RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 Q5VSD8 79 aa5.63□□□□□ -1.51
PHGDH-215ENST00000641371 PRR26Q8N8Z3 221 aa5.62□□□□□ -1.51
PHGDH-215ENST00000641371 OCR1Q9BZK8 76 aa5.62□□□□□ -1.51
PHGDH-215ENST00000641371 C8orf17Q9NRJ1 99 aa5.62□□□□□ -1.51
PHGDH-215ENST00000641371 MMP24-AS1A0A0U1RRL7 71 aa5.61□□□□□ -1.51
PHGDH-215ENST00000641371 hDV103S1A0JD37 113 aa5.61□□□□□ -1.51
PHGDH-215ENST00000641371 KRTAP29-1A8MX34 341 aaPredicted RBP5.61□□□□□ -1.51
PHGDH-215ENST00000641371 TP53AIP1Q9HCN2 124 aa5.61□□□□□ -1.51
PHGDH-215ENST00000641371 HSPG2P98160 4391 aa5.61□□□□□ -1.51
PHGDH-215ENST00000641371 C5orf47Q569G3 176 aa5.6□□□□□ -1.51
PHGDH-215ENST00000641371 C1orf195Q5TG92 126 aa5.6□□□□□ -1.51
PHGDH-215ENST00000641371 TMEM254Q8TBM7 123 aa5.6□□□□□ -1.51
PHGDH-215ENST00000641371 IGHV6-1A0A0B4J1U7 121 aa5.59□□□□□ -1.51
PHGDH-215ENST00000641371 H3BPC8 53 aa5.59□□□□□ -1.51
PHGDH-215ENST00000641371 CCDC179H3BU77 68 aa5.59□□□□□ -1.51
PHGDH-215ENST00000641371 NDUFC1O43677 76 aa5.59□□□□□ -1.51
PHGDH-215ENST00000641371 WFDC13Q8IUB5 93 aa5.59□□□□□ -1.51
PHGDH-215ENST00000641371 Q8N1X5 172 aa5.59□□□□□ -1.51
PHGDH-215ENST00000641371 KLKP1Q107X0 134 aa5.58□□□□□ -1.52
PHGDH-215ENST00000641371 MRPL34Q9BQ48 92 aaKnown RBP5.57□□□□□ -1.52
PHGDH-215ENST00000641371 MP68P56378 58 aa5.56□□□□□ -1.52
PHGDH-215ENST00000641371 LINC00313P59037 77 aa5.56□□□□□ -1.52
PHGDH-215ENST00000641371 C20orf197Q8N268 126 aa5.55□□□□□ -1.52
PHGDH-215ENST00000641371 KIAA1109Q2LD37 5005 aa5.52□□□□□ -1.53
PHGDH-215ENST00000641371 KRTAP10-8P60410 259 aa5.52□□□□□ -1.53
PHGDH-215ENST00000641371 TMEM258P61165 79 aa5.52□□□□□ -1.53
PHGDH-215ENST00000641371 TRAV22A0A0B4J277 110 aa5.51□□□□□ -1.53
PHGDH-215ENST00000641371 A0A0U1RQV1 116 aa5.51□□□□□ -1.53
PHGDH-215ENST00000641371 OXTP01178 125 aa5.51□□□□□ -1.53
PHGDH-215ENST00000641371 NDUFS5O43920 106 aa5.5□□□□□ -1.53
PHGDH-215ENST00000641371 ATP5EP56381 51 aaPredicted RBP5.5□□□□□ -1.53
PHGDH-215ENST00000641371 H0Y9P7 68 aa5.49□□□□□ -1.53
PHGDH-215ENST00000641371 FP248Q71RG6 208 aaPredicted RBP5.49□□□□□ -1.53
PHGDH-215ENST00000641371 Q8N9P0 234 aaPredicted RBP5.49□□□□□ -1.53
PHGDH-215ENST00000641371 KRTAP4-5Q9BYR2 181 aa5.49□□□□□ -1.53
PHGDH-215ENST00000641371 ABCA13Q86UQ4 5058 aa5.46□□□□□ -1.53
PHGDH-215ENST00000641371 TNXBP22105 4242 aa5.46□□□□□ -1.54
PHGDH-215ENST00000641371 H7BZZ5 65 aa5.46□□□□□ -1.54
PHGDH-215ENST00000641371 ZCCHC13Q8WW36 166 aaKnown RBP5.46□□□□□ -1.54
PHGDH-215ENST00000641371 SNURFQ9Y675 71 aa5.46□□□□□ -1.54
PHGDH-215ENST00000641371 FAT3Q8TDW7 4589 aa5.45□□□□□ -1.54
PHGDH-215ENST00000641371 NOTCH2NLQ7Z3S9 236 aa5.45□□□□□ -1.54
PHGDH-215ENST00000641371 LOC101927531A0A1B0GV80 90 aa5.44□□□□□ -1.54
PHGDH-215ENST00000641371 LINC00208Q96KT6 92 aa5.44□□□□□ -1.54
PHGDH-215ENST00000641371 FLG2Q5D862 2391 aaPredicted RBP5.43□□□□□ -1.54
PHGDH-215ENST00000641371 KRTAP16-1A8MUX0 517 aa5.43□□□□□ -1.54
PHGDH-215ENST00000641371 C1orf64Q8NEQ6 169 aa5.43□□□□□ -1.54
PHGDH-215ENST00000641371 FAM236DA0A1B0GTK5 79 aa5.42□□□□□ -1.54
PHGDH-215ENST00000641371 FAM236CP0DP71 79 aa5.42□□□□□ -1.54
PHGDH-215ENST00000641371 SPANXA2-OT1Q8N9U9 137 aa5.41□□□□□ -1.54
PHGDH-215ENST00000641371 C20orf166-AS1Q96NR2 134 aa5.39□□□□□ -1.55
PHGDH-215ENST00000641371 CYSTM1Q9H1C7 97 aa5.39□□□□□ -1.55
PHGDH-215ENST00000641371 MT1HL1P0DM35 61 aa5.38□□□□□ -1.55
PHGDH-215ENST00000641371 RPS28P62857 69 aaKnown RBP5.38□□□□□ -1.55
PHGDH-215ENST00000641371 A8MUU9 505 aa5.37□□□□□ -1.55
PHGDH-215ENST00000641371 KRTAP13-3Q3SY46 172 aa5.37□□□□□ -1.55
PHGDH-215ENST00000641371 LRP1Q07954 4544 aaKnown RBP5.37□□□□□ -1.55
PHGDH-215ENST00000641371 Q75L30 129 aa5.35□□□□□ -1.55
PHGDH-215ENST00000641371 CYP4F30PQ9H0H9 118 aa5.35□□□□□ -1.55
PHGDH-215ENST00000641371 DMBT1Q9UGM3 2413 aaPredicted RBP5.35□□□□□ -1.55
PHGDH-215ENST00000641371 IGLV7-46A0A075B6I9 117 aa5.34□□□□□ -1.55
PHGDH-215ENST00000641371 Q5W150 140 aa5.34□□□□□ -1.55
PHGDH-215ENST00000641371 RETNLBQ9BQ08 111 aa5.34□□□□□ -1.55
PHGDH-215ENST00000641371 SERP1Q9Y6X1 66 aa5.34□□□□□ -1.55
PHGDH-215ENST00000641371 HERC1Q15751 4861 aa5.33□□□□□ -1.56
PHGDH-215ENST00000641371 IGKV2-30P06310 120 aa5.33□□□□□ -1.56
PHGDH-215ENST00000641371 C9orf92A6NGG3 77 aa5.32□□□□□ -1.56
PHGDH-215ENST00000641371 C7orf65Q6ZTY9 151 aa5.31□□□□□ -1.56
PHGDH-215ENST00000641371 J3QL48 77 aa5.29□□□□□ -1.56
PHGDH-215ENST00000641371 TPRXLQ17RH7 258 aa5.29□□□□□ -1.56
PHGDH-215ENST00000641371 MYCBP2O75592 4640 aa5.28□□□□□ -1.56
PHGDH-215ENST00000641371 PRR4Q16378 134 aa5.27□□□□□ -1.57
PHGDH-215ENST00000641371 PCOTHQ58A44 107 aa5.27□□□□□ -1.57
PHGDH-215ENST00000641371 ATP11AUNQ6ZP68 121 aa5.27□□□□□ -1.57
PHGDH-215ENST00000641371 RPL37P61927 97 aaKnown RBP5.26□□□□□ -1.57
PHGDH-215ENST00000641371 IGKV2D-30A0A075B6S6 120 aa5.25□□□□□ -1.57
PHGDH-215ENST00000641371 A8MUN3 132 aa5.22□□□□□ -1.57
PHGDH-215ENST00000641371 HRES1P13985 223 aa5.22□□□□□ -1.57
PHGDH-215ENST00000641371 ACYP2P14621 99 aa5.22□□□□□ -1.57
PHGDH-215ENST00000641371 XP32Q5T750 250 aa5.22□□□□□ -1.57
PHGDH-215ENST00000641371 SMIM26A0A096LP01 95 aa5.21□□□□□ -1.58
PHGDH-215ENST00000641371 UBR4Q5T4S7 5183 aa5.21□□□□□ -1.58
PHGDH-215ENST00000641371 DMAC1Q96GE9 116 aa5.2□□□□□ -1.58
PHGDH-215ENST00000641371 SPINK7P58062 85 aa5.18□□□□□ -1.58
PHGDH-215ENST00000641371 V9GYY9 64 aa5.17□□□□□ -1.58
PHGDH-215ENST00000641371 COA5Q86WW8 74 aa5.16□□□□□ -1.58
PHGDH-215ENST00000641371 CHKB-CPT1BH3BT56 60 aa5.13□□□□□ -1.59
PHGDH-215ENST00000641371 SEC61BP60468 96 aaKnown RBP5.13□□□□□ -1.59
PHGDH-215ENST00000641371 COX6B2Q6YFQ2 88 aa5.1□□□□□ -1.59
PHGDH-215ENST00000641371 SPTSSBQ8NFR3 76 aa5.1□□□□□ -1.59
PHGDH-215ENST00000641371 Q1T7F1 81 aa5.09□□□□□ -1.59
PHGDH-215ENST00000641371 C4orf26Q17RF5 130 aa5.08□□□□□ -1.6
PHGDH-215ENST00000641371 RBM12B-AS1Q9P1G2 102 aa5.04□□□□□ -1.6
PHGDH-215ENST00000641371 MPLKIPQ8TAP9 179 aa5.01□□□□□ -1.61
PHGDH-215ENST00000641371 LINC01558Q9Y6Z2 57 aa5.01□□□□□ -1.61
PHGDH-215ENST00000641371 PRR15LQ9BU68 103 aa5□□□□□ -1.61
PHGDH-215ENST00000641371 MUC17Q685J3 4493 aa4.99□□□□□ -1.61
PHGDH-215ENST00000641371 LRP2P98164 4655 aa4.99□□□□□ -1.61
PHGDH-215ENST00000641371 KRTAP3-1Q9BYR8 98 aa4.98□□□□□ -1.61
PHGDH-215ENST00000641371 H1FX-AS1Q4G0G2 97 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms