RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 NAA38Q9BRA0 125 aaKnown RBP12.78□□□□□ -0.36
VEGFA-230ENST00000640482 JMJD7-PLA2G4BH0Y9G9 81 aa12.77□□□□□ -0.37
VEGFA-230ENST00000640482 Q6ZQT0 140 aa12.77□□□□□ -0.37
VEGFA-230ENST00000640482 FAM236DA0A1B0GTK5 79 aa12.75□□□□□ -0.37
VEGFA-230ENST00000640482 SMIM6P0DI80 62 aa12.75□□□□□ -0.37
VEGFA-230ENST00000640482 FAM236CP0DP71 79 aa12.75□□□□□ -0.37
VEGFA-230ENST00000640482 RBM12B-AS1Q9P1G2 102 aa12.72□□□□□ -0.37
VEGFA-230ENST00000640482 A0A1B0GW54 56 aa12.71□□□□□ -0.37
VEGFA-230ENST00000640482 LOC110117498A0A087WWA1 95 aa12.7□□□□□ -0.38
VEGFA-230ENST00000640482 NDUFB1O75438 58 aa12.7□□□□□ -0.38
VEGFA-230ENST00000640482 LYRM7Q5U5X0 104 aa12.7□□□□□ -0.38
VEGFA-230ENST00000640482 HRES1P13985 223 aa12.69□□□□□ -0.38
VEGFA-230ENST00000640482 PDE6GP18545 87 aa12.69□□□□□ -0.38
VEGFA-230ENST00000640482 MPLKIPQ8TAP9 179 aa12.67□□□□□ -0.38
VEGFA-230ENST00000640482 ZCCHC13Q8WW36 166 aaKnown RBP12.64□□□□□ -0.39
VEGFA-230ENST00000640482 TSTD3H0UI37 97 aa12.63□□□□□ -0.39
VEGFA-230ENST00000640482 C14orf132Q9NPU4 83 aa12.62□□□□□ -0.39
VEGFA-230ENST00000640482 A8MWP4 228 aa12.61□□□□□ -0.39
VEGFA-230ENST00000640482 KRTAP9-8Q9BYQ0 159 aa12.61□□□□□ -0.39
VEGFA-230ENST00000640482 BATFQ16520 125 aa12.59□□□□□ -0.39
VEGFA-230ENST00000640482 Q8N9P0 234 aaPredicted RBP12.58□□□□□ -0.4
VEGFA-230ENST00000640482 C8orf17Q9NRJ1 99 aa12.58□□□□□ -0.4
VEGFA-230ENST00000640482 MTURNQ8N3F0 131 aa12.56□□□□□ -0.4
VEGFA-230ENST00000640482 IGKV3D-7A0A0C4DH55 119 aa12.54□□□□□ -0.4
VEGFA-230ENST00000640482 SPINK7P58062 85 aa12.53□□□□□ -0.4
VEGFA-230ENST00000640482 NREPQ16612 68 aa12.53□□□□□ -0.4
VEGFA-230ENST00000640482 Q6ZVQ6 151 aa12.49□□□□□ -0.41
VEGFA-230ENST00000640482 PRR15Q8IV56 129 aa12.48□□□□□ -0.41
VEGFA-230ENST00000640482 C9orf118A6NHY6 69 aa12.47□□□□□ -0.41
VEGFA-230ENST00000640482 H3BT86 120 aa12.46□□□□□ -0.41
VEGFA-230ENST00000640482 MT2AP02795 61 aa12.43□□□□□ -0.42
VEGFA-230ENST00000640482 A0A1W2PPM0 123 aa12.42□□□□□ -0.42
VEGFA-230ENST00000640482 TAX1BP3O14907 124 aa12.41□□□□□ -0.42
VEGFA-230ENST00000640482 TMEM254Q8TBM7 123 aa12.39□□□□□ -0.43
VEGFA-230ENST00000640482 MMP24-AS1A0A0U1RRL7 71 aa12.38□□□□□ -0.43
VEGFA-230ENST00000640482 MRPL34Q9BQ48 92 aaKnown RBP12.38□□□□□ -0.43
VEGFA-230ENST00000640482 LOC105371267A0A1B0GV96 52 aa12.36□□□□□ -0.43
VEGFA-230ENST00000640482 WFDC13Q8IUB5 93 aa12.36□□□□□ -0.43
VEGFA-230ENST00000640482 K7EQZ3 153 aa12.33□□□□□ -0.44
VEGFA-230ENST00000640482 MT1FP04733 61 aa12.33□□□□□ -0.44
VEGFA-230ENST00000640482 hDV103S1A0JD37 113 aa12.32□□□□□ -0.44
VEGFA-230ENST00000640482 KRTAP10-10P60014 251 aa12.31□□□□□ -0.44
VEGFA-230ENST00000640482 BPY2O14599 106 aa12.29□□□□□ -0.44
VEGFA-230ENST00000640482 NDUFS5O43920 106 aa12.28□□□□□ -0.44
VEGFA-230ENST00000640482 USH2AO75445 5202 aa12.25□□□□□ -0.45
VEGFA-230ENST00000640482 SPCS1Q9Y6A9 102 aa12.24□□□□□ -0.45
VEGFA-230ENST00000640482 KRTAP9-3Q9BYQ3 159 aa12.22□□□□□ -0.45
VEGFA-230ENST00000640482 LCE2BO14633 110 aa12.17□□□□□ -0.46
VEGFA-230ENST00000640482 SMCPP49901 116 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-230ENST00000640482 Q8N9L7 120 aa12.13□□□□□ -0.47
VEGFA-230ENST00000640482 SSPOA2VEC9 5147 aa12.13□□□□□ -0.47
VEGFA-230ENST00000640482 CASC2Q6XLA1 102 aa12.12□□□□□ -0.47
VEGFA-230ENST00000640482 IGKV2D-30A0A075B6S6 120 aa12.11□□□□□ -0.47
VEGFA-230ENST00000640482 IGKV2-30P06310 120 aa12.11□□□□□ -0.47
VEGFA-230ENST00000640482 H1FX-AS1Q4G0G2 97 aa12.1□□□□□ -0.47
VEGFA-230ENST00000640482 COL5A1-AS1Q5SY13 56 aa12.1□□□□□ -0.47
VEGFA-230ENST00000640482 C7orf65Q6ZTY9 151 aa12.1□□□□□ -0.47
VEGFA-230ENST00000640482 Q5W150 140 aa12.08□□□□□ -0.48
VEGFA-230ENST00000640482 HCG22E2RYF7 251 aa12.07□□□□□ -0.48
VEGFA-230ENST00000640482 UBL5Q9BZL1 73 aa12.05□□□□□ -0.48
VEGFA-230ENST00000640482 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.03□□□□□ -0.48
VEGFA-230ENST00000640482 PRO0461Q9UI25 63 aa12.03□□□□□ -0.48
VEGFA-230ENST00000640482 K7EP34 96 aa12.02□□□□□ -0.49
VEGFA-230ENST00000640482 LINC00846Q9NV44 126 aa12.02□□□□□ -0.49
VEGFA-230ENST00000640482 CXCL6P80162 114 aa12.01□□□□□ -0.49
VEGFA-230ENST00000640482 KRTAP19-1Q8IUB9 90 aa12.01□□□□□ -0.49
VEGFA-230ENST00000640482 KRTAP9-7A8MTY7 169 aa11.91□□□□□ -0.5
VEGFA-230ENST00000640482 FCGBPQ9Y6R7 5405 aaPredicted RBP11.9□□□□□ -0.5
VEGFA-230ENST00000640482 C4orf26Q17RF5 130 aa11.89□□□□□ -0.51
VEGFA-230ENST00000640482 GTF2H5Q6ZYL4 71 aa11.89□□□□□ -0.51
VEGFA-230ENST00000640482 F8W1H4 67 aa11.81□□□□□ -0.52
VEGFA-230ENST00000640482 KRTAP19-6Q3LI70 58 aa11.78□□□□□ -0.52
VEGFA-230ENST00000640482 TP53AIP1Q9HCN2 124 aa11.77□□□□□ -0.53
VEGFA-230ENST00000640482 ETDBQ3ZM63 59 aa11.75□□□□□ -0.53
VEGFA-230ENST00000640482 PCP4L1A6NKN8 68 aa11.7□□□□□ -0.54
VEGFA-230ENST00000640482 C5orf47Q569G3 176 aa11.69□□□□□ -0.54
VEGFA-230ENST00000640482 C1orf64Q8NEQ6 169 aa11.68□□□□□ -0.54
VEGFA-230ENST00000640482 KRTAP3-1Q9BYR8 98 aa11.68□□□□□ -0.54
VEGFA-230ENST00000640482 S4R3F8 94 aa11.67□□□□□ -0.54
VEGFA-230ENST00000640482 FAM236AA0A1B0GUQ0 79 aa11.6□□□□□ -0.55
VEGFA-230ENST00000640482 FAM236BA0A1B0GV22 79 aa11.6□□□□□ -0.55
VEGFA-230ENST00000640482 CSAG1Q6PB30 78 aa11.6□□□□□ -0.55
VEGFA-230ENST00000640482 LCA10Q71F78 164 aa11.56□□□□□ -0.56
VEGFA-230ENST00000640482 ACYP1P07311 99 aa11.55□□□□□ -0.56
VEGFA-230ENST00000640482 CYP4F30PQ9H0H9 118 aa11.51□□□□□ -0.57
VEGFA-230ENST00000640482 MACF1Q9UPN3 7388 aaKnown RBP11.51□□□□□ -0.57
VEGFA-230ENST00000640482 TRAV22A0A0B4J277 110 aa11.49□□□□□ -0.57
VEGFA-230ENST00000640482 ATP5EP2Q5VTU8 51 aa11.47□□□□□ -0.57
VEGFA-230ENST00000640482 FAM240AA0A1B0GVK7 77 aa11.46□□□□□ -0.57
VEGFA-230ENST00000640482 LOC101927531A0A1B0GV80 90 aa11.45□□□□□ -0.58
VEGFA-230ENST00000640482 HIST1H4AP62805 103 aaKnown RBP11.4□□□□□ -0.58
VEGFA-230ENST00000640482 KRTAP3-3Q9BYR6 98 aa11.37□□□□□ -0.59
VEGFA-230ENST00000640482 SPRR2GQ9BYE4 73 aa11.36□□□□□ -0.59
VEGFA-230ENST00000640482 UQCRQO14949 82 aa11.35□□□□□ -0.59
VEGFA-230ENST00000640482 Q5VV11 94 aa11.35□□□□□ -0.59
VEGFA-230ENST00000640482 SYNE2Q8WXH0 6885 aaKnown RBP11.34□□□□□ -0.59
VEGFA-230ENST00000640482 KLKP1Q107X0 134 aa11.33□□□□□ -0.6
VEGFA-230ENST00000640482 ATOX1O00244 68 aa11.32□□□□□ -0.6
VEGFA-230ENST00000640482 H0Y9P7 68 aa11.3□□□□□ -0.6
VEGFA-230ENST00000640482 MT1BP07438 61 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms