RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 WDFY4Q6ZS81 3184 aa2.56□□□□□ -2
SCN3A-209ENST00000639244 MRPL34Q9BQ48 92 aaKnown RBP2.56□□□□□ -2
SCN3A-209ENST00000639244 FAM168BA1KXE4 195 aa2.56□□□□□ -2
SCN3A-209ENST00000639244 Q6ZRX8 168 aa2.55□□□□□ -2
SCN3A-209ENST00000639244 COL7A1Q02388 2944 aa2.55□□□□□ -2
SCN3A-209ENST00000639244 Q8N377 158 aa2.55□□□□□ -2
SCN3A-209ENST00000639244 R4GN34 69 aa2.54□□□□□ -2
SCN3A-209ENST00000639244 GVQW2A0A096LPI5 108 aaPredicted RBP2.53□□□□□ -2
SCN3A-209ENST00000639244 TENM3Q9P273 2699 aa2.53□□□□□ -2
SCN3A-209ENST00000639244 ASPMQ8IZT6 3477 aa2.53□□□□□ -2
SCN3A-209ENST00000639244 DMDP11532 3685 aa2.53□□□□□ -2
SCN3A-209ENST00000639244 TYMSOSQ8TAI1 123 aa2.52□□□□□ -2.01
SCN3A-209ENST00000639244 ADGRG4Q8IZF6 3080 aa2.52□□□□□ -2.01
SCN3A-209ENST00000639244 COX6B2Q6YFQ2 88 aa2.51□□□□□ -2.01
SCN3A-209ENST00000639244 KLK9Q2XQG4 91 aa2.51□□□□□ -2.01
SCN3A-209ENST00000639244 FBN2P35556 2912 aa2.5□□□□□ -2.01
SCN3A-209ENST00000639244 Q8N1X5 172 aa2.5□□□□□ -2.01
SCN3A-209ENST00000639244 ZANQ9Y493 2812 aa2.5□□□□□ -2.01
SCN3A-209ENST00000639244 EYSQ5T1H1 3165 aa2.5□□□□□ -2.01
SCN3A-209ENST00000639244 MMP24-AS1A0A0U1RRL7 71 aa2.49□□□□□ -2.01
SCN3A-209ENST00000639244 DCHS1Q96JQ0 3298 aa2.49□□□□□ -2.01
SCN3A-209ENST00000639244 C9orf92A6NGG3 77 aa2.49□□□□□ -2.01
SCN3A-209ENST00000639244 IGFL1Q6UW32 110 aa2.48□□□□□ -2.01
SCN3A-209ENST00000639244 APLNQ9ULZ1 77 aa2.48□□□□□ -2.01
SCN3A-209ENST00000639244 PRO2289Q9P1D8 64 aa2.48□□□□□ -2.01
SCN3A-209ENST00000639244 PLAC4Q8WY50 150 aa2.48□□□□□ -2.01
SCN3A-209ENST00000639244 A0A0D9SG42 100 aa2.47□□□□□ -2.01
SCN3A-209ENST00000639244 GIG44P09565 113 aaPredicted RBP2.46□□□□□ -2.02
SCN3A-209ENST00000639244 SPENQ96T58 3664 aaKnown RBP2.45□□□□□ -2.02
SCN3A-209ENST00000639244 H0YAA0 97 aa2.45□□□□□ -2.02
SCN3A-209ENST00000639244 ALMS1Q8TCU4 4167 aa2.45□□□□□ -2.02
SCN3A-209ENST00000639244 SMR3BP02814 79 aaPredicted RBP2.44□□□□□ -2.02
SCN3A-209ENST00000639244 RPL37P61927 97 aaKnown RBP2.44□□□□□ -2.02
SCN3A-209ENST00000639244 FBN1P35555 2871 aaKnown RBP2.44□□□□□ -2.02
SCN3A-209ENST00000639244 LOC400499M0QZD8 3231 aa2.44□□□□□ -2.02
SCN3A-209ENST00000639244 LAMA5O15230 3695 aa2.43□□□□□ -2.02
SCN3A-209ENST00000639244 KRTAP24-1Q3LI83 254 aa2.43□□□□□ -2.02
SCN3A-209ENST00000639244 ZFHX4Q86UP3 3567 aa2.43□□□□□ -2.02
SCN3A-209ENST00000639244 KRTAP10-11P60412 298 aa2.42□□□□□ -2.02
SCN3A-209ENST00000639244 H1FX-AS1Q4G0G2 97 aa2.42□□□□□ -2.02
SCN3A-209ENST00000639244 Q6ZSA8 131 aa2.4□□□□□ -2.03
SCN3A-209ENST00000639244 KRTAP10-3P60369 221 aa2.39□□□□□ -2.03
SCN3A-209ENST00000639244 INE1O15225 51 aa2.39□□□□□ -2.03
SCN3A-209ENST00000639244 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
SCN3A-209ENST00000639244 CSMD1Q96PZ7 3565 aa2.38□□□□□ -2.03
SCN3A-209ENST00000639244 RELNP78509 3460 aa2.38□□□□□ -2.03
SCN3A-209ENST00000639244 TPRXLQ17RH7 258 aa2.37□□□□□ -2.03
SCN3A-209ENST00000639244 SPRR1AP35321 89 aa2.37□□□□□ -2.03
SCN3A-209ENST00000639244 SMG1Q96Q15 3661 aaKnown RBP2.36□□□□□ -2.03
SCN3A-209ENST00000639244 TENM4Q6N022 2769 aa2.36□□□□□ -2.03
SCN3A-209ENST00000639244 K7EIL1 84 aa2.36□□□□□ -2.03
SCN3A-209ENST00000639244 CUBNO60494 3623 aa2.35□□□□□ -2.03
SCN3A-209ENST00000639244 H3BNG1 76 aa2.35□□□□□ -2.03
SCN3A-209ENST00000639244 Q6ZRN7 208 aaPredicted RBP2.34□□□□□ -2.04
SCN3A-209ENST00000639244 C10orf95Q9H7T3 257 aa2.33□□□□□ -2.04
SCN3A-209ENST00000639244 MUC3AQ02505 3323 aa2.33□□□□□ -2.04
SCN3A-209ENST00000639244 SVEP1Q4LDE5 3571 aa2.32□□□□□ -2.04
SCN3A-209ENST00000639244 SPRR1BP22528 89 aa2.31□□□□□ -2.04
SCN3A-209ENST00000639244 KRTAP13-3Q3SY46 172 aa2.29□□□□□ -2.04
SCN3A-209ENST00000639244 NBPF19A0A087WUL8 3843 aa2.28□□□□□ -2.04
SCN3A-209ENST00000639244 M0R2T5 61 aa2.27□□□□□ -2.05
SCN3A-209ENST00000639244 KRTAP1-3Q8IUG1 177 aa2.26□□□□□ -2.05
SCN3A-209ENST00000639244 AKAP9Q99996 3911 aa2.26□□□□□ -2.05
SCN3A-209ENST00000639244 S4R3F8 94 aa2.25□□□□□ -2.05
SCN3A-209ENST00000639244 KRTAP3-3Q9BYR6 98 aa2.24□□□□□ -2.05
SCN3A-209ENST00000639244 KRTAP3-2Q9BYR7 98 aa2.24□□□□□ -2.05
SCN3A-209ENST00000639244 KRTAP1-1Q07627 177 aa2.24□□□□□ -2.05
SCN3A-209ENST00000639244 XP32Q5T750 250 aa2.23□□□□□ -2.05
SCN3A-209ENST00000639244 KRTAP12-2P59991 146 aa2.23□□□□□ -2.05
SCN3A-209ENST00000639244 KRTAP1-5Q9BYS1 174 aa2.23□□□□□ -2.05
SCN3A-209ENST00000639244 CSMD2Q7Z408 3487 aa2.2□□□□□ -2.06
SCN3A-209ENST00000639244 KRTAP10-2P60368 255 aa2.19□□□□□ -2.06
SCN3A-209ENST00000639244 M0QZ58 72 aa2.18□□□□□ -2.06
SCN3A-209ENST00000639244 VPS13CQ709C8 3753 aa2.17□□□□□ -2.06
SCN3A-209ENST00000639244 KRTAP10-1P60331 282 aa2.16□□□□□ -2.06
SCN3A-209ENST00000639244 CSMD3Q7Z407 3707 aa2.16□□□□□ -2.06
SCN3A-209ENST00000639244 Q5VSD8 79 aa2.16□□□□□ -2.06
SCN3A-209ENST00000639244 FBN3Q75N90 2809 aa2.15□□□□□ -2.07
SCN3A-209ENST00000639244 BSNQ9UPA5 3926 aa2.13□□□□□ -2.07
SCN3A-209ENST00000639244 KRTAP3-1Q9BYR8 98 aa2.12□□□□□ -2.07
SCN3A-209ENST00000639244 KRTAP7-1Q8IUC3 87 aa2.09□□□□□ -2.07
SCN3A-209ENST00000639244 KRTAP10-8P60410 259 aa2.07□□□□□ -2.08
SCN3A-209ENST00000639244 KRTAP13-2Q52LG2 175 aa2.06□□□□□ -2.08
SCN3A-209ENST00000639244 TRRAPQ9Y4A5 3859 aa2.06□□□□□ -2.08
SCN3A-209ENST00000639244 KRTAP12-1P59990 96 aa2.05□□□□□ -2.08
SCN3A-209ENST00000639244 LYSTQ99698 3801 aa2.05□□□□□ -2.08
SCN3A-209ENST00000639244 KRTAP13-1Q8IUC0 172 aa2.05□□□□□ -2.08
SCN3A-209ENST00000639244 A0A1B0GVY2 172 aa2.04□□□□□ -2.08
SCN3A-209ENST00000639244 KRTAP13-4Q3LI77 160 aa2.03□□□□□ -2.09
SCN3A-209ENST00000639244 KRTAP10-6P60371 365 aaPredicted RBP2.02□□□□□ -2.09
SCN3A-209ENST00000639244 TNP1P09430 55 aa1.98□□□□□ -2.09
SCN3A-209ENST00000639244 SPRR5A0A1B0GTR4 108 aa1.98□□□□□ -2.09
SCN3A-209ENST00000639244 LCE2AQ5TA79 106 aaPredicted RBP1.95□□□□□ -2.1
SCN3A-209ENST00000639244 LCE2CQ5TA81 110 aa1.94□□□□□ -2.1
SCN3A-209ENST00000639244 ANK2Q01484 3957 aa1.94□□□□□ -2.1
SCN3A-209ENST00000639244 LCE2DQ5TA82 110 aaPredicted RBP1.94□□□□□ -2.1
SCN3A-209ENST00000639244 ZNF469Q96JG9 3925 aaPredicted RBP1.92□□□□□ -2.1
SCN3A-209ENST00000639244 RPS29P62273 56 aaKnown RBP1.91□□□□□ -2.1
SCN3A-209ENST00000639244 KRTAP1-4P0C5Y4 121 aa1.91□□□□□ -2.1
SCN3A-209ENST00000639244 DNAH3Q8TD57 4116 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms