RNA–Protein interactions for RNA: ENST00000638991.1

KCNMA1-248, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 11,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-248ENST00000638991 KRTAP7-1Q8IUC3 87 aa5.14□□□□□ -1.59
KCNMA1-248ENST00000638991 SRRM2Q9UQ35 2752 aaKnown RBP5.13□□□□□ -1.59
KCNMA1-248ENST00000638991 LAMA1P25391 3075 aa5.13□□□□□ -1.59
KCNMA1-248ENST00000638991 VWFP04275 2813 aa5.12□□□□□ -1.59
KCNMA1-248ENST00000638991 COL12A1Q99715 3063 aa5.12□□□□□ -1.59
KCNMA1-248ENST00000638991 UTRNP46939 3433 aa5.12□□□□□ -1.59
KCNMA1-248ENST00000638991 R4GN34 69 aa5.12□□□□□ -1.59
KCNMA1-248ENST00000638991 REV3LO60673 3130 aa5.1□□□□□ -1.59
KCNMA1-248ENST00000638991 TENM2Q9NT68 2774 aa5.1□□□□□ -1.59
KCNMA1-248ENST00000638991 FREM2Q5SZK8 3169 aa5.08□□□□□ -1.6
KCNMA1-248ENST00000638991 MKI67P46013 3256 aaKnown RBP5.06□□□□□ -1.6
KCNMA1-248ENST00000638991 KRTAP13-1Q8IUC0 172 aa5.05□□□□□ -1.6
KCNMA1-248ENST00000638991 BOD1L1Q8NFC6 3051 aa5.05□□□□□ -1.6
KCNMA1-248ENST00000638991 Q6ZRN7 208 aaPredicted RBP5.04□□□□□ -1.6
KCNMA1-248ENST00000638991 ADGRG4Q8IZF6 3080 aa5.04□□□□□ -1.6
KCNMA1-248ENST00000638991 KRTAP25-1Q3LHN0 102 aa5.04□□□□□ -1.6
KCNMA1-248ENST00000638991 KRTAP13-2Q52LG2 175 aa5.02□□□□□ -1.61
KCNMA1-248ENST00000638991 KRTAP16-1A8MUX0 517 aa4.97□□□□□ -1.61
KCNMA1-248ENST00000638991 LAMA3Q16787 3333 aa4.97□□□□□ -1.61
KCNMA1-248ENST00000638991 DMXL1Q9Y485 3027 aa4.97□□□□□ -1.61
KCNMA1-248ENST00000638991 RPS29P62273 56 aaKnown RBP4.97□□□□□ -1.61
KCNMA1-248ENST00000638991 PLAC4Q8WY50 150 aa4.96□□□□□ -1.62
KCNMA1-248ENST00000638991 C20orf166-AS1Q96NR2 134 aa4.94□□□□□ -1.62
KCNMA1-248ENST00000638991 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
KCNMA1-248ENST00000638991 A0A1B0GVY2 172 aa4.9□□□□□ -1.62
KCNMA1-248ENST00000638991 C10orf95Q9H7T3 257 aa4.89□□□□□ -1.63
KCNMA1-248ENST00000638991 FBN1P35555 2871 aaKnown RBP4.88□□□□□ -1.63
KCNMA1-248ENST00000638991 A8MUU9 505 aa4.87□□□□□ -1.63
KCNMA1-248ENST00000638991 BRCA2P51587 3418 aa4.87□□□□□ -1.63
KCNMA1-248ENST00000638991 UNC80Q8N2C7 3258 aa4.83□□□□□ -1.64
KCNMA1-248ENST00000638991 COL6A3P12111 3177 aa4.82□□□□□ -1.64
KCNMA1-248ENST00000638991 XIRP2A4UGR9 3374 aa4.79□□□□□ -1.64
KCNMA1-248ENST00000638991 CELSR1Q9NYQ6 3014 aa4.78□□□□□ -1.64
KCNMA1-248ENST00000638991 H0YAA0 97 aa4.78□□□□□ -1.64
KCNMA1-248ENST00000638991 CFAP47Q6ZTR5 3102 aa4.77□□□□□ -1.65
KCNMA1-248ENST00000638991 FBN3Q75N90 2809 aa4.77□□□□□ -1.65
KCNMA1-248ENST00000638991 KRTAP1-4P0C5Y4 121 aa4.74□□□□□ -1.65
KCNMA1-248ENST00000638991 COL7A1Q02388 2944 aa4.72□□□□□ -1.65
KCNMA1-248ENST00000638991 CELSR3Q9NYQ7 3312 aa4.69□□□□□ -1.66
KCNMA1-248ENST00000638991 TNP1P09430 55 aa4.67□□□□□ -1.66
KCNMA1-248ENST00000638991 EYSQ5T1H1 3165 aa4.67□□□□□ -1.66
KCNMA1-248ENST00000638991 KRTAP10-8P60410 259 aa4.66□□□□□ -1.66
KCNMA1-248ENST00000638991 MEGF8Q7Z7M0 2845 aa4.66□□□□□ -1.66
KCNMA1-248ENST00000638991 P0C880 135 aa4.66□□□□□ -1.66
KCNMA1-248ENST00000638991 PP632Q6XCG6 107 aa4.66□□□□□ -1.66
KCNMA1-248ENST00000638991 XP32Q5T750 250 aa4.66□□□□□ -1.66
KCNMA1-248ENST00000638991 KRTAP13-3Q3SY46 172 aa4.62□□□□□ -1.67
KCNMA1-248ENST00000638991 OTOGQ6ZRI0 2925 aa4.6□□□□□ -1.67
KCNMA1-248ENST00000638991 VCANP13611 3396 aa4.54□□□□□ -1.68
KCNMA1-248ENST00000638991 MYO15AQ9UKN7 3530 aa4.53□□□□□ -1.68
KCNMA1-248ENST00000638991 KRTAP10-10P60014 251 aa4.52□□□□□ -1.69
KCNMA1-248ENST00000638991 SZT2Q5T011 3432 aa4.5□□□□□ -1.69
KCNMA1-248ENST00000638991 TPRXLQ17RH7 258 aa4.49□□□□□ -1.69
KCNMA1-248ENST00000638991 CDH23Q9H251 3354 aa4.49□□□□□ -1.69
KCNMA1-248ENST00000638991 USP34Q70CQ2 3546 aa4.48□□□□□ -1.69
KCNMA1-248ENST00000638991 KRTAP21-3Q3LHN1 58 aa4.46□□□□□ -1.7
KCNMA1-248ENST00000638991 KRTAP12-2P59991 146 aa4.43□□□□□ -1.7
KCNMA1-248ENST00000638991 DCHS1Q96JQ0 3298 aa4.4□□□□□ -1.71
KCNMA1-248ENST00000638991 DNAH14Q0VDD8 3507 aa4.39□□□□□ -1.71
KCNMA1-248ENST00000638991 SPTBN5Q9NRC6 3674 aaKnown RBP4.38□□□□□ -1.71
KCNMA1-248ENST00000638991 LOC400499M0QZD8 3231 aa4.36□□□□□ -1.71
KCNMA1-248ENST00000638991 SPEGQ15772 3267 aa4.35□□□□□ -1.71
KCNMA1-248ENST00000638991 KRTAP3-1Q9BYR8 98 aa4.35□□□□□ -1.71
KCNMA1-248ENST00000638991 KRTAP12-1P59990 96 aa4.35□□□□□ -1.71
KCNMA1-248ENST00000638991 KRTAP13-4Q3LI77 160 aa4.32□□□□□ -1.72
KCNMA1-248ENST00000638991 KRTAP10-6P60371 365 aaPredicted RBP4.27□□□□□ -1.73
KCNMA1-248ENST00000638991 PRO2289Q9P1D8 64 aa4.27□□□□□ -1.73
KCNMA1-248ENST00000638991 CRCT1Q9UGL9 99 aa4.26□□□□□ -1.73
KCNMA1-248ENST00000638991 ZFHX3Q15911 3703 aa4.25□□□□□ -1.73
KCNMA1-248ENST00000638991 TRRAPQ9Y4A5 3859 aa4.19□□□□□ -1.74
KCNMA1-248ENST00000638991 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
KCNMA1-248ENST00000638991 WDFY3Q8IZQ1 3526 aa4.17□□□□□ -1.74
KCNMA1-248ENST00000638991 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
KCNMA1-248ENST00000638991 KRTAP3-2Q9BYR7 98 aa4.14□□□□□ -1.75
KCNMA1-248ENST00000638991 DMDP11532 3685 aa4.1□□□□□ -1.75
KCNMA1-248ENST00000638991 NBPF19A0A087WUL8 3843 aa4.09□□□□□ -1.75
KCNMA1-248ENST00000638991 ANK3Q12955 4377 aaKnown RBP4.08□□□□□ -1.76
KCNMA1-248ENST00000638991 KRTAP3-3Q9BYR6 98 aa4.08□□□□□ -1.76
KCNMA1-248ENST00000638991 RELNP78509 3460 aa4.06□□□□□ -1.76
KCNMA1-248ENST00000638991 ZFHX4Q86UP3 3567 aa4.06□□□□□ -1.76
KCNMA1-248ENST00000638991 SMG1Q96Q15 3661 aaKnown RBP4.03□□□□□ -1.76
KCNMA1-248ENST00000638991 LAMA5O15230 3695 aa4.02□□□□□ -1.77
KCNMA1-248ENST00000638991 MT1HL1P0DM35 61 aa4.01□□□□□ -1.77
KCNMA1-248ENST00000638991 SPENQ96T58 3664 aaKnown RBP3.97□□□□□ -1.77
KCNMA1-248ENST00000638991 KRTAP4-5Q9BYR2 181 aa3.96□□□□□ -1.77
KCNMA1-248ENST00000638991 KRTAP10-4P60372 401 aaPredicted RBP3.95□□□□□ -1.78
KCNMA1-248ENST00000638991 INE1O15225 51 aa3.94□□□□□ -1.78
KCNMA1-248ENST00000638991 VPS13CQ709C8 3753 aa3.93□□□□□ -1.78
KCNMA1-248ENST00000638991 ALMS1Q8TCU4 4167 aa3.91□□□□□ -1.78
KCNMA1-248ENST00000638991 CSMD1Q96PZ7 3565 aa3.9□□□□□ -1.79
KCNMA1-248ENST00000638991 KRTAP10-12P60413 245 aa3.9□□□□□ -1.79
KCNMA1-248ENST00000638991 AKAP9Q99996 3911 aa3.9□□□□□ -1.79
KCNMA1-248ENST00000638991 HUWE1Q7Z6Z7 4374 aaKnown RBP3.89□□□□□ -1.79
KCNMA1-248ENST00000638991 CUBNO60494 3623 aa3.89□□□□□ -1.79
KCNMA1-248ENST00000638991 DNAH2Q9P225 4427 aa3.88□□□□□ -1.79
KCNMA1-248ENST00000638991 LORP23490 312 aaPredicted RBP3.86□□□□□ -1.79
KCNMA1-248ENST00000638991 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
KCNMA1-248ENST00000638991 ASPMQ8IZT6 3477 aa3.82□□□□□ -1.8
KCNMA1-248ENST00000638991 DNAH10Q8IVF4 4471 aa3.81□□□□□ -1.8
KCNMA1-248ENST00000638991 DNAH11Q96DT5 4516 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms