RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 C1orf195Q5TG92 126 aa12.43□□□□□ -0.42
SCARB2-212ENST00000638663 CASC2Q6XLA1 102 aa12.42□□□□□ -0.42
SCARB2-212ENST00000638663 MMP24-AS1A0A0U1RRL7 71 aa12.41□□□□□ -0.42
SCARB2-212ENST00000638663 KRTAP29-1A8MX34 341 aaPredicted RBP12.41□□□□□ -0.42
SCARB2-212ENST00000638663 SPAG11AQ6PDA7 123 aa12.41□□□□□ -0.42
SCARB2-212ENST00000638663 OCR1Q9BZK8 76 aa12.4□□□□□ -0.42
SCARB2-212ENST00000638663 C8orf17Q9NRJ1 99 aa12.39□□□□□ -0.43
SCARB2-212ENST00000638663 Q8N1X5 172 aa12.37□□□□□ -0.43
SCARB2-212ENST00000638663 hDV103S1A0JD37 113 aa12.35□□□□□ -0.43
SCARB2-212ENST00000638663 NOTCH2NLQ7Z3S9 236 aa12.35□□□□□ -0.43
SCARB2-212ENST00000638663 RPS29P62273 56 aaKnown RBP12.35□□□□□ -0.43
SCARB2-212ENST00000638663 C20orf197Q8N268 126 aa12.29□□□□□ -0.44
SCARB2-212ENST00000638663 LRP1Q07954 4544 aaKnown RBP12.28□□□□□ -0.44
SCARB2-212ENST00000638663 KRTAP10-8P60410 259 aa12.26□□□□□ -0.45
SCARB2-212ENST00000638663 FLG2Q5D862 2391 aaPredicted RBP12.24□□□□□ -0.45
SCARB2-212ENST00000638663 C8orf87E5RJ46 101 aa12.23□□□□□ -0.45
SCARB2-212ENST00000638663 CYSTM1Q9H1C7 97 aa12.23□□□□□ -0.45
SCARB2-212ENST00000638663 TMEM254Q8TBM7 123 aa12.23□□□□□ -0.45
SCARB2-212ENST00000638663 MRPL34Q9BQ48 92 aaKnown RBP12.23□□□□□ -0.45
SCARB2-212ENST00000638663 LINC00313P59037 77 aa12.21□□□□□ -0.45
SCARB2-212ENST00000638663 SNURFQ9Y675 71 aa12.21□□□□□ -0.46
SCARB2-212ENST00000638663 TNXBP22105 4242 aa12.19□□□□□ -0.46
SCARB2-212ENST00000638663 NDUFS5O43920 106 aa12.19□□□□□ -0.46
SCARB2-212ENST00000638663 FAT3Q8TDW7 4589 aa12.18□□□□□ -0.46
SCARB2-212ENST00000638663 KLKP1Q107X0 134 aa12.15□□□□□ -0.46
SCARB2-212ENST00000638663 C5orf47Q569G3 176 aa12.15□□□□□ -0.46
SCARB2-212ENST00000638663 RETNLBQ9BQ08 111 aa12.15□□□□□ -0.46
SCARB2-212ENST00000638663 A0A0U1RQV1 116 aa12.13□□□□□ -0.47
SCARB2-212ENST00000638663 KRTAP4-5Q9BYR2 181 aa12.13□□□□□ -0.47
SCARB2-212ENST00000638663 TP53AIP1Q9HCN2 124 aa12.11□□□□□ -0.47
SCARB2-212ENST00000638663 MYCBP2O75592 4640 aa12.09□□□□□ -0.47
SCARB2-212ENST00000638663 KRTAP16-1A8MUX0 517 aa12.09□□□□□ -0.47
SCARB2-212ENST00000638663 H0Y9P7 68 aa12.09□□□□□ -0.47
SCARB2-212ENST00000638663 MT1HL1P0DM35 61 aa12.09□□□□□ -0.47
SCARB2-212ENST00000638663 MP68P56378 58 aa12.08□□□□□ -0.48
SCARB2-212ENST00000638663 TRAV22A0A0B4J277 110 aa12.06□□□□□ -0.48
SCARB2-212ENST00000638663 H7BZZ5 65 aa12.03□□□□□ -0.48
SCARB2-212ENST00000638663 Q8N9P0 234 aaPredicted RBP12.03□□□□□ -0.48
SCARB2-212ENST00000638663 LINC00208Q96KT6 92 aa12.03□□□□□ -0.48
SCARB2-212ENST00000638663 DMBT1Q9UGM3 2413 aaPredicted RBP12.03□□□□□ -0.48
SCARB2-212ENST00000638663 ZCCHC13Q8WW36 166 aaKnown RBP12.02□□□□□ -0.49
SCARB2-212ENST00000638663 C9orf92A6NGG3 77 aa11.99□□□□□ -0.49
SCARB2-212ENST00000638663 NDUFC1O43677 76 aa11.99□□□□□ -0.49
SCARB2-212ENST00000638663 OXTP01178 125 aa11.99□□□□□ -0.49
SCARB2-212ENST00000638663 BIRC6Q9NR09 4857 aa11.99□□□□□ -0.49
SCARB2-212ENST00000638663 Q5W150 140 aa11.98□□□□□ -0.49
SCARB2-212ENST00000638663 C1orf64Q8NEQ6 169 aa11.98□□□□□ -0.49
SCARB2-212ENST00000638663 H3BPC8 53 aa11.97□□□□□ -0.49
SCARB2-212ENST00000638663 TMEM258P61165 79 aa11.97□□□□□ -0.49
SCARB2-212ENST00000638663 KRTAP13-3Q3SY46 172 aa11.92□□□□□ -0.5
SCARB2-212ENST00000638663 FP248Q71RG6 208 aaPredicted RBP11.88□□□□□ -0.51
SCARB2-212ENST00000638663 HERC2O95714 4834 aa11.87□□□□□ -0.51
SCARB2-212ENST00000638663 ABCA13Q86UQ4 5058 aa11.86□□□□□ -0.51
SCARB2-212ENST00000638663 FAM236DA0A1B0GTK5 79 aa11.86□□□□□ -0.51
SCARB2-212ENST00000638663 FAM236CP0DP71 79 aa11.86□□□□□ -0.51
SCARB2-212ENST00000638663 IGLV7-46A0A075B6I9 117 aa11.83□□□□□ -0.52
SCARB2-212ENST00000638663 C20orf166-AS1Q96NR2 134 aa11.82□□□□□ -0.52
SCARB2-212ENST00000638663 LOC101927531A0A1B0GV80 90 aa11.8□□□□□ -0.52
SCARB2-212ENST00000638663 A8MUU9 505 aa11.8□□□□□ -0.52
SCARB2-212ENST00000638663 PCOTHQ58A44 107 aa11.8□□□□□ -0.52
SCARB2-212ENST00000638663 PRR4Q16378 134 aa11.76□□□□□ -0.53
SCARB2-212ENST00000638663 CYP4F30PQ9H0H9 118 aa11.74□□□□□ -0.53
SCARB2-212ENST00000638663 ATP5EP56381 51 aaPredicted RBP11.73□□□□□ -0.53
SCARB2-212ENST00000638663 J3QL48 77 aa11.72□□□□□ -0.53
SCARB2-212ENST00000638663 IGKV2-30P06310 120 aa11.72□□□□□ -0.53
SCARB2-212ENST00000638663 Q75L30 129 aa11.7□□□□□ -0.54
SCARB2-212ENST00000638663 IGKV2D-30A0A075B6S6 120 aa11.68□□□□□ -0.54
SCARB2-212ENST00000638663 SPANXA2-OT1Q8N9U9 137 aa11.67□□□□□ -0.54
SCARB2-212ENST00000638663 XP32Q5T750 250 aa11.64□□□□□ -0.55
SCARB2-212ENST00000638663 SERP1Q9Y6X1 66 aa11.6□□□□□ -0.55
SCARB2-212ENST00000638663 RPS28P62857 69 aaKnown RBP11.58□□□□□ -0.55
SCARB2-212ENST00000638663 RPL37P61927 97 aaKnown RBP11.58□□□□□ -0.56
SCARB2-212ENST00000638663 HRES1P13985 223 aa11.57□□□□□ -0.56
SCARB2-212ENST00000638663 C7orf65Q6ZTY9 151 aa11.57□□□□□ -0.56
SCARB2-212ENST00000638663 TPRXLQ17RH7 258 aa11.56□□□□□ -0.56
SCARB2-212ENST00000638663 ATP11AUNQ6ZP68 121 aa11.55□□□□□ -0.56
SCARB2-212ENST00000638663 SPINK7P58062 85 aa11.47□□□□□ -0.57
SCARB2-212ENST00000638663 LPAP08519 4548 aa11.42□□□□□ -0.58
SCARB2-212ENST00000638663 PCLOQ9Y6V0 5065 aa11.41□□□□□ -0.58
SCARB2-212ENST00000638663 DMAC1Q96GE9 116 aa11.39□□□□□ -0.59
SCARB2-212ENST00000638663 COA5Q86WW8 74 aa11.38□□□□□ -0.59
SCARB2-212ENST00000638663 C4orf26Q17RF5 130 aa11.37□□□□□ -0.59
SCARB2-212ENST00000638663 LRP2P98164 4655 aa11.36□□□□□ -0.59
SCARB2-212ENST00000638663 ACYP2P14621 99 aa11.33□□□□□ -0.6
SCARB2-212ENST00000638663 SMIM26A0A096LP01 95 aa11.31□□□□□ -0.6
SCARB2-212ENST00000638663 A8MUN3 132 aa11.21□□□□□ -0.62
SCARB2-212ENST00000638663 KRTAP3-1Q9BYR8 98 aa11.2□□□□□ -0.62
SCARB2-212ENST00000638663 CHKB-CPT1BH3BT56 60 aa11.19□□□□□ -0.62
SCARB2-212ENST00000638663 MPLKIPQ8TAP9 179 aa11.18□□□□□ -0.62
SCARB2-212ENST00000638663 HERC1Q15751 4861 aa11.18□□□□□ -0.62
SCARB2-212ENST00000638663 COX6B2Q6YFQ2 88 aa11.17□□□□□ -0.62
SCARB2-212ENST00000638663 SEC61BP60468 96 aaKnown RBP11.16□□□□□ -0.62
SCARB2-212ENST00000638663 Q1T7F1 81 aa11.07□□□□□ -0.64
SCARB2-212ENST00000638663 HMCN2Q8NDA2 5059 aa11.05□□□□□ -0.64
SCARB2-212ENST00000638663 V9GYY9 64 aa10.99□□□□□ -0.65
SCARB2-212ENST00000638663 KRTAP4-1Q9BYQ7 146 aa10.98□□□□□ -0.65
SCARB2-212ENST00000638663 MUC17Q685J3 4493 aa10.96□□□□□ -0.65
SCARB2-212ENST00000638663 RBM12B-AS1Q9P1G2 102 aa10.95□□□□□ -0.66
SCARB2-212ENST00000638663 PSPHP1O15172 72 aa10.94□□□□□ -0.66
SCARB2-212ENST00000638663 LINC01558Q9Y6Z2 57 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms