RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-238ENST00000640859 MMP24-AS1A0A0U1RRL7 71 aa6.59□□□□□ -1.35
GFAP-238ENST00000640859 H7BZZ5 65 aa6.59□□□□□ -1.35
GFAP-238ENST00000640859 NDUFB1O75438 58 aa6.59□□□□□ -1.35
GFAP-238ENST00000640859 KRTAP13-2Q52LG2 175 aa6.59□□□□□ -1.35
GFAP-238ENST00000640859 KIAA1109Q2LD37 5005 aa6.58□□□□□ -1.36
GFAP-238ENST00000640859 A0A087X002 238 aa6.58□□□□□ -1.36
GFAP-238ENST00000640859 KRTAP1-4P0C5Y4 121 aa6.58□□□□□ -1.36
GFAP-238ENST00000640859 CASC2Q6XLA1 102 aa6.58□□□□□ -1.36
GFAP-238ENST00000640859 NDUFC1O43677 76 aa6.57□□□□□ -1.36
GFAP-238ENST00000640859 ASB16-AS1Q495Z4 193 aa6.56□□□□□ -1.36
GFAP-238ENST00000640859 A0A1B0GVX0 72 aa6.55□□□□□ -1.36
GFAP-238ENST00000640859 C5orf47Q569G3 176 aa6.55□□□□□ -1.36
GFAP-238ENST00000640859 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
GFAP-238ENST00000640859 C8orf17Q9NRJ1 99 aa6.55□□□□□ -1.36
GFAP-238ENST00000640859 ZCCHC13Q8WW36 166 aaKnown RBP6.54□□□□□ -1.36
GFAP-238ENST00000640859 APOBP04114 4563 aaKnown RBP6.53□□□□□ -1.36
GFAP-238ENST00000640859 hDV103S1A0JD37 113 aa6.53□□□□□ -1.36
GFAP-238ENST00000640859 RPS28P62857 69 aaKnown RBP6.53□□□□□ -1.36
GFAP-238ENST00000640859 Q5XG85 94 aa6.53□□□□□ -1.36
GFAP-238ENST00000640859 RYR1P21817 5038 aa6.53□□□□□ -1.36
GFAP-238ENST00000640859 FAM236DA0A1B0GTK5 79 aa6.52□□□□□ -1.37
GFAP-238ENST00000640859 FAM236CP0DP71 79 aa6.52□□□□□ -1.37
GFAP-238ENST00000640859 SPINK6Q6UWN8 80 aa6.52□□□□□ -1.37
GFAP-238ENST00000640859 IGHV6-1A0A0B4J1U7 121 aa6.51□□□□□ -1.37
GFAP-238ENST00000640859 HSPG2P98160 4391 aa6.5□□□□□ -1.37
GFAP-238ENST00000640859 NOTCH2NLQ7Z3S9 236 aa6.49□□□□□ -1.37
GFAP-238ENST00000640859 HERC2O95714 4834 aa6.49□□□□□ -1.37
GFAP-238ENST00000640859 H3BPC8 53 aa6.47□□□□□ -1.37
GFAP-238ENST00000640859 MP68P56378 58 aa6.47□□□□□ -1.37
GFAP-238ENST00000640859 ATP5EP56381 51 aaPredicted RBP6.47□□□□□ -1.37
GFAP-238ENST00000640859 KRTAP10-4P60372 401 aaPredicted RBP6.47□□□□□ -1.37
GFAP-238ENST00000640859 C1orf195Q5TG92 126 aa6.47□□□□□ -1.37
GFAP-238ENST00000640859 KRTAP19-1Q8IUB9 90 aa6.47□□□□□ -1.37
GFAP-238ENST00000640859 H0Y9P7 68 aa6.46□□□□□ -1.38
GFAP-238ENST00000640859 TYMSOSQ8TAI1 123 aa6.46□□□□□ -1.38
GFAP-238ENST00000640859 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.38
GFAP-238ENST00000640859 KRTAP4-12Q9BQ66 201 aa6.46□□□□□ -1.38
GFAP-238ENST00000640859 KRTAP4-5Q9BYR2 181 aa6.46□□□□□ -1.38
GFAP-238ENST00000640859 VPS13BQ7Z7G8 4022 aa6.45□□□□□ -1.38
GFAP-238ENST00000640859 C8orf87E5RJ46 101 aa6.45□□□□□ -1.38
GFAP-238ENST00000640859 OXTP01178 125 aa6.45□□□□□ -1.38
GFAP-238ENST00000640859 KRTAP19-4Q3LI73 84 aa6.45□□□□□ -1.38
GFAP-238ENST00000640859 TP53AIP1Q9HCN2 124 aa6.45□□□□□ -1.38
GFAP-238ENST00000640859 LINC00208Q96KT6 92 aa6.44□□□□□ -1.38
GFAP-238ENST00000640859 LIMD2Q9BT23 127 aa6.44□□□□□ -1.38
GFAP-238ENST00000640859 SERP1Q9Y6X1 66 aa6.44□□□□□ -1.38
GFAP-238ENST00000640859 FAT1Q14517 4588 aa6.43□□□□□ -1.38
GFAP-238ENST00000640859 TRAV22A0A0B4J277 110 aa6.42□□□□□ -1.38
GFAP-238ENST00000640859 PRR26Q8N8Z3 221 aa6.42□□□□□ -1.38
GFAP-238ENST00000640859 SPINK1P00995 79 aa6.41□□□□□ -1.38
GFAP-238ENST00000640859 KRTAP17-1Q9BYP8 105 aa6.41□□□□□ -1.38
GFAP-238ENST00000640859 KRTAP9-2Q9BYQ4 174 aa6.41□□□□□ -1.38
GFAP-238ENST00000640859 C1orf64Q8NEQ6 169 aa6.4□□□□□ -1.38
GFAP-238ENST00000640859 FLG2Q5D862 2391 aaPredicted RBP6.4□□□□□ -1.39
GFAP-238ENST00000640859 NDUFS5O43920 106 aa6.39□□□□□ -1.39
GFAP-238ENST00000640859 LINC00313P59037 77 aa6.38□□□□□ -1.39
GFAP-238ENST00000640859 RPS29P62273 56 aaKnown RBP6.38□□□□□ -1.39
GFAP-238ENST00000640859 SPAG11AQ6PDA7 123 aa6.38□□□□□ -1.39
GFAP-238ENST00000640859 LINC00304Q8N9R0 145 aa6.38□□□□□ -1.39
GFAP-238ENST00000640859 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.37□□□□□ -1.39
GFAP-238ENST00000640859 DMBT1Q9UGM3 2413 aaPredicted RBP6.37□□□□□ -1.39
GFAP-238ENST00000640859 KRTAP9-6A0A140TA67 174 aa6.36□□□□□ -1.39
GFAP-238ENST00000640859 CYP4F30PQ9H0H9 118 aa6.36□□□□□ -1.39
GFAP-238ENST00000640859 KRTAP16-1A8MUX0 517 aa6.35□□□□□ -1.39
GFAP-238ENST00000640859 KRTAP13-3Q3SY46 172 aa6.35□□□□□ -1.39
GFAP-238ENST00000640859 Q5W150 140 aa6.34□□□□□ -1.39
GFAP-238ENST00000640859 Q8N9P0 234 aaPredicted RBP6.34□□□□□ -1.39
GFAP-238ENST00000640859 SPANXA2-OT1Q8N9U9 137 aa6.34□□□□□ -1.39
GFAP-238ENST00000640859 ABCA13Q86UQ4 5058 aa6.32□□□□□ -1.4
GFAP-238ENST00000640859 PKHD1L1Q86WI1 4243 aa6.31□□□□□ -1.4
GFAP-238ENST00000640859 SMIM26A0A096LP01 95 aa6.3□□□□□ -1.4
GFAP-238ENST00000640859 PRR4Q16378 134 aa6.29□□□□□ -1.4
GFAP-238ENST00000640859 PCLOQ9Y6V0 5065 aa6.29□□□□□ -1.4
GFAP-238ENST00000640859 MYCBP2O75592 4640 aa6.28□□□□□ -1.4
GFAP-238ENST00000640859 IGLV7-46A0A075B6I9 117 aa6.28□□□□□ -1.4
GFAP-238ENST00000640859 LOC101927531A0A1B0GV80 90 aa6.28□□□□□ -1.4
GFAP-238ENST00000640859 PCOTHQ58A44 107 aa6.27□□□□□ -1.41
GFAP-238ENST00000640859 FP248Q71RG6 208 aaPredicted RBP6.26□□□□□ -1.41
GFAP-238ENST00000640859 KRTAP10-8P60410 259 aa6.25□□□□□ -1.41
GFAP-238ENST00000640859 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
GFAP-238ENST00000640859 IGKV2-30P06310 120 aa6.22□□□□□ -1.41
GFAP-238ENST00000640859 MT1HL1P0DM35 61 aa6.22□□□□□ -1.41
GFAP-238ENST00000640859 RETNLBQ9BQ08 111 aa6.22□□□□□ -1.41
GFAP-238ENST00000640859 C4orf26Q17RF5 130 aa6.2□□□□□ -1.42
GFAP-238ENST00000640859 LRP1Q07954 4544 aaKnown RBP6.18□□□□□ -1.42
GFAP-238ENST00000640859 A8MUU9 505 aa6.15□□□□□ -1.42
GFAP-238ENST00000640859 HRES1P13985 223 aa6.15□□□□□ -1.42
GFAP-238ENST00000640859 COA5Q86WW8 74 aa6.15□□□□□ -1.42
GFAP-238ENST00000640859 C20orf166-AS1Q96NR2 134 aa6.15□□□□□ -1.42
GFAP-238ENST00000640859 C9orf92A6NGG3 77 aa6.14□□□□□ -1.43
GFAP-238ENST00000640859 KRTAP3-1Q9BYR8 98 aa6.14□□□□□ -1.43
GFAP-238ENST00000640859 Q1T7F1 81 aa6.13□□□□□ -1.43
GFAP-238ENST00000640859 MPLKIPQ8TAP9 179 aa6.13□□□□□ -1.43
GFAP-238ENST00000640859 FAT3Q8TDW7 4589 aa6.13□□□□□ -1.43
GFAP-238ENST00000640859 LCE4AQ5TA78 99 aa6.12□□□□□ -1.43
GFAP-238ENST00000640859 IGKV2D-30A0A075B6S6 120 aa6.11□□□□□ -1.43
GFAP-238ENST00000640859 TNXBP22105 4242 aa6.11□□□□□ -1.43
GFAP-238ENST00000640859 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.43
GFAP-238ENST00000640859 DMAC1Q96GE9 116 aa6.09□□□□□ -1.43
GFAP-238ENST00000640859 KRTAP9-9Q9BYP9 154 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms