RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 SPCS1Q9Y6A9 102 aa7.94□□□□□ -1.14
PTPRVP-204ENST00000639439 RBM3P98179 157 aaKnown RBP7.93□□□□□ -1.14
PTPRVP-204ENST00000639439 DEFB116Q30KQ4 102 aa7.92□□□□□ -1.14
PTPRVP-204ENST00000639439 DSCR8Q96T75 97 aa7.92□□□□□ -1.14
PTPRVP-204ENST00000639439 IGHV6-1A0A0B4J1U7 121 aa7.91□□□□□ -1.14
PTPRVP-204ENST00000639439 C21orf62-AS1Q17RA5 79 aa7.91□□□□□ -1.14
PTPRVP-204ENST00000639439 VPS25Q9BRG1 176 aa7.91□□□□□ -1.14
PTPRVP-204ENST00000639439 K7EP34 96 aa7.9□□□□□ -1.14
PTPRVP-204ENST00000639439 NOTCH2NLQ7Z3S9 236 aa7.9□□□□□ -1.14
PTPRVP-204ENST00000639439 C8orf87E5RJ46 101 aa7.89□□□□□ -1.15
PTPRVP-204ENST00000639439 A0A1B0GVX0 72 aa7.87□□□□□ -1.15
PTPRVP-204ENST00000639439 C9JAW5 83 aa7.87□□□□□ -1.15
PTPRVP-204ENST00000639439 BAALC-AS2P0C853 105 aa7.87□□□□□ -1.15
PTPRVP-204ENST00000639439 GTF2H5Q6ZYL4 71 aa7.87□□□□□ -1.15
PTPRVP-204ENST00000639439 FAM236DA0A1B0GTK5 79 aa7.86□□□□□ -1.15
PTPRVP-204ENST00000639439 J3KT08 172 aa7.86□□□□□ -1.15
PTPRVP-204ENST00000639439 FAM236CP0DP71 79 aa7.86□□□□□ -1.15
PTPRVP-204ENST00000639439 RBM12B-AS1Q9P1G2 102 aa7.85□□□□□ -1.15
PTPRVP-204ENST00000639439 A0A1B0GV90 55 aa7.84□□□□□ -1.15
PTPRVP-204ENST00000639439 MTURNQ8N3F0 131 aa7.83□□□□□ -1.16
PTPRVP-204ENST00000639439 MPLKIPQ8TAP9 179 aa7.82□□□□□ -1.16
PTPRVP-204ENST00000639439 HRES1P13985 223 aa7.81□□□□□ -1.16
PTPRVP-204ENST00000639439 Q6ZQT0 140 aa7.81□□□□□ -1.16
PTPRVP-204ENST00000639439 KRTAP9-8Q9BYQ0 159 aa7.81□□□□□ -1.16
PTPRVP-204ENST00000639439 A0A1B0GW54 56 aa7.8□□□□□ -1.16
PTPRVP-204ENST00000639439 JMJD7-PLA2G4BH0Y9G9 81 aa7.8□□□□□ -1.16
PTPRVP-204ENST00000639439 H3BT86 120 aa7.8□□□□□ -1.16
PTPRVP-204ENST00000639439 NDUFB1O75438 58 aa7.79□□□□□ -1.16
PTPRVP-204ENST00000639439 PDE6GP18545 87 aa7.77□□□□□ -1.17
PTPRVP-204ENST00000639439 ZCCHC13Q8WW36 166 aaKnown RBP7.77□□□□□ -1.17
PTPRVP-204ENST00000639439 PRO0461Q9UI25 63 aa7.77□□□□□ -1.17
PTPRVP-204ENST00000639439 LOC110117498A0A087WWA1 95 aa7.76□□□□□ -1.17
PTPRVP-204ENST00000639439 SMCPP49901 116 aaPredicted RBP7.76□□□□□ -1.17
PTPRVP-204ENST00000639439 F8W1H4 67 aa7.75□□□□□ -1.17
PTPRVP-204ENST00000639439 Q8N9P0 234 aaPredicted RBP7.73□□□□□ -1.17
PTPRVP-204ENST00000639439 A8MWP4 228 aa7.72□□□□□ -1.17
PTPRVP-204ENST00000639439 SPINK7P58062 85 aa7.71□□□□□ -1.18
PTPRVP-204ENST00000639439 USH2AO75445 5202 aa7.71□□□□□ -1.18
PTPRVP-204ENST00000639439 C8orf17Q9NRJ1 99 aa7.7□□□□□ -1.18
PTPRVP-204ENST00000639439 MT2AP02795 61 aa7.69□□□□□ -1.18
PTPRVP-204ENST00000639439 C14orf132Q9NPU4 83 aa7.68□□□□□ -1.18
PTPRVP-204ENST00000639439 IGKV3D-7A0A0C4DH55 119 aa7.67□□□□□ -1.18
PTPRVP-204ENST00000639439 NREPQ16612 68 aa7.66□□□□□ -1.18
PTPRVP-204ENST00000639439 ETDBQ3ZM63 59 aa7.66□□□□□ -1.18
PTPRVP-204ENST00000639439 SSPOA2VEC9 5147 aa7.66□□□□□ -1.18
PTPRVP-204ENST00000639439 Q6ZVQ6 151 aa7.65□□□□□ -1.18
PTPRVP-204ENST00000639439 PRR15Q8IV56 129 aa7.64□□□□□ -1.19
PTPRVP-204ENST00000639439 MT1FP04733 61 aa7.62□□□□□ -1.19
PTPRVP-204ENST00000639439 KRTAP10-10P60014 251 aa7.62□□□□□ -1.19
PTPRVP-204ENST00000639439 WFDC13Q8IUB5 93 aa7.6□□□□□ -1.19
PTPRVP-204ENST00000639439 TMEM254Q8TBM7 123 aa7.59□□□□□ -1.19
PTPRVP-204ENST00000639439 MRPL34Q9BQ48 92 aaKnown RBP7.58□□□□□ -1.2
PTPRVP-204ENST00000639439 MMP24-AS1A0A0U1RRL7 71 aa7.57□□□□□ -1.2
PTPRVP-204ENST00000639439 KRTAP9-3Q9BYQ3 159 aa7.57□□□□□ -1.2
PTPRVP-204ENST00000639439 hDV103S1A0JD37 113 aa7.54□□□□□ -1.2
PTPRVP-204ENST00000639439 LCE2BO14633 110 aa7.54□□□□□ -1.2
PTPRVP-204ENST00000639439 K7EQZ3 153 aa7.52□□□□□ -1.21
PTPRVP-204ENST00000639439 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.51□□□□□ -1.21
PTPRVP-204ENST00000639439 BPY2O14599 106 aa7.51□□□□□ -1.21
PTPRVP-204ENST00000639439 NDUFS5O43920 106 aa7.51□□□□□ -1.21
PTPRVP-204ENST00000639439 FCGBPQ9Y6R7 5405 aaPredicted RBP7.49□□□□□ -1.21
PTPRVP-204ENST00000639439 J3QR89 54 aa7.46□□□□□ -1.22
PTPRVP-204ENST00000639439 LINC00846Q9NV44 126 aa7.46□□□□□ -1.22
PTPRVP-204ENST00000639439 ACYP1P07311 99 aa7.45□□□□□ -1.22
PTPRVP-204ENST00000639439 H1FX-AS1Q4G0G2 97 aa7.45□□□□□ -1.22
PTPRVP-204ENST00000639439 KRTAP19-1Q8IUB9 90 aa7.45□□□□□ -1.22
PTPRVP-204ENST00000639439 FAM240AA0A1B0GVK7 77 aa7.44□□□□□ -1.22
PTPRVP-204ENST00000639439 KRTAP9-7A8MTY7 169 aa7.44□□□□□ -1.22
PTPRVP-204ENST00000639439 UBL5Q9BZL1 73 aa7.44□□□□□ -1.22
PTPRVP-204ENST00000639439 C7orf65Q6ZTY9 151 aa7.43□□□□□ -1.22
PTPRVP-204ENST00000639439 IGKV2D-30A0A075B6S6 120 aa7.42□□□□□ -1.22
PTPRVP-204ENST00000639439 IGKV2-30P06310 120 aa7.42□□□□□ -1.22
PTPRVP-204ENST00000639439 CASC2Q6XLA1 102 aa7.41□□□□□ -1.22
PTPRVP-204ENST00000639439 Q5W150 140 aa7.4□□□□□ -1.22
PTPRVP-204ENST00000639439 HCG22E2RYF7 251 aa7.38□□□□□ -1.23
PTPRVP-204ENST00000639439 K7ERU9 68 aa7.38□□□□□ -1.23
PTPRVP-204ENST00000639439 Q8N9L7 120 aa7.38□□□□□ -1.23
PTPRVP-204ENST00000639439 CXCL6P80162 114 aa7.36□□□□□ -1.23
PTPRVP-204ENST00000639439 KRTAP19-6Q3LI70 58 aa7.32□□□□□ -1.24
PTPRVP-204ENST00000639439 LINC00643Q86TS7 51 aa7.3□□□□□ -1.24
PTPRVP-204ENST00000639439 C4orf26Q17RF5 130 aa7.29□□□□□ -1.24
PTPRVP-204ENST00000639439 ATP5EP2Q5VTU8 51 aa7.28□□□□□ -1.24
PTPRVP-204ENST00000639439 MACF1Q9UPN3 7388 aaKnown RBP7.26□□□□□ -1.25
PTPRVP-204ENST00000639439 SYNE2Q8WXH0 6885 aaKnown RBP7.21□□□□□ -1.26
PTPRVP-204ENST00000639439 HIST1H4AP62805 103 aaKnown RBP7.21□□□□□ -1.26
PTPRVP-204ENST00000639439 TP53AIP1Q9HCN2 124 aa7.2□□□□□ -1.26
PTPRVP-204ENST00000639439 C5orf47Q569G3 176 aa7.18□□□□□ -1.26
PTPRVP-204ENST00000639439 S4R3F8 94 aa7.17□□□□□ -1.26
PTPRVP-204ENST00000639439 MT-ATP8P03928 68 aa7.16□□□□□ -1.26
PTPRVP-204ENST00000639439 C1orf64Q8NEQ6 169 aa7.16□□□□□ -1.26
PTPRVP-204ENST00000639439 KRTAP3-1Q9BYR8 98 aa7.16□□□□□ -1.26
PTPRVP-204ENST00000639439 A0A087WVE0 104 aa7.14□□□□□ -1.27
PTPRVP-204ENST00000639439 FAM236AA0A1B0GUQ0 79 aa7.14□□□□□ -1.27
PTPRVP-204ENST00000639439 FAM236BA0A1B0GV22 79 aa7.14□□□□□ -1.27
PTPRVP-204ENST00000639439 CSAG1Q6PB30 78 aa7.14□□□□□ -1.27
PTPRVP-204ENST00000639439 IMUPQ9GZP8 106 aa7.1□□□□□ -1.27
PTPRVP-204ENST00000639439 LCA10Q71F78 164 aa7.09□□□□□ -1.27
PTPRVP-204ENST00000639439 CYP4F30PQ9H0H9 118 aa7.04□□□□□ -1.28
PTPRVP-204ENST00000639439 KRTAP6-3Q3LI67 103 aa7.02□□□□□ -1.29
PTPRVP-204ENST00000639439 SPRR2GQ9BYE4 73 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms