RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 KRTAP9-3Q9BYQ3 159 aa8.32□□□□□ -1.08
SMN2-216ENST00000638794 A0A1B0GVX0 72 aa8.3□□□□□ -1.08
SMN2-216ENST00000638794 C8orf87E5RJ46 101 aa8.3□□□□□ -1.08
SMN2-216ENST00000638794 VPS25Q9BRG1 176 aa8.3□□□□□ -1.08
SMN2-216ENST00000638794 KRTAP19-1Q8IUB9 90 aa8.29□□□□□ -1.08
SMN2-216ENST00000638794 RBM3P98179 157 aaKnown RBP8.25□□□□□ -1.09
SMN2-216ENST00000638794 PYY3Q5JQD4 70 aa8.25□□□□□ -1.09
SMN2-216ENST00000638794 MTURNQ8N3F0 131 aa8.25□□□□□ -1.09
SMN2-216ENST00000638794 ZCCHC13Q8WW36 166 aaKnown RBP8.25□□□□□ -1.09
SMN2-216ENST00000638794 DSCR8Q96T75 97 aa8.24□□□□□ -1.09
SMN2-216ENST00000638794 SPINK7P58062 85 aa8.22□□□□□ -1.09
SMN2-216ENST00000638794 J3KT08 172 aa8.2□□□□□ -1.1
SMN2-216ENST00000638794 SCGB1C2P0DMR2 95 aa8.2□□□□□ -1.1
SMN2-216ENST00000638794 C9JAW5 83 aa8.18□□□□□ -1.1
SMN2-216ENST00000638794 Q6ZQT0 140 aa8.18□□□□□ -1.1
SMN2-216ENST00000638794 UQCR10Q9UDW1 63 aa8.18□□□□□ -1.1
SMN2-216ENST00000638794 Q8N9P0 234 aaPredicted RBP8.17□□□□□ -1.1
SMN2-216ENST00000638794 BAALC-AS2P0C853 105 aa8.16□□□□□ -1.1
SMN2-216ENST00000638794 C21orf62-AS1Q17RA5 79 aa8.16□□□□□ -1.1
SMN2-216ENST00000638794 NDUFB1O75438 58 aa8.14□□□□□ -1.11
SMN2-216ENST00000638794 WFDC13Q8IUB5 93 aa8.13□□□□□ -1.11
SMN2-216ENST00000638794 MACF1Q9UPN3 7388 aaKnown RBP8.13□□□□□ -1.11
SMN2-216ENST00000638794 C8orf17Q9NRJ1 99 aa8.12□□□□□ -1.11
SMN2-216ENST00000638794 A8MWP4 228 aa8.11□□□□□ -1.11
SMN2-216ENST00000638794 LYRM7Q5U5X0 104 aa8.1□□□□□ -1.11
SMN2-216ENST00000638794 SYNE2Q8WXH0 6885 aaKnown RBP8.09□□□□□ -1.12
SMN2-216ENST00000638794 IGKV3D-7A0A0C4DH55 119 aa8.08□□□□□ -1.12
SMN2-216ENST00000638794 KRTAP19-6Q3LI70 58 aa8.08□□□□□ -1.12
SMN2-216ENST00000638794 LOC110117498A0A087WWA1 95 aa8.05□□□□□ -1.12
SMN2-216ENST00000638794 A0A1B0GW54 56 aa8.05□□□□□ -1.12
SMN2-216ENST00000638794 JMJD7-PLA2G4BH0Y9G9 81 aa8.05□□□□□ -1.12
SMN2-216ENST00000638794 Q6ZVQ6 151 aa8.05□□□□□ -1.12
SMN2-216ENST00000638794 LINC00846Q9NV44 126 aa8.05□□□□□ -1.12
SMN2-216ENST00000638794 ATXN8Q156A1 80 aa8.04□□□□□ -1.12
SMN2-216ENST00000638794 NAA38Q9BRA0 125 aaKnown RBP8.02□□□□□ -1.13
SMN2-216ENST00000638794 PRR15Q8IV56 129 aa8.01□□□□□ -1.13
SMN2-216ENST00000638794 C14orf132Q9NPU4 83 aa8.01□□□□□ -1.13
SMN2-216ENST00000638794 PDE6GP18545 87 aa8□□□□□ -1.13
SMN2-216ENST00000638794 TMA7Q9Y2S6 64 aaKnown RBP8□□□□□ -1.13
SMN2-216ENST00000638794 MMP24-AS1A0A0U1RRL7 71 aa7.97□□□□□ -1.13
SMN2-216ENST00000638794 TMEM254Q8TBM7 123 aa7.97□□□□□ -1.13
SMN2-216ENST00000638794 MRPL34Q9BQ48 92 aaKnown RBP7.97□□□□□ -1.13
SMN2-216ENST00000638794 NREPQ16612 68 aa7.96□□□□□ -1.14
SMN2-216ENST00000638794 M0R143 59 aa7.95□□□□□ -1.14
SMN2-216ENST00000638794 H1FX-AS1Q4G0G2 97 aa7.95□□□□□ -1.14
SMN2-216ENST00000638794 hDV103S1A0JD37 113 aa7.91□□□□□ -1.14
SMN2-216ENST00000638794 K7EQZ3 153 aa7.91□□□□□ -1.14
SMN2-216ENST00000638794 NDUFS5O43920 106 aa7.9□□□□□ -1.14
SMN2-216ENST00000638794 IGKV2D-30A0A075B6S6 120 aa7.87□□□□□ -1.15
SMN2-216ENST00000638794 IGKV2-30P06310 120 aa7.87□□□□□ -1.15
SMN2-216ENST00000638794 Q5W150 140 aa7.84□□□□□ -1.15
SMN2-216ENST00000638794 C7orf65Q6ZTY9 151 aa7.83□□□□□ -1.16
SMN2-216ENST00000638794 KRTAP6-3Q3LI67 103 aa7.82□□□□□ -1.16
SMN2-216ENST00000638794 BPY2O14599 106 aa7.8□□□□□ -1.16
SMN2-216ENST00000638794 H3BT86 120 aa7.77□□□□□ -1.17
SMN2-216ENST00000638794 BATFQ16520 125 aa7.76□□□□□ -1.17
SMN2-216ENST00000638794 C4orf26Q17RF5 130 aa7.76□□□□□ -1.17
SMN2-216ENST00000638794 Q8N9L7 120 aa7.75□□□□□ -1.17
SMN2-216ENST00000638794 HCG22E2RYF7 251 aa7.74□□□□□ -1.17
SMN2-216ENST00000638794 CASC2Q6XLA1 102 aa7.74□□□□□ -1.17
SMN2-216ENST00000638794 KRTAP3-3Q9BYR6 98 aa7.74□□□□□ -1.17
SMN2-216ENST00000638794 KRTAP3-2Q9BYR7 98 aa7.74□□□□□ -1.17
SMN2-216ENST00000638794 SMIM6P0DI80 62 aa7.72□□□□□ -1.17
SMN2-216ENST00000638794 C9orf118A6NHY6 69 aa7.7□□□□□ -1.18
SMN2-216ENST00000638794 TSTD3H0UI37 97 aa7.69□□□□□ -1.18
SMN2-216ENST00000638794 C5orf47Q569G3 176 aa7.69□□□□□ -1.18
SMN2-216ENST00000638794 A0A1W2PPM0 123 aa7.68□□□□□ -1.18
SMN2-216ENST00000638794 CXCL6P80162 114 aa7.68□□□□□ -1.18
SMN2-216ENST00000638794 FAM236AA0A1B0GUQ0 79 aa7.67□□□□□ -1.18
SMN2-216ENST00000638794 FAM236BA0A1B0GV22 79 aa7.67□□□□□ -1.18
SMN2-216ENST00000638794 TAX1BP3O14907 124 aa7.66□□□□□ -1.18
SMN2-216ENST00000638794 KRTAP3-1Q9BYR8 98 aa7.64□□□□□ -1.19
SMN2-216ENST00000638794 MT1BP07438 61 aa7.63□□□□□ -1.19
SMN2-216ENST00000638794 A6NN06 94 aa7.62□□□□□ -1.19
SMN2-216ENST00000638794 S4R3F8 94 aa7.62□□□□□ -1.19
SMN2-216ENST00000638794 NEBP20929 6669 aa7.61□□□□□ -1.19
SMN2-216ENST00000638794 Q5VV11 94 aa7.59□□□□□ -1.19
SMN2-216ENST00000638794 MUC12Q9UKN1 5478 aa7.59□□□□□ -1.19
SMN2-216ENST00000638794 CSAG1Q6PB30 78 aa7.58□□□□□ -1.2
SMN2-216ENST00000638794 LCA10Q71F78 164 aa7.58□□□□□ -1.2
SMN2-216ENST00000638794 SPRR2GQ9BYE4 73 aa7.58□□□□□ -1.2
SMN2-216ENST00000638794 SMCPP49901 116 aaPredicted RBP7.57□□□□□ -1.2
SMN2-216ENST00000638794 KRTAP19-8Q3LI54 63 aa7.57□□□□□ -1.2
SMN2-216ENST00000638794 C1orf64Q8NEQ6 169 aa7.57□□□□□ -1.2
SMN2-216ENST00000638794 SPCS1Q9Y6A9 102 aa7.56□□□□□ -1.2
SMN2-216ENST00000638794 UBL5Q9BZL1 73 aa7.54□□□□□ -1.2
SMN2-216ENST00000638794 KRTAP10-5P60370 271 aa7.49□□□□□ -1.21
SMN2-216ENST00000638794 KLKP1Q107X0 134 aa7.47□□□□□ -1.21
SMN2-216ENST00000638794 PRO0461Q9UI25 63 aa7.47□□□□□ -1.21
SMN2-216ENST00000638794 TP53AIP1Q9HCN2 124 aa7.46□□□□□ -1.22
SMN2-216ENST00000638794 LOC105371267A0A1B0GV96 52 aa7.4□□□□□ -1.22
SMN2-216ENST00000638794 K7EP34 96 aa7.38□□□□□ -1.23
SMN2-216ENST00000638794 KRTAP5-9P26371 169 aa7.38□□□□□ -1.23
SMN2-216ENST00000638794 CYP4F30PQ9H0H9 118 aa7.37□□□□□ -1.23
SMN2-216ENST00000638794 A0A087WVE0 104 aa7.36□□□□□ -1.23
SMN2-216ENST00000638794 KMT2DO14686 5537 aa7.35□□□□□ -1.23
SMN2-216ENST00000638794 KRTAP20-1Q3LI63 56 aa7.35□□□□□ -1.23
SMN2-216ENST00000638794 COL5A1-AS1Q5SY13 56 aa7.35□□□□□ -1.23
SMN2-216ENST00000638794 CRIPTQ9P021 101 aa7.34□□□□□ -1.23
SMN2-216ENST00000638794 IMUPQ9GZP8 106 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms