RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 A0A087X002 238 aa11.14□□□□□ -0.63
CROCCP2-206ENST00000639594 NOTCH2NLQ7Z3S9 236 aa11.14□□□□□ -0.63
CROCCP2-206ENST00000639594 KMT2CQ8NEZ4 4911 aaKnown RBP11.13□□□□□ -0.63
CROCCP2-206ENST00000639594 TP53AIP1Q9HCN2 124 aa11.13□□□□□ -0.63
CROCCP2-206ENST00000639594 LINC00336Q6ZUF6 198 aa11.12□□□□□ -0.63
CROCCP2-206ENST00000639594 SPANXA2-OT1Q8N9U9 137 aa11.12□□□□□ -0.63
CROCCP2-206ENST00000639594 RYR2Q92736 4967 aa11.1□□□□□ -0.63
CROCCP2-206ENST00000639594 SPINK6Q6UWN8 80 aa11.1□□□□□ -0.63
CROCCP2-206ENST00000639594 NDUFS5O43920 106 aa11.1□□□□□ -0.63
CROCCP2-206ENST00000639594 MRPL34Q9BQ48 92 aaKnown RBP11.09□□□□□ -0.63
CROCCP2-206ENST00000639594 KRTAP10-1P60331 282 aa11.09□□□□□ -0.63
CROCCP2-206ENST00000639594 SSBP3-AS1Q7Z2R9 100 aa11.07□□□□□ -0.64
CROCCP2-206ENST00000639594 CD164Q04900 197 aa11.07□□□□□ -0.64
CROCCP2-206ENST00000639594 Q6ZSA8 131 aa11.06□□□□□ -0.64
CROCCP2-206ENST00000639594 PCOTHQ58A44 107 aa11.03□□□□□ -0.64
CROCCP2-206ENST00000639594 Q1T7F1 81 aa11.03□□□□□ -0.64
CROCCP2-206ENST00000639594 PKHD1P08F94 4074 aa11.02□□□□□ -0.64
CROCCP2-206ENST00000639594 KRTAP13-2Q52LG2 175 aa11□□□□□ -0.65
CROCCP2-206ENST00000639594 IGLV7-46A0A075B6I9 117 aa11□□□□□ -0.65
CROCCP2-206ENST00000639594 LRP1BQ9NZR2 4599 aa10.98□□□□□ -0.65
CROCCP2-206ENST00000639594 PRO0628Q9UI54 55 aa10.95□□□□□ -0.66
CROCCP2-206ENST00000639594 Q5W150 140 aa10.93□□□□□ -0.66
CROCCP2-206ENST00000639594 BRK1Q8WUW1 75 aa10.93□□□□□ -0.66
CROCCP2-206ENST00000639594 PSPHP1O15172 72 aa10.91□□□□□ -0.66
CROCCP2-206ENST00000639594 DYNC1H1Q14204 4646 aaKnown RBP10.91□□□□□ -0.66
CROCCP2-206ENST00000639594 C8orf87E5RJ46 101 aa10.9□□□□□ -0.66
CROCCP2-206ENST00000639594 COA5Q86WW8 74 aa10.9□□□□□ -0.66
CROCCP2-206ENST00000639594 KRTAP1-4P0C5Y4 121 aa10.9□□□□□ -0.66
CROCCP2-206ENST00000639594 RYR3Q15413 4870 aa10.89□□□□□ -0.67
CROCCP2-206ENST00000639594 KRTAP13-3Q3SY46 172 aa10.89□□□□□ -0.67
CROCCP2-206ENST00000639594 VPS13BQ7Z7G8 4022 aa10.89□□□□□ -0.67
CROCCP2-206ENST00000639594 C1orf195Q5TG92 126 aa10.89□□□□□ -0.67
CROCCP2-206ENST00000639594 Q8N9P0 234 aaPredicted RBP10.87□□□□□ -0.67
CROCCP2-206ENST00000639594 LINC00313P59037 77 aa10.86□□□□□ -0.67
CROCCP2-206ENST00000639594 V9GYY9 64 aa10.85□□□□□ -0.67
CROCCP2-206ENST00000639594 LOC101927531A0A1B0GV80 90 aa10.84□□□□□ -0.67
CROCCP2-206ENST00000639594 A0A1B0GVY2 172 aa10.83□□□□□ -0.68
CROCCP2-206ENST00000639594 A8MUN3 132 aa10.83□□□□□ -0.68
CROCCP2-206ENST00000639594 PLA2G1BP04054 148 aaKnown RBP10.79□□□□□ -0.68
CROCCP2-206ENST00000639594 HRES1P13985 223 aa10.77□□□□□ -0.69
CROCCP2-206ENST00000639594 LIMD2Q9BT23 127 aa10.77□□□□□ -0.69
CROCCP2-206ENST00000639594 APOBP04114 4563 aaKnown RBP10.76□□□□□ -0.69
CROCCP2-206ENST00000639594 Q5VV11 94 aa10.76□□□□□ -0.69
CROCCP2-206ENST00000639594 RETNLBQ9BQ08 111 aa10.76□□□□□ -0.69
CROCCP2-206ENST00000639594 TYMSOSQ8TAI1 123 aa10.75□□□□□ -0.69
CROCCP2-206ENST00000639594 KRTAP16-1A8MUX0 517 aa10.74□□□□□ -0.69
CROCCP2-206ENST00000639594 FAM229AH3BQW9 127 aa10.72□□□□□ -0.69
CROCCP2-206ENST00000639594 C4orf48Q5BLP8 95 aa10.72□□□□□ -0.69
CROCCP2-206ENST00000639594 PRR15LQ9BU68 103 aa10.72□□□□□ -0.69
CROCCP2-206ENST00000639594 FAT1Q14517 4588 aa10.68□□□□□ -0.7
CROCCP2-206ENST00000639594 SPINK1P00995 79 aa10.66□□□□□ -0.7
CROCCP2-206ENST00000639594 SPAG11AQ6PDA7 123 aa10.66□□□□□ -0.7
CROCCP2-206ENST00000639594 CHKB-CPT1BH3BT56 60 aa10.65□□□□□ -0.71
CROCCP2-206ENST00000639594 IGKV2-30P06310 120 aa10.65□□□□□ -0.71
CROCCP2-206ENST00000639594 PRR26Q8N8Z3 221 aa10.65□□□□□ -0.71
CROCCP2-206ENST00000639594 SMR3BP02814 79 aaPredicted RBP10.63□□□□□ -0.71
CROCCP2-206ENST00000639594 LINC01558Q9Y6Z2 57 aa10.62□□□□□ -0.71
CROCCP2-206ENST00000639594 ACYP2P14621 99 aa10.6□□□□□ -0.71
CROCCP2-206ENST00000639594 Q75L30 129 aa10.6□□□□□ -0.71
CROCCP2-206ENST00000639594 A8MU10 97 aa10.59□□□□□ -0.71
CROCCP2-206ENST00000639594 LINC00304Q8N9R0 145 aa10.59□□□□□ -0.71
CROCCP2-206ENST00000639594 DMAC1Q96GE9 116 aa10.58□□□□□ -0.72
CROCCP2-206ENST00000639594 IGKV2D-30A0A075B6S6 120 aa10.53□□□□□ -0.72
CROCCP2-206ENST00000639594 RPS29P62273 56 aaKnown RBP10.52□□□□□ -0.72
CROCCP2-206ENST00000639594 EPPK1P58107 5090 aaKnown RBP10.51□□□□□ -0.73
CROCCP2-206ENST00000639594 A6NED7 52 aa10.5□□□□□ -0.73
CROCCP2-206ENST00000639594 HSPG2P98160 4391 aa10.49□□□□□ -0.73
CROCCP2-206ENST00000639594 KRTAP10-4P60372 401 aaPredicted RBP10.49□□□□□ -0.73
CROCCP2-206ENST00000639594 LCA10Q71F78 164 aa10.47□□□□□ -0.73
CROCCP2-206ENST00000639594 RYR1P21817 5038 aa10.46□□□□□ -0.74
CROCCP2-206ENST00000639594 KIAA1109Q2LD37 5005 aa10.44□□□□□ -0.74
CROCCP2-206ENST00000639594 PKHD1L1Q86WI1 4243 aa10.42□□□□□ -0.74
CROCCP2-206ENST00000639594 SPINK7P58062 85 aa10.41□□□□□ -0.74
CROCCP2-206ENST00000639594 CDC42SE1Q9NRR8 79 aa10.38□□□□□ -0.75
CROCCP2-206ENST00000639594 C7orf65Q6ZTY9 151 aa10.37□□□□□ -0.75
CROCCP2-206ENST00000639594 C9orf92A6NGG3 77 aa10.36□□□□□ -0.75
CROCCP2-206ENST00000639594 KRTAP17-1Q9BYP8 105 aa10.35□□□□□ -0.75
CROCCP2-206ENST00000639594 SPTSSBQ8NFR3 76 aa10.33□□□□□ -0.76
CROCCP2-206ENST00000639594 PMAIP1Q13794 54 aa10.32□□□□□ -0.76
CROCCP2-206ENST00000639594 ATP11AUNQ6ZP68 121 aa10.31□□□□□ -0.76
CROCCP2-206ENST00000639594 A8MUU9 505 aa10.29□□□□□ -0.76
CROCCP2-206ENST00000639594 C20orf166-AS1Q96NR2 134 aa10.29□□□□□ -0.76
CROCCP2-206ENST00000639594 Q8N1X5 172 aa10.28□□□□□ -0.76
CROCCP2-206ENST00000639594 LRP1Q07954 4544 aaKnown RBP10.27□□□□□ -0.77
CROCCP2-206ENST00000639594 A0A1B0GU69 56 aa10.26□□□□□ -0.77
CROCCP2-206ENST00000639594 Q5VSD8 79 aa10.26□□□□□ -0.77
CROCCP2-206ENST00000639594 FLG2Q5D862 2391 aaPredicted RBP10.2□□□□□ -0.78
CROCCP2-206ENST00000639594 A6NN06 94 aa10.16□□□□□ -0.78
CROCCP2-206ENST00000639594 TNXBP22105 4242 aa10.15□□□□□ -0.79
CROCCP2-206ENST00000639594 FAT3Q8TDW7 4589 aa10.14□□□□□ -0.79
CROCCP2-206ENST00000639594 MYCBP2O75592 4640 aa10.12□□□□□ -0.79
CROCCP2-206ENST00000639594 KRTAP3-1Q9BYR8 98 aa10.09□□□□□ -0.79
CROCCP2-206ENST00000639594 KRTAP10-8P60410 259 aa10.08□□□□□ -0.8
CROCCP2-206ENST00000639594 SPATA8Q6RVD6 105 aa10.07□□□□□ -0.8
CROCCP2-206ENST00000639594 UQCR11O14957 56 aa10.05□□□□□ -0.8
CROCCP2-206ENST00000639594 KTN1-AS1Q86SY8 53 aa10.05□□□□□ -0.8
CROCCP2-206ENST00000639594 MIR22HGQ0VDD5 57 aa10.02□□□□□ -0.8
CROCCP2-206ENST00000639594 KRTAP4-5Q9BYR2 181 aa10.01□□□□□ -0.81
CROCCP2-206ENST00000639594 BIRC6Q9NR09 4857 aa9.99□□□□□ -0.81
CROCCP2-206ENST00000639594 DMBT1Q9UGM3 2413 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms