGDH-231	ENST00000641939	ATP5EP2	Q5VTU8	51 aa		7.1	□□□□□ -1.27
PHGDH-231	ENST00000641939	KRTAP9-7	A8MTY7	169 aa		7.08	□□□□□ -1.28
PHGDH-231	ENST00000641939	KRTAP3-1	Q9BYR8	98 aa		7.08	□□□□□ -1.28
PHGDH-231	ENST00000641939	C1orf64	Q8NEQ6	169 aa		7.07	□□□□□ -1.28
PHGDH-231	ENST00000641939	TRAV22	A0A0B4J277	110 aa		7.04	□□□□□ -1.28
PHGDH-231	ENST00000641939	HIST1H4A	P62805	103 aa	Known RBP	7.04	□□□□□ -1.28
PHGDH-231	ENST00000641939	C5orf47	Q569G3	176 aa		7.02	□□□□□ -1.29
PHGDH-231	ENST00000641939	KRTAP19-1	Q8IUB9	90 aa		7.02	□□□□□ -1.29
PHGDH-231	ENST00000641939	CYP4F30P	Q9H0H9	118 aa		7.02	□□□□□ -1.29
PHGDH-231	ENST00000641939		S4R3F8	94 aa		7.02	□□□□□ -1.29
PHGDH-231	ENST00000641939		A0A1B0GV90	55 aa		7.01	□□□□□ -1.29
PHGDH-231	ENST00000641939	LOC101927531	A0A1B0GV80	90 aa		7	□□□□□ -1.29
PHGDH-231	ENST00000641939	LINC00643	Q86TS7	51 aa		7	□□□□□ -1.29
PHGDH-231	ENST00000641939	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	6.97	□□□□□ -1.29
PHGDH-231	ENST00000641939	UQCRQ	O14949	82 aa		6.97	□□□□□ -1.29
PHGDH-231	ENST00000641939	CSAG1	Q6PB30	78 aa		6.97	□□□□□ -1.29
PHGDH-231	ENST00000641939	LCA10	Q71F78	164 aa		6.97	□□□□□ -1.29
PHGDH-231	ENST00000641939		A0A087WVE0	104 aa		6.95	□□□□□ -1.3
PHGDH-231	ENST00000641939	ATOX1	O00244	68 aa		6.94	□□□□□ -1.3
PHGDH-231	ENST00000641939		H0Y9P7	68 aa		6.93	□□□□□ -1.3
PHGDH-231	ENST00000641939	FAM236A	A0A1B0GUQ0	79 aa		6.92	□□□□□ -1.3
PHGDH-231	ENST00000641939	FAM236B	A0A1B0GV22	79 aa		6.92	□□□□□ -1.3
PHGDH-231	ENST00000641939	KRTAP19-6	Q3LI70	58 aa		6.91	□□□□□ -1.3
PHGDH-231	ENST00000641939	KRTAP3-3	Q9BYR6	98 aa		6.88	□□□□□ -1.31
PHGDH-231	ENST00000641939		J3QR89	54 aa		6.86	□□□□□ -1.31
PHGDH-231	ENST00000641939	LINC00208	Q96KT6	92 aa		6.83	□□□□□ -1.32

Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms