RNA–Protein interactions for RNA: ENST00000639486.1

KCNMA1-261, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 8,850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-261ENST00000639486 C20orf166-AS1Q96NR2 134 aa9.7□□□□□ -0.86
KCNMA1-261ENST00000639486 KRTAP1-1Q07627 177 aa9.68□□□□□ -0.86
KCNMA1-261ENST00000639486 ATMQ13315 3056 aa9.63□□□□□ -0.87
KCNMA1-261ENST00000639486 NF1P21359 2839 aa9.63□□□□□ -0.87
KCNMA1-261ENST00000639486 WDFY3Q8IZQ1 3526 aa9.62□□□□□ -0.87
KCNMA1-261ENST00000639486 TNRC18O15417 2968 aaPredicted RBP9.62□□□□□ -0.87
KCNMA1-261ENST00000639486 FLNCQ14315 2725 aa9.61□□□□□ -0.87
KCNMA1-261ENST00000639486 SPEGQ15772 3267 aa9.6□□□□□ -0.87
KCNMA1-261ENST00000639486 CFAP47Q6ZTR5 3102 aa9.59□□□□□ -0.87
KCNMA1-261ENST00000639486 NIPBLQ6KC79 2804 aaeCLIP9.57□□□□□ -0.88
KCNMA1-261ENST00000639486 SZT2Q5T011 3432 aa9.56□□□□□ -0.88
KCNMA1-261ENST00000639486 A8MU10 97 aa9.55□□□□□ -0.88
KCNMA1-261ENST00000639486 KRTAP1-5Q9BYS1 174 aa9.55□□□□□ -0.88
KCNMA1-261ENST00000639486 TENM1Q9UKZ4 2725 aa9.55□□□□□ -0.88
KCNMA1-261ENST00000639486 PDZD2O15018 2839 aa9.52□□□□□ -0.88
KCNMA1-261ENST00000639486 A8MUU9 505 aa9.51□□□□□ -0.89
KCNMA1-261ENST00000639486 NOTCH2NLQ7Z3S9 236 aa9.49□□□□□ -0.89
KCNMA1-261ENST00000639486 RPS29P62273 56 aaKnown RBP9.49□□□□□ -0.89
KCNMA1-261ENST00000639486 TGP01266 2768 aa9.48□□□□□ -0.89
KCNMA1-261ENST00000639486 Q5VSD8 79 aa9.47□□□□□ -0.89
KCNMA1-261ENST00000639486 KRTAP11-1Q8IUC1 163 aa9.45□□□□□ -0.9
KCNMA1-261ENST00000639486 SPTBN5Q9NRC6 3674 aaKnown RBP9.45□□□□□ -0.9
KCNMA1-261ENST00000639486 C10orf95Q9H7T3 257 aa9.41□□□□□ -0.9
KCNMA1-261ENST00000639486 TENM3Q9P273 2699 aa9.41□□□□□ -0.9
KCNMA1-261ENST00000639486 DCHS2Q6V1P9 2916 aa9.41□□□□□ -0.9
KCNMA1-261ENST00000639486 CELSR1Q9NYQ6 3014 aa9.4□□□□□ -0.91
KCNMA1-261ENST00000639486 FBN2P35556 2912 aa9.39□□□□□ -0.91
KCNMA1-261ENST00000639486 KRTAP10-1P60331 282 aa9.38□□□□□ -0.91
KCNMA1-261ENST00000639486 ZANQ9Y493 2812 aa9.37□□□□□ -0.91
KCNMA1-261ENST00000639486 TNP1P09430 55 aa9.35□□□□□ -0.91
KCNMA1-261ENST00000639486 PP632Q6XCG6 107 aa9.35□□□□□ -0.91
KCNMA1-261ENST00000639486 SRRM2Q9UQ35 2752 aaKnown RBP9.34□□□□□ -0.91
KCNMA1-261ENST00000639486 KRTAP10-2P60368 255 aa9.34□□□□□ -0.91
KCNMA1-261ENST00000639486 MYO15AQ9UKN7 3530 aa9.31□□□□□ -0.92
KCNMA1-261ENST00000639486 ASPMQ8IZT6 3477 aa9.3□□□□□ -0.92
KCNMA1-261ENST00000639486 LAMA5O15230 3695 aa9.26□□□□□ -0.93
KCNMA1-261ENST00000639486 EYSQ5T1H1 3165 aa9.22□□□□□ -0.93
KCNMA1-261ENST00000639486 MXRA5Q9NR99 2828 aa9.18□□□□□ -0.94
KCNMA1-261ENST00000639486 HRNRQ86YZ3 2850 aaPredicted RBP9.18□□□□□ -0.94
KCNMA1-261ENST00000639486 KRTAP13-1Q8IUC0 172 aa9.13□□□□□ -0.95
KCNMA1-261ENST00000639486 Q6ZRN7 208 aaPredicted RBP9.12□□□□□ -0.95
KCNMA1-261ENST00000639486 H0YAA0 97 aa9.1□□□□□ -0.95
KCNMA1-261ENST00000639486 P0C880 135 aa9.09□□□□□ -0.95
KCNMA1-261ENST00000639486 LOC400499M0QZD8 3231 aa9.08□□□□□ -0.96
KCNMA1-261ENST00000639486 KRTAP7-1Q8IUC3 87 aa9.06□□□□□ -0.96
KCNMA1-261ENST00000639486 KRTAP13-2Q52LG2 175 aa9.05□□□□□ -0.96
KCNMA1-261ENST00000639486 DMDP11532 3685 aa9.05□□□□□ -0.96
KCNMA1-261ENST00000639486 ZFHX3Q15911 3703 aa9.04□□□□□ -0.96
KCNMA1-261ENST00000639486 SPENQ96T58 3664 aaKnown RBP9.02□□□□□ -0.97
KCNMA1-261ENST00000639486 NBPF19A0A087WUL8 3843 aa9.01□□□□□ -0.97
KCNMA1-261ENST00000639486 DCHS1Q96JQ0 3298 aa9.01□□□□□ -0.97
KCNMA1-261ENST00000639486 SMG1Q96Q15 3661 aaKnown RBP8.99□□□□□ -0.97
KCNMA1-261ENST00000639486 VWFP04275 2813 aa8.98□□□□□ -0.97
KCNMA1-261ENST00000639486 CSMD1Q96PZ7 3565 aa8.96□□□□□ -0.97
KCNMA1-261ENST00000639486 ZFHX4Q86UP3 3567 aa8.96□□□□□ -0.97
KCNMA1-261ENST00000639486 RELNP78509 3460 aa8.94□□□□□ -0.98
KCNMA1-261ENST00000639486 PKD1L1Q8TDX9 2849 aa8.88□□□□□ -0.99
KCNMA1-261ENST00000639486 KRTAP10-8P60410 259 aa8.8□□□□□ -1
KCNMA1-261ENST00000639486 TENM4Q6N022 2769 aa8.79□□□□□ -1
KCNMA1-261ENST00000639486 COL7A1Q02388 2944 aa8.75□□□□□ -1.01
KCNMA1-261ENST00000639486 TENM2Q9NT68 2774 aa8.72□□□□□ -1.01
KCNMA1-261ENST00000639486 PRO2289Q9P1D8 64 aa8.65□□□□□ -1.02
KCNMA1-261ENST00000639486 XP32Q5T750 250 aa8.63□□□□□ -1.03
KCNMA1-261ENST00000639486 VPS13CQ709C8 3753 aa8.56□□□□□ -1.04
KCNMA1-261ENST00000639486 MEGF8Q7Z7M0 2845 aa8.55□□□□□ -1.04
KCNMA1-261ENST00000639486 CUBNO60494 3623 aa8.53□□□□□ -1.04
KCNMA1-261ENST00000639486 SVEP1Q4LDE5 3571 aa8.52□□□□□ -1.05
KCNMA1-261ENST00000639486 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
KCNMA1-261ENST00000639486 TPRXLQ17RH7 258 aa8.48□□□□□ -1.05
KCNMA1-261ENST00000639486 KRTAP12-2P59991 146 aa8.42□□□□□ -1.06
KCNMA1-261ENST00000639486 AKAP9Q99996 3911 aa8.41□□□□□ -1.06
KCNMA1-261ENST00000639486 KRTAP13-4Q3LI77 160 aa8.38□□□□□ -1.07
KCNMA1-261ENST00000639486 A0A1B0GVY2 172 aa8.38□□□□□ -1.07
KCNMA1-261ENST00000639486 KRTAP13-3Q3SY46 172 aa8.36□□□□□ -1.07
KCNMA1-261ENST00000639486 FBN1P35555 2871 aaKnown RBP8.34□□□□□ -1.07
KCNMA1-261ENST00000639486 FBN3Q75N90 2809 aa8.33□□□□□ -1.08
KCNMA1-261ENST00000639486 KRTAP10-10P60014 251 aa8.33□□□□□ -1.08
KCNMA1-261ENST00000639486 MUC3AQ02505 3323 aa8.27□□□□□ -1.09
KCNMA1-261ENST00000639486 OTOGQ6ZRI0 2925 aa8.27□□□□□ -1.09
KCNMA1-261ENST00000639486 TRRAPQ9Y4A5 3859 aa8.27□□□□□ -1.09
KCNMA1-261ENST00000639486 KRTAP12-1P59990 96 aa8.22□□□□□ -1.09
KCNMA1-261ENST00000639486 INE1O15225 51 aa8.21□□□□□ -1.1
KCNMA1-261ENST00000639486 CSMD3Q7Z407 3707 aa8.12□□□□□ -1.11
KCNMA1-261ENST00000639486 CSMD2Q7Z408 3487 aa8.12□□□□□ -1.11
KCNMA1-261ENST00000639486 BSNQ9UPA5 3926 aa8.03□□□□□ -1.12
KCNMA1-261ENST00000639486 KRTAP15-1Q3LI76 137 aa8.01□□□□□ -1.13
KCNMA1-261ENST00000639486 KRTAP21-3Q3LHN1 58 aa7.97□□□□□ -1.13
KCNMA1-261ENST00000639486 KRTAP3-1Q9BYR8 98 aa7.81□□□□□ -1.16
KCNMA1-261ENST00000639486 ALMS1Q8TCU4 4167 aa7.78□□□□□ -1.16
KCNMA1-261ENST00000639486 KRTAP10-6P60371 365 aaPredicted RBP7.77□□□□□ -1.17
KCNMA1-261ENST00000639486 ZNF469Q96JG9 3925 aaPredicted RBP7.52□□□□□ -1.21
KCNMA1-261ENST00000639486 KRTAP23-1A1A580 65 aa7.51□□□□□ -1.21
KCNMA1-261ENST00000639486 KRTAP10-12P60413 245 aa7.51□□□□□ -1.21
KCNMA1-261ENST00000639486 LYSTQ99698 3801 aa7.49□□□□□ -1.21
KCNMA1-261ENST00000639486 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.23
KCNMA1-261ENST00000639486 CMYA5Q8N3K9 4069 aa7.37□□□□□ -1.23
KCNMA1-261ENST00000639486 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
KCNMA1-261ENST00000639486 KRTAP12-3P60328 96 aa7.3□□□□□ -1.24
KCNMA1-261ENST00000639486 CRCT1Q9UGL9 99 aa7.22□□□□□ -1.25
KCNMA1-261ENST00000639486 FRAS1Q86XX4 4008 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms